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MN103401.1__QEA10859.1__X__00002

Bact-Vir

MN103401.1__QEA10859.1__X__00002

Identity

Accession:
MN103401 ↗
Kingdom:
phage

Quality

84.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-51
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13986.12 best DUF4224 43.6 3.30e-11 91.3% 86.7%
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pjsA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.67 50.0 3.95e-01 82.6% 86.3%
3zi1A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.60 46.0 3.44e-01 89.1% 81.4%
2xfvA00 3.10.260.30 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › 0.60 48.0 3.85e-01 100.0% 57.4%
8dy9I01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.60 48.0 3.21e-01 95.7% 92.2%
2i0zA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 48.0 3.08e-01 97.8% 41.5%
3to7A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 44.0 3.73e-01 100.0% 46.9%
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.59 48.0 3.71e-01 100.0% 38.8%
1wi9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 40.0 3.81e-01 73.9% 93.1%
4krdB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.59 40.0 2.75e-01 73.9% 37.4%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 42.0 3.65e-01 78.3% 52.0%
1biaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 3.87e-01 80.4% 90.6%
3qaoA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.58 47.0 3.52e-01 100.0% 34.3%
2p1aB01 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.58 41.0 2.96e-01 78.3% 91.1%
4r24B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.58 47.0 4.02e-01 100.0% 55.3%
2fpqA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.58 45.0 2.68e-01 95.7% 13.8%
1a9xA07 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.57 43.0 4.14e-01 82.6% 90.9%
3p5pA02 1.50.10.160 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.57 39.0 2.65e-01 73.9% 36.6%
1e1hB01 1.20.58.540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 45.0 3.68e-01 97.8% 52.4%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.57 45.0 3.50e-01 100.0% 38.1%
1sg6A02 1.20.1090.10 Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain 0.57 39.0 2.67e-01 76.1% 61.4%
2zj2A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 3.41e-01 78.3% 53.6%
1xtfA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.57 43.0 2.61e-01 95.7% 12.9%
2gqfA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 48.0 3.07e-01 100.0% 79.9%
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.57 46.0 3.61e-01 100.0% 44.2%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.56 45.0 4.07e-01 100.0% 66.7%
6jgwA01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.56 45.0 3.53e-01 100.0% 38.8%
2gaxA00 3.40.1490.10 Alpha Beta › 3-Layer(aba) Sandwich › Bit1 › Bit1 0.56 50.0 3.57e-01 100.0% 85.8%
7ewfB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 3.81e-01 93.5% 93.3%
2p6rA03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.56 40.0 2.63e-01 78.3% 19.7%
6oinA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 45.0 4.11e-01 100.0% 70.1%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 43.0 4.00e-01 93.5% 93.7%
1epwA01 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.55 47.0 2.76e-01 100.0% 53.0%
2p5kA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 3.72e-01 78.3% 61.9%
1gydB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 42.0 2.65e-01 91.3% 33.7%
1t3aA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.54 46.0 2.75e-01 100.0% 51.7%
5i41B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.54 42.0 3.93e-01 100.0% 70.1%
6p2uA02 3.30.30.30 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.54 39.0 3.85e-01 84.8% 75.0%
2v7fA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 41.0 3.05e-01 91.3% 65.5%
2j62A02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 43.0 2.66e-01 95.7% 81.3%
2vqmA00 3.40.800.20 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain 0.53 40.0 2.39e-01 84.8% 76.7%
3pvsA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.53 41.0 3.59e-01 89.1% 88.2%
5fbhA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 43.0 2.70e-01 97.8% 84.6%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.69e-01 95.7% 80.8%
1wruA02 3.55.50.10 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains 0.52 38.0 3.26e-01 84.8% 76.1%
3qphA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 3.46e-01 100.0% 78.4%
2e1mA05 1.10.405.10 Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › Guanine Nucleotide Dissociation Inhibitor, domain 1 0.52 36.0 3.14e-01 100.0% 41.8%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.55e-01 97.8% 67.9%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.47e-01 95.7% 65.2%
6hxiA01 3.30.470.110 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › 0.51 39.0 2.79e-01 100.0% 89.9%
3lapA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 44.0 3.84e-01 100.0% 64.7%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 38.0 3.39e-01 100.0% 55.1%
2l02A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 39.0 3.36e-01 100.0% 50.0%
3cz8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.50 42.0 3.97e-01 100.0% 87.7%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5055051 242.4.1.2 a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central 0.67 54.0 4.14e-01 89.1% 83.8%
3278372 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.66 55.0 5.02e-01 100.0% 69.2%
