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MN096370.1__QDK02806.1__SEA_SQUIDDLY_55__00055

Bact-Vir

MN096370.1__QDK02806.1__SEA_SQUIDDLY_55__00055

Identity

Accession:
MN096370 ↗
Kingdom:
phage

Quality

88.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 44-131
PDB
Domain cluster: representative
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3n2qA02 3.30.300.190 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.67 49.0 4.48e-01 77.3% 66.4%
2ci8A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.67 41.0 4.85e-01 81.8% 96.4%
3g98A00 3.10.310.40 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.67 59.0 5.48e-01 100.0% 99.1%
3buxB03 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.65 50.0 5.06e-01 97.7% 84.9%
2gk4A00 3.40.50.10300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like 0.64 57.0 4.23e-01 100.0% 97.4%
3ajvC02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.63 41.0 4.15e-01 71.6% 64.8%
3uh0A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.63 54.0 4.86e-01 95.5% 96.8%
1w66A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.63 52.0 3.97e-01 90.9% 98.6%
2l3tA02 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.63 50.0 4.87e-01 87.5% 90.0%
2zyzC00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.63 41.0 4.00e-01 71.6% 60.4%
2xp1A02 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.62 48.0 5.07e-01 84.1% 93.8%
1d4tA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.62 48.0 4.59e-01 85.2% 89.4%
1ym5A01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.61 52.0 4.52e-01 94.3% 87.5%
5ghrA02 3.10.310.30 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.61 53.0 4.75e-01 96.6% 83.2%
4ywrA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.61 52.0 3.91e-01 96.6% 60.1%
1nj1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.61 51.0 4.84e-01 93.2% 100.0%
1xa6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.61 49.0 4.72e-01 89.8% 91.3%
2eo6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.60 47.0 4.49e-01 86.4% 95.4%
4owpB00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.60 50.0 4.06e-01 90.9% 74.7%
1bwzA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.60 51.0 4.53e-01 94.3% 90.6%
1milA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.59 47.0 4.48e-01 85.2% 86.5%
1m61A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.59 52.0 4.93e-01 96.6% 87.5%
1qyaB01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.59 50.0 4.29e-01 94.3% 81.2%
3ednA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.59 50.0 4.38e-01 94.3% 88.8%
2i5bA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.59 50.0 3.63e-01 96.6% 56.5%
2m71A00 3.30.110.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain 0.59 46.0 4.47e-01 84.1% 85.7%
1rpyB00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.59 45.0 4.63e-01 87.5% 87.2%
3ndhA00 3.40.600.30 Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › 0.59 45.0 3.39e-01 81.8% 66.4%
1tm0A01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.59 50.0 4.16e-01 97.7% 85.4%
1nrvA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.58 51.0 4.94e-01 97.7% 88.0%
5khaB01 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.58 50.0 3.67e-01 100.0% 91.9%
2hqsA01 3.40.50.10070 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TolB, N-terminal domain 0.57 48.0 4.20e-01 96.6% 90.1%
6pxcA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.57 49.0 4.69e-01 96.6% 89.4%
2afbB00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.57 49.0 3.40e-01 98.9% 46.9%
1qy9A02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.57 46.0 3.78e-01 88.6% 78.5%
3hxlA02 2.60.40.4290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 42.0 4.21e-01 89.8% 77.8%
3ieyB00 3.40.1350.150 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.56 39.0 3.29e-01 71.6% 44.1%
4euyA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 39.0 4.01e-01 73.9% 100.0%
1ce7A01 3.40.420.10 Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 0.56 45.0 3.73e-01 89.8% 63.0%
3lmlA03 2.60.40.4290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 41.0 4.15e-01 87.5% 80.0%
2diyA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 49.0 4.56e-01 100.0% 99.1%
2crqA01 3.30.110.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain 0.55 41.0 4.19e-01 79.5% 95.3%
3gxwC00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.55 48.0 4.62e-01 98.9% 89.0%
2ablA02 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.54 47.0 4.57e-01 97.7% 90.7%
1ekjA00 3.40.1050.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase 0.54 41.0 3.26e-01 85.2% 81.9%
2ci9B00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.54 46.0 4.50e-01 97.7% 91.0%
