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MN098326.1__QFG06633.1__CPT_Myduc_010__00010
Bact-VirMN098326.1__QFG06633.1__CPT_Myduc_010__00010
Identity
- Accession:
- MN098326 ↗
- Kingdom:
- phage
Quality
71.6
mean pLDDT
Taxonomy
TaxID: 2650874
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-76
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3viqA00 | 6.10.140.1020 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 36.0 | 2.93e-01 | 81.4% | 29.5% |
| 1jx4A04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.62 | 28.0 | 2.49e-01 | 74.3% | 27.6% |
| 3pm9A04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 28.0 | 2.65e-01 | 80.0% | 32.2% |
| 1kyzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 31.0 | 2.73e-01 | 70.0% | 34.0% |
| 3gw6D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 45.0 | 3.39e-01 | 80.0% | 77.0% |
| 2mcqA01 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.58 | 26.0 | 2.56e-01 | 74.3% | 34.7% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.56 | 28.0 | 2.44e-01 | 80.0% | 27.9% |
| 4mfzA02 | 3.40.630.120 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › | 0.56 | 28.0 | 2.23e-01 | 78.6% | 20.4% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.55 | 26.0 | 2.61e-01 | 82.9% | 38.7% |
| 3r0aA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 43.0 | 3.61e-01 | 92.9% | 50.8% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 44.0 | 3.64e-01 | 90.0% | 58.3% |
| 7a6pB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 39.0 | 3.20e-01 | 87.1% | 57.2% |
| 1gcbA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.50 | 37.0 | 2.34e-01 | 80.0% | 14.0% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3238364 | 109.4.1.32 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G | 0.83 | 41.0 | 2.55e-01 | 91.4% | 9.7% |
| 4945650 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.81 | 38.0 | 3.35e-01 | 88.6% | 33.0% |
| 5072410 | 306.6.1.6 ↗ | a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like › GH3_C | 0.76 | 33.0 | 3.05e-01 | 80.0% | 32.2% |
| 4799073 | 309.1.1.4 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C | 0.75 | 33.0 | 2.94e-01 | 74.3% | 30.6% |
| 3781870 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.74 | 36.0 | 3.40e-01 | 81.4% | 38.8% |
| 3318217 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.72 | 36.0 | 3.43e-01 | 81.4% | 41.2% |
| 3430282 | 601.1.2.68 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › DUF1218 | 0.68 | 50.0 | 3.78e-01 | 78.6% | 92.9% |
| 3550392 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 52.0 | 3.75e-01 | 84.3% | 51.9% |
| 3423775 | 601.16.1.8 ↗ | alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › DUF1218 | 0.64 | 48.0 | 3.72e-01 | 80.0% | 89.0% |
| 4026519 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.64 | 40.0 | 3.24e-01 | 84.3% | 33.3% |
| 3620592 | 6155.1.1.15 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › DUF846 | 0.62 | 38.0 | 3.03e-01 | 100.0% | 30.7% |
| 3924998 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.60 | 48.0 | 3.06e-01 | 87.1% | 32.7% |
| 5068497 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.60 | 45.0 | 3.80e-01 | 81.4% | 93.2% |
| 3587631 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.58 | 38.0 | 2.98e-01 | 80.0% | 34.3% |
| 3213493 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.58 | 46.0 | 3.01e-01 | 87.1% | 34.5% |
| 3329735 | 327.11.2.37 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DEAH11_1st | 0.57 | 25.0 | 2.54e-01 | 74.3% | 35.7% |
| 3603146 | 2008.1.1.95 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DpnII | 0.56 | 42.0 | 2.79e-01 | 80.0% | 50.2% |
| 3501234 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.56 | 44.0 | 2.89e-01 | 90.0% | 31.5% |
| 4028937 | 109.4.1.1255 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, Cnd1 | 0.56 | 41.0 | 2.38e-01 | 81.4% | 8.0% |
| 4002132 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.55 | 45.0 | 2.89e-01 | 88.6% | 52.0% |
| 1834407 | 3218.1.1.1 ↗ | a+b duplicates or obligate multimers › small terminase oligomerization domain › small terminase oligomerization domain › small terminase oligomerization domain › Terminase_2 | 0.55 | 32.0 | 3.10e-01 | 70.0% | 51.3% |
| 3937515 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.55 | 43.0 | 2.81e-01 | 87.1% | 35.2% |
| 3488429 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.54 | 45.0 | 3.32e-01 | 92.9% | 34.6% |
| 3875765 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 40.0 | 2.68e-01 | 84.3% | 26.1% |
| 3517620 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 45.0 | 2.98e-01 | 95.7% | 30.0% |
| 4982514 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.54 | 36.0 | 3.50e-01 | 80.0% | 64.0% |
| 3483425 | 3745.1.1.0 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger | 0.54 | 47.0 | 2.91e-01 | 100.0% | 80.0% |
| 3303720 | 3336.1.1.1 ↗ | alpha complex topology › plant-specific ROP nucleotide exchanger (PRONE) domain › plant-specific ROP nucleotide exchanger (PRONE) domain › plant-specific ROP nucleotide exchanger (PRONE) domain › PRONE | 0.54 | 45.0 | 2.88e-01 | 97.1% | 34.9% |
| 3479321 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.53 | 40.0 | 2.49e-01 | 80.0% | 25.5% |
| 4590279 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 42.0 | 2.81e-01 | 88.6% | 30.6% |
| 4671394 | 109.4.1.939 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_PRP39_C | 0.53 | 37.0 | 2.64e-01 | 74.3% | 50.8% |
| 3223233 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.53 | 42.0 | 2.95e-01 | 87.1% | 28.3% |
| 3485716 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.53 | 44.0 | 3.23e-01 | 92.9% | 33.7% |
| 4017873 | 327.11.2.40 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF31052 | 0.52 | 32.0 | 3.22e-01 | 78.6% | 60.3% |
| 3519143 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.52 | 40.0 | 2.65e-01 | 84.3% | 19.7% |
| 4300924 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.52 | 35.0 | 3.01e-01 | 70.0% | 60.9% |
| 4928248 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 39.0 | 3.15e-01 | 80.0% | 57.7% |
| 3627409 | 6166.1.1.1 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 | 0.51 | 45.0 | 3.24e-01 | 97.1% | 35.0% |
| 3224634 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.51 | 43.0 | 2.80e-01 | 98.6% | 56.5% |
| 3218266 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.51 | 41.0 | 2.70e-01 | 94.3% | 28.7% |
| 5002351 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.51 | 45.0 | 2.84e-01 | 100.0% | 90.7% |
| 4067342 | 5069.1.1.15 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_C_asm | 0.51 | 37.0 | 2.39e-01 | 80.0% | 41.8% |
| 4983447 | 3457.1.1.3 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Arc_PepC_II | 0.50 | 38.0 | 2.67e-01 | 85.7% | 44.5% |
| 2755218 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.50 | 42.0 | 3.02e-01 | 92.9% | 94.7% |