5082561 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.66 56.0 5.52e-01 100.0% 92.0%
3953197 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.64 54.0 4.34e-01 100.0% 47.4%
4956736 242.4.1.2 a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central 0.63 54.0 4.26e-01 95.7% 80.0%
4933147 242.4.1.2 a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central 0.63 50.0 3.91e-01 89.1% 84.8%
5047649 101.1.9.36 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.63 52.0 5.11e-01 100.0% 90.0%
3580147 109.4.1.1505 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_FBXO47 0.63 44.0 2.59e-01 73.9% 24.9%
4995013 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.62 52.0 4.41e-01 100.0% 67.9%
4932995 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.62 51.0 5.06e-01 100.0% 90.0%
5046808 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 48.0 3.35e-01 89.1% 24.8%
4933561 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.60 49.0 4.72e-01 100.0% 81.8%
5064906 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.60 49.0 4.76e-01 100.0% 87.3%
139679 101.1.9.21 alpha arrays › HTH › HTH › Putative DNA-binding domain › Swi6_N 0.60 48.0 3.85e-01 100.0% 57.4%
3476654 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 44.0 2.63e-01 84.8% 30.7%
3970754 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.59 49.0 4.22e-01 100.0% 60.0%
4096952 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.59 49.0 3.83e-01 100.0% 40.9%
4031764 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.58 48.0 3.59e-01 100.0% 34.8%
3243321 188.1.1.1 alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep 0.58 41.0 2.59e-01 78.3% 36.8%
4994568 101.1.9.36 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.58 47.0 4.53e-01 100.0% 87.3%
4668740 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.58 46.0 3.75e-01 100.0% 45.7%
3387245 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.57 47.0 3.52e-01 100.0% 35.6%
3282088 101.1.9.84 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR, MerR_1 0.57 47.0 3.87e-01 100.0% 54.7%
3975516 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.57 47.0 3.73e-01 100.0% 42.9%
3289439 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.57 45.0 4.41e-01 100.0% 83.6%
3201844 101.1.2.45 alpha arrays › HTH › HTH › winged helix domain › SAC3_GANP 0.57 49.0 3.84e-01 100.0% 44.8%
4223228 101.1.9.21 alpha arrays › HTH › HTH › Putative DNA-binding domain › Swi6_N 0.57 47.0 3.90e-01 97.8% 78.9%
5030545 101.1.2.21 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.57 44.0 3.19e-01 100.0% 28.6%
3941467 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.57 46.0 4.00e-01 100.0% 60.0%
None 0.56 47.0 3.22e-01 97.8% 54.3%
3972191 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.56 47.0 3.46e-01 100.0% 33.6%
3921946 101.1.2.507 alpha arrays › HTH › HTH › winged helix domain › HTH_TANC1 0.56 39.0 2.77e-01 73.9% 67.7%
4488952 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.56 45.0 3.61e-01 100.0% 43.6%
4935756 242.2.1.0 a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like 0.56 39.0 3.73e-01 73.9% 98.2%
4197446 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.56 46.0 3.45e-01 100.0% 35.6%
3969986 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.56 46.0 2.98e-01 97.8% 32.3%
3828246 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.56 45.0 3.48e-01 93.5% 50.9%
4284807 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.55 45.0 3.38e-01 100.0% 34.3%
3560879 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 40.0 3.00e-01 78.3% 56.8%
3284986 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.55 45.0 3.46e-01 100.0% 39.2%
5055121 101.1.2.19 alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.55 45.0 3.03e-01 95.7% 42.1%
4999062 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.55 42.0 3.38e-01 100.0% 41.1%
3616963 109.4.1.1505 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_FBXO47 0.55 38.0 2.43e-01 73.9% 30.6%
3954355 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.55 44.0 3.53e-01 100.0% 43.6%
3707832 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 45.0 3.62e-01 100.0% 48.0%
3959369 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 40.0 3.03e-01 82.6% 83.5%
3943344 183.1.1.0 alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain 0.53 42.0 3.07e-01 100.0% 28.6%
360918 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.53 42.0 3.32e-01 100.0% 42.7%
4096065 3239.1.1.1 alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.53 40.0 2.56e-01 97.8% 85.0%
3690576 5001.1.1.32 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Solute_trans_a 0.53 43.0 2.64e-01 95.7% 79.4%
1721528 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 39.0 3.05e-01 87.0% 56.2%
4625844 101.1.2.20 alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.52 43.0 3.74e-01 100.0% 60.0%
4653130 101.1.2.20 alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.51 43.0 3.40e-01 100.0% 45.3%
3975657 101.1.2.20 alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.51 41.0 3.53e-01 100.0% 54.7%
4195219 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.51 40.0 3.25e-01 93.5% 78.0%
4679974 101.1.2.20 alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.51 42.0 3.60e-01 97.8% 57.3%
3372020 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.51 39.0 3.45e-01 93.5% 56.2%
4106869 101.1.2.20 alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.50 43.0 3.73e-01 100.0% 62.9%