2cxhA01 3.40.50.10480 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain 0.54 45.0 3.64e-01 93.2% 78.7%
1tigA00 3.30.110.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain 0.53 41.0 4.17e-01 85.2% 95.5%
1r26A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 45.0 4.18e-01 95.5% 99.1%
1i3zA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.52 44.0 4.29e-01 97.7% 91.3%
6u1vD02 2.40.110.10 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.52 38.0 3.63e-01 78.4% 100.0%
1j5wB01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.52 38.0 3.05e-01 79.5% 81.6%
7c38B01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.52 44.0 3.11e-01 97.7% 35.4%
2gbsA00 3.10.590.10 Alpha Beta › Roll › ph1033 like fold › ph1033 like domains 0.52 42.0 3.64e-01 90.9% 87.6%
3zxoA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.52 35.0 3.20e-01 97.7% 49.6%
2wjwA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 39.0 3.31e-01 85.2% 93.9%
2l2mA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 35.0 3.89e-01 93.2% 90.0%
3hi0A02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.51 38.0 3.05e-01 80.7% 90.7%
3hrgA02 3.30.420.260 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain 0.51 39.0 3.60e-01 83.0% 83.3%
1rypL00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.50 42.0 3.30e-01 97.7% 72.2%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5036583 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.69 62.0 5.43e-01 100.0% 90.0%
3768834 214.1.1.3 a+b two layers › SH2 › SH2 › SH2 › Cbl_N3 0.68 51.0 4.99e-01 97.7% 73.7%
5027632 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.68 59.0 5.26e-01 96.6% 88.0%
4191331 314.1.1.12 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat 0.67 52.0 3.94e-01 84.1% 89.5%
4294157 314.1.1.12 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat 0.67 55.0 4.14e-01 89.8% 99.5%
1511313 214.1.1.3 a+b two layers › SH2 › SH2 › SH2 › Cbl_N3 0.67 49.0 4.95e-01 81.8% 76.7%
5037608 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.66 58.0 5.17e-01 100.0% 86.9%
4962785 314.1.1.12 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat 0.66 53.0 3.85e-01 88.6% 89.8%
4562258 314.1.1.12 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat 0.66 58.0 4.30e-01 100.0% 96.6%
4456886 314.1.1.12 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat 0.65 53.0 4.10e-01 92.0% 98.1%
5013835 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.65 58.0 4.98e-01 100.0% 83.6%
4975616 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.64 58.0 5.03e-01 100.0% 88.9%
3728231 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.64 58.0 4.13e-01 100.0% 44.5%
3970256 2492.1.1.18 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.64 50.0 4.18e-01 83.0% 81.3%
4935393 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.64 56.0 5.02e-01 100.0% 89.1%
3711563 2007.1.4.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain 0.64 56.0 4.33e-01 100.0% 81.0%
5074659 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.64 57.0 4.98e-01 100.0% 85.9%
5066835 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.64 57.0 5.01e-01 100.0% 88.5%
3594194 328.3.1.0 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain 0.64 46.0 3.75e-01 75.0% 75.0%
5041218 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.64 57.0 5.01e-01 100.0% 88.5%
4598421 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.63 52.0 4.61e-01 90.9% 76.2%
5011819 314.1.1.12 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat 0.63 50.0 3.64e-01 87.5% 88.1%
5069330 7575.1.1.4 a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C11 0.63 53.0 4.01e-01 95.5% 46.2%
4058117 286.1.1.1 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase 0.63 51.0 4.39e-01 88.6% 82.9%
4639186 7503.1.1.3 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.63 53.0 4.37e-01 93.2% 78.8%
4137619 286.1.1.2 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.63 50.0 4.47e-01 88.6% 91.5%
3203106 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.63 56.0 4.03e-01 100.0% 43.9%
3596952 7575.1.1.0 a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like 0.62 52.0 3.60e-01 94.3% 26.2%
148219 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.62 54.0 4.86e-01 96.6% 98.4%
3727183 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.62 56.0 4.05e-01 100.0% 46.8%
4978875 286.1.1.2 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.62 50.0 4.46e-01 88.6% 91.5%
3614320 7575.1.1.0 a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like 0.62 54.0 4.12e-01 100.0% 81.8%
4981209 2003.1.1.51 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.62 55.0 4.15e-01 100.0% 55.3%
5027857 225.1.1.7 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 0.62 53.0 4.06e-01 98.9% 70.7%
