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MN096369.1__QDK02688.1__SEA_PHENDRIX_172__00142
Bact-VirMN096369.1__QDK02688.1__SEA_PHENDRIX_172__00142
Identity
- Accession:
- MN096369 ↗
- Kingdom:
- phage
Quality
56.6
mean pLDDT
Taxonomy
TaxID: 2593335
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-71
D2
medium
residues 153-185
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5hkxA04 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.69 | 55.0 | 5.18e-01 | 100.0% | 95.5% |
| 2cklB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.68 | 54.0 | 4.44e-01 | 100.0% | 63.4% |
| 3ddtC00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.67 | 50.0 | 4.78e-01 | 100.0% | 70.5% |
| 2qh7B01 | 3.40.5.90 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › CDGSH iron-sulfur domain, mitoNEET-type | 0.56 | 43.0 | 4.02e-01 | 93.9% | 68.1% |
| 1q1aA02 | 3.30.1600.10 | Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' | 0.56 | 42.0 | 3.06e-01 | 93.9% | 36.9% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3623052 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.90 | 80.0 | 5.30e-01 | 100.0% | 27.5% |
| 3243928 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.88 | 70.0 | 6.96e-01 | 90.9% | 88.6% |
| 3885685 | 904.1.1.11 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-UBP | 0.75 | 58.0 | 5.49e-01 | 100.0% | 71.1% |
| 3874356 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.73 | 57.0 | 5.38e-01 | 100.0% | 77.8% |
| 3580845 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.73 | 55.0 | 5.13e-01 | 100.0% | 72.0% |
| 3529691 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.72 | 56.0 | 5.35e-01 | 100.0% | 73.3% |
| 3746408 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.69 | 52.0 | 4.95e-01 | 97.0% | 75.6% |
| 3357826 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.66 | 52.0 | 4.78e-01 | 97.0% | 84.0% |
| 3935946 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.66 | 52.0 | 4.15e-01 | 100.0% | 52.5% |
| 3895529 | 904.1.1.35 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-UBP_var | 0.64 | 48.0 | 4.65e-01 | 97.0% | 75.6% |
| 3194019 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.64 | 51.0 | 3.96e-01 | 100.0% | 50.6% |
| 3713600 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.64 | 52.0 | 3.92e-01 | 100.0% | 47.8% |
| 3671724 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.62 | 50.0 | 4.32e-01 | 100.0% | 71.7% |