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MN098326.1__QFG06640.1__CPT_Myduc_017__00017

Bact-Vir

MN098326.1__QFG06640.1__CPT_Myduc_017__00017

Identity

Accession:
MN098326 ↗
Kingdom:
phage

Quality

72.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chaseviridae› Myducvirus› Proteus_phage_Myduc

TaxID: 2650874

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-82
PDB
Domain cluster: rep: ON602738.1__UVX30253.1__S13a_00047__00045__D5-68
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 49.0 5.47e-01 92.3% 96.7%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 45.0 4.75e-01 91.0% 74.3%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 40.0 4.53e-01 91.0% 83.9%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 47.0 4.75e-01 93.6% 75.6%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 49.0 5.24e-01 97.4% 93.9%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 47.0 4.89e-01 93.6% 84.3%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 44.0 4.29e-01 91.0% 64.0%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 49.0 5.29e-01 96.2% 98.4%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 48.0 5.08e-01 91.0% 92.5%
1ssfA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 39.0 4.48e-01 92.3% 87.3%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.63 37.0 4.37e-01 92.3% 93.8%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 39.0 4.50e-01 91.0% 92.5%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 40.0 4.21e-01 96.2% 72.5%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 47.0 5.03e-01 93.6% 95.5%
1s1nA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 42.0 4.67e-01 92.3% 93.3%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 45.0 4.87e-01 93.6% 96.9%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.60 42.0 4.45e-01 96.2% 86.4%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 46.0 4.53e-01 100.0% 77.9%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 40.0 4.34e-01 91.0% 88.7%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.59 37.0 4.17e-01 92.3% 90.7%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 35.0 3.49e-01 91.0% 55.3%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 39.0 4.20e-01 92.3% 87.1%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 42.0 4.42e-01 91.0% 88.6%
4bpnW02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.56 29.0 3.38e-01 78.2% 70.6%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 30.0 3.16e-01 82.1% 53.4%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.55 40.0 4.08e-01 94.9% 79.2%
2kjzA01 3.30.720.120 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.55 28.0 3.23e-01 80.8% 64.8%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.55 27.0 2.83e-01 80.8% 45.8%
1fx7B03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.53 41.0 4.16e-01 93.6% 85.0%
3teeA02 2.30.30.760 Mainly Beta › Roll › SH3 type barrels. › 0.52 33.0 3.43e-01 91.0% 67.1%
1hlcA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 45.0 3.84e-01 98.7% 87.6%
3h27A00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.50 36.0 2.31e-01 76.9% 46.9%
2dk7A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.50 33.0 3.47e-01 100.0% 74.0%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3299797 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.71 42.0 4.67e-01 92.3% 76.7%
3037102 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 42.0 4.59e-01 92.3% 74.2%
3930456 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 46.0 4.99e-01 93.6% 83.1%
3372243 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 43.0 4.31e-01 92.3% 62.5%
3574613 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.68 40.0 3.74e-01 92.3% 46.0%
3702154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 44.0 4.52e-01 92.3% 69.3%
5008972 2005.1.1.17 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.68 43.0 2.64e-01 92.3% 10.2%
4279317 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.68 43.0 2.64e-01 92.3% 10.2%
3998022 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.67 40.0 4.58e-01 92.3% 83.6%
3577864 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.67 41.0 3.99e-01 92.3% 55.3%
3404936 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.67 40.0 4.61e-01 91.0% 90.0%
3609597 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.67 39.0 4.38e-01 91.0% 75.0%
3817476 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.67 40.0 4.69e-01 92.3% 92.0%
3372822 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 47.0 4.85e-01 93.6% 77.3%
3684909 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.66 38.0 4.35e-01 91.0% 80.0%
3995431 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.66 55.0 5.59e-01 100.0% 94.7%
3420348 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.65 39.0 4.45e-01 91.0% 83.6%
4191690 4.1.1.98 ↗ beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.65 39.0 4.37e-01 91.0% 79.3%
3494765 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.65 46.0 3.33e-01 93.6% 26.4%
3636812 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.65 46.0 4.98e-01 94.9% 90.8%
3256431 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.65 39.0 3.88e-01 88.5% 57.5%
3898952 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 46.0 4.69e-01 92.3% 77.3%
4844109 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.65 38.0 3.99e-01 91.0% 63.4%
3673317 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 41.0 4.67e-01 91.0% 90.9%
3194818 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 44.0 4.65e-01 91.0% 80.0%
3741020 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 46.0 4.86e-01 97.4% 85.7%
4679625 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 40.0 4.46e-01 92.3% 83.3%
5060347 101.8.1.4 ↗ alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1f 0.64 41.0 2.52e-01 92.3% 10.2%
3554026 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.64 42.0 4.65e-01 92.3% 88.3%
3546607 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.64 38.0 4.36e-01 92.3% 90.0%
3553983 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.64 42.0 4.64e-01 92.3% 88.3%
4027422 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.64 40.0 4.50e-01 91.0% 89.1%
3235419 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 43.0 4.76e-01 92.3% 91.7%
5025104 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 40.0 4.60e-01 94.9% 98.0%
4093354 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 49.0 5.11e-01 93.6% 92.9%
3915732 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 45.0 4.42e-01 93.6% 69.4%
3649741 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.63 39.0 3.98e-01 91.0% 64.0%
4882420 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.63 36.0 4.16e-01 91.0% 84.3%
3993946 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.63 34.0 4.29e-01 70.5% 100.0%
3481770 4.1.1.220 ↗ beta barrels › SH3 › SH3 › SH3 › BAHCC1-like_Tudor 0.62 45.0 4.49e-01 91.0% 75.0%
3326980 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.61 38.0 4.17e-01 91.0% 81.7%
4157193 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.60 41.0 4.28e-01 92.3% 78.6%
4833642 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.60 35.0 4.09e-01 89.7% 95.6%
4026678 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.60 38.0 3.97e-01 92.3% 71.4%
3941962 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.60 38.0 3.66e-01 92.3% 55.6%
5043091 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.59 37.0 3.92e-01 92.3% 72.1%
5050433 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 33.0 3.85e-01 87.2% 88.9%
4226849 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.59 40.0 4.02e-01 92.3% 68.8%
3818428 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.59 42.0 4.28e-01 100.0% 78.7%
3964935 243.4.1.1 ↗ a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like › DsbC_N 0.58 38.0 4.09e-01 84.6% 80.0%
4113537 2.1.1.327 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF27401 0.58 34.0 3.65e-01 85.9% 67.7%
4043931 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.57 30.0 3.32e-01 75.6% 61.7%
3662319 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.57 41.0 4.08e-01 93.6% 75.0%
3968197 243.4.1.1 ↗ a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like › DsbC_N 0.57 34.0 3.90e-01 84.6% 85.5%
3451280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 48.0 3.83e-01 100.0% 92.9%
3624307 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 44.0 4.01e-01 93.6% 78.2%
3435779 809.2.1.0 ↗ a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.52 32.0 3.62e-01 85.9% 85.5%