4249757 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.62 47.0 4.50e-01 81.8% 87.6%
3967702 286.1.1.2 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.62 50.0 4.48e-01 88.6% 89.6%
3279780 2008.1.1.20 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Uma2 0.62 53.0 4.12e-01 96.6% 54.2%
5081860 2003.1.1.51 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.62 54.0 4.13e-01 98.9% 96.3%
5033670 2003.1.1.51 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.62 53.0 4.04e-01 95.5% 95.7%
3271694 314.1.1.0 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.61 51.0 3.83e-01 94.3% 90.6%
4968479 2003.1.1.51 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.61 54.0 4.19e-01 100.0% 93.2%
3624447 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.61 49.0 4.58e-01 87.5% 87.3%
2142345 2008.2.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo 0.61 42.0 4.15e-01 71.6% 66.7%
4389562 7503.1.1.3 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.61 52.0 4.29e-01 94.3% 87.5%
4631930 286.1.1.2 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.61 51.0 4.49e-01 92.0% 90.0%
3414351 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.61 51.0 4.06e-01 92.0% 68.0%
4545906 7503.1.1.3 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.60 52.0 4.46e-01 95.5% 88.6%
3508171 3392.1.1.1 a+b two layers › Cytoplasmic domain of BfpC › Cytoplasmic domain of BfpC › Cytoplasmic domain of BfpC › PAP_PilO 0.60 42.0 3.43e-01 78.4% 38.2%
4217929 286.1.1.2 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.60 49.0 4.15e-01 88.6% 73.8%
3211478 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.60 47.0 4.31e-01 86.4% 76.7%
4209556 314.1.1.12 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat 0.60 48.0 3.64e-01 89.8% 100.0%
3729005 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.60 53.0 3.80e-01 100.0% 43.3%
3727039 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.60 53.0 3.80e-01 100.0% 46.7%
4984818 2003.1.1.51 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.59 52.0 4.08e-01 100.0% 95.0%
3407355 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.59 51.0 4.19e-01 97.7% 84.7%
3953947 286.1.1.2 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.58 47.0 4.32e-01 88.6% 93.9%
3812257 2003.1.6.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like 0.58 47.0 3.82e-01 92.0% 96.1%
4441604 7512.1.1.16 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Capsule_synth 0.57 47.0 3.11e-01 90.9% 96.2%
4660214 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.57 43.0 4.32e-01 80.7% 93.3%
4026783 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.57 43.0 3.85e-01 84.1% 98.5%
3390489 2008.1.1.146 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › EDRF1_N 0.57 41.0 2.75e-01 76.1% 38.6%
3291383 286.1.1.0 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like 0.57 48.0 4.28e-01 93.2% 91.2%
3838198 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.57 45.0 4.39e-01 85.2% 89.5%
4024171 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.56 42.0 4.17e-01 80.7% 85.3%
2322691 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.56 50.0 4.47e-01 98.9% 85.2%
3960260 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.56 43.0 4.06e-01 84.1% 76.4%
3270273 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 41.0 2.40e-01 78.4% 80.8%
4076949 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.55 35.0 3.89e-01 89.8% 81.4%
4391313 328.3.1.1 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.55 42.0 4.08e-01 81.8% 83.0%
4019959 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 49.0 4.03e-01 98.9% 96.2%
3884315 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.55 47.0 2.88e-01 100.0% 23.1%
3266531 234.3.1.0 a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain 0.55 39.0 3.14e-01 73.9% 55.8%
3728854 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.54 36.0 4.02e-01 93.2% 90.8%
3954396 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.54 44.0 4.00e-01 88.6% 70.8%
5011813 2003.1.2.40 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored 0.54 45.0 2.96e-01 93.2% 65.7%
4972530 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.53 44.0 3.47e-01 92.0% 69.5%
4256420 5.1.3.134 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR, BNR_2 0.53 45.0 2.98e-01 94.3% 46.5%
4106397 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 38.0 4.04e-01 98.9% 89.3%
3945413 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.53 45.0 3.69e-01 96.6% 54.7%
3465277 328.3.1.0 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain 0.52 40.0 3.80e-01 84.1% 76.2%
3219023 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.52 44.0 4.29e-01 98.9% 91.0%
4991691 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.51 40.0 3.11e-01 96.6% 34.9%