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MN098327.1__QFG06709.1__CPT_Mulock_007__00007
Bact-VirMN098327.1__QFG06709.1__CPT_Mulock_007__00007
Identity
- Accession:
- MN098327 ↗
- Kingdom:
- phage
Quality
87.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-40
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 38.0 | 2.81e-01 | 100.0% | 22.6% |
| 2yvlA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 40.0 | 2.68e-01 | 79.5% | 38.1% |
| 1cl8A00 | 3.40.580.10 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RI Endonuclease; Chain A › Eco RI Endonuclease, subunit A | 0.52 | 42.0 | 2.61e-01 | 100.0% | 49.8% |
| 5koxA02 | 3.30.70.2450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 39.0 | 3.31e-01 | 100.0% | 82.6% |
| 2hr0B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 3.05e-01 | 97.4% | 84.4% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5001806 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.85 | 75.0 | 7.02e-01 | 100.0% | 81.2% |
| 4982370 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.85 | 70.0 | 7.03e-01 | 100.0% | 92.5% |
| 4460255 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.85 | 74.0 | 6.87e-01 | 100.0% | 78.0% |
| 5038458 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.84 | 75.0 | 6.89e-01 | 100.0% | 78.0% |
| 4951587 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.84 | 74.0 | 6.82e-01 | 100.0% | 78.0% |
| 4593896 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.82 | 72.0 | 6.88e-01 | 100.0% | 86.7% |
| 4057802 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.82 | 70.0 | 6.79e-01 | 100.0% | 86.7% |
| 4939553 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.81 | 69.0 | 6.48e-01 | 100.0% | 78.0% |
| 4934987 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.81 | 66.0 | 6.45e-01 | 100.0% | 84.4% |
| 5068408 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.80 | 67.0 | 6.45e-01 | 97.4% | 84.4% |
| 4419456 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.78 | 65.0 | 6.19e-01 | 100.0% | 81.6% |
| 5066664 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.75 | 62.0 | 6.00e-01 | 100.0% | 88.9% |
| 4200990 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.73 | 60.0 | 5.66e-01 | 100.0% | 80.0% |
| 3573620 | 4.1.1.318 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26085 | 0.66 | 54.0 | 4.87e-01 | 100.0% | 88.3% |
| 4013893 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.57 | 46.0 | 3.45e-01 | 100.0% | 65.8% |
| 4518508 | 4271.1.1.3 ↗ | alpha complex topology › PriB N-terminal domain-like › PriB N-terminal domain-like › PriB N-terminal domain-like › DNA_primase_lrg_N | 0.54 | 43.0 | 2.81e-01 | 100.0% | 22.9% |
| 3581291 | 11.1.5.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › T-box | 0.54 | 40.0 | 2.82e-01 | 100.0% | 67.4% |
| 3285669 | 371.1.1.5 ↗ | few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › DUF1353 | 0.51 | 36.0 | 2.62e-01 | 84.6% | 48.4% |
| 4244646 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.51 | 37.0 | 3.14e-01 | 82.1% | 70.7% |
| 3681802 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.50 | 34.0 | 2.57e-01 | 76.9% | 55.4% |