←Back to structures

MN103401.1__QEA10915.1__X__00058

Bact-Vir

MN103401.1__QEA10915.1__X__00058

Identity

Accession:
MN103401 ↗
Kingdom:
phage

Quality

90.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bordetella_phage_vB_BbrS_PHB09

TaxID: 2601609

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-101
PDB
Domain cluster: rep: IMGVR_UViG_3300009518_000141-3300009518-Ga0116128_10021947__D2-93
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2cy5A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 56.0 5.16e-01 100.0% 82.9%
3voqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 46.0 4.44e-01 100.0% 69.8%
1zkiA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 35.0 3.24e-01 100.0% 47.2%
2dslA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 36.0 3.41e-01 100.0% 53.0%
1c8uA02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 35.0 3.38e-01 100.0% 53.9%
2hboA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 36.0 3.24e-01 100.0% 47.4%
1b7eA01 3.90.350.10 Alpha Beta › Alpha-Beta Complex › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 0.56 42.0 3.17e-01 97.0% 32.1%
2xstA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 50.0 4.43e-01 100.0% 69.1%
3he1A00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.56 49.0 4.28e-01 94.0% 75.5%
1z54A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 36.0 3.30e-01 100.0% 50.0%
5byuA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 35.0 3.24e-01 100.0% 50.0%
2egjA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 36.0 3.33e-01 100.0% 52.4%
2l5pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 50.0 4.15e-01 100.0% 64.6%
2oafB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 36.0 3.20e-01 100.0% 46.5%
2kt4B01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 49.0 4.35e-01 100.0% 76.1%
1dfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 49.0 4.08e-01 100.0% 65.3%
2oiwA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 36.0 3.29e-01 100.0% 51.9%
1pcfA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.54 32.0 3.79e-01 97.0% 89.4%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 48.0 4.16e-01 100.0% 71.6%
1epaA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 48.0 4.10e-01 100.0% 67.5%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.53 28.0 2.96e-01 91.0% 53.9%
3qkgA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 47.0 4.02e-01 100.0% 68.9%
4oddA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 47.0 4.11e-01 100.0% 72.5%
1u17A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 46.0 3.79e-01 100.0% 65.9%
4xmeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 46.0 3.79e-01 100.0% 65.8%
2lkoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 41.0 3.79e-01 100.0% 64.5%
4kc7A02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.51 44.0 4.51e-01 100.0% 99.0%
5h9kA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 45.0 3.93e-01 100.0% 68.2%
4wfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 45.0 3.95e-01 100.0% 69.9%
2mcfA00 3.40.50.11630 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 40.0 3.59e-01 98.0% 58.8%
2ichA01 2.40.370.10 Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain 0.51 45.0 3.75e-01 100.0% 92.2%
3l4rA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 44.0 3.92e-01 100.0% 70.9%
2yh6D00 3.30.530.50 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › 0.50 32.0 3.16e-01 91.0% 58.2%
2ra6C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 44.0 3.98e-01 100.0% 74.8%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4030120 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.75 61.0 3.78e-01 100.0% 17.0%
4458952 220.1.1.4 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 0.72 59.0 5.37e-01 100.0% 66.7%
3222614 220.1.1.158 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 0.72 60.0 5.75e-01 100.0% 78.3%
4178260 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.71 57.0 6.15e-01 99.0% 100.0%
5007104 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.71 57.0 5.62e-01 100.0% 81.0%
3730739 220.1.1.4 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 0.68 60.0 5.45e-01 100.0% 72.2%
3636379 220.1.1.203 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_23 0.67 57.0 4.93e-01 100.0% 59.4%
4938400 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.67 59.0 5.60e-01 100.0% 82.6%
3917310 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.65 34.0 4.11e-01 72.0% 76.9%
3906073 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 48.0 4.77e-01 100.0% 74.3%
5013239 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.65 56.0 5.49e-01 100.0% 87.3%
4964696 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.64 53.0 5.12e-01 99.0% 79.1%
3555634 220.1.1.43 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SIN1_PH 0.63 51.0 4.48e-01 100.0% 60.0%
3935534 375.1.9.2 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase › SANTA 0.62 41.0 3.74e-01 92.0% 50.4%
3686517 220.1.1.112 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_10 0.61 55.0 4.66e-01 100.0% 60.6%
4522783 101.1.2.715 ↗ alpha arrays › HTH › HTH › winged helix domain › CheF-arch 0.60 48.0 3.49e-01 100.0% 30.7%
3504767 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.60 34.0 3.92e-01 88.0% 78.6%
3781666 222.1.1.10 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 0.59 35.0 3.21e-01 100.0% 45.4%
5016315 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.59 52.0 4.89e-01 99.0% 79.2%
3882182 220.1.1.132 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.58 47.0 4.37e-01 100.0% 67.7%
3406485 1181.1.1.0 ↗ 0.57 30.0 3.48e-01 100.0% 71.4%
3548672 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.57 51.0 4.45e-01 100.0% 69.7%
6100 222.1.1.16 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › Acyl-ACP_TE_C 0.57 34.0 3.32e-01 100.0% 54.1%
4947698 2004.1.1.86 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › FeoB_N 0.57 33.0 2.86e-01 88.0% 34.5%
3217866 222.1.1.10 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 0.57 35.0 3.40e-01 100.0% 56.4%
3851797 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.56 51.0 4.31e-01 100.0% 65.5%
5031616 4.26.1.0 ↗ beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 0.56 32.0 4.00e-01 78.0% 100.0%
3317450 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 39.0 3.85e-01 76.0% 67.3%
3897308 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.55 50.0 4.25e-01 100.0% 68.3%
2156956 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.55 33.0 2.94e-01 99.0% 40.7%
3800763 304.114.1.0 ↗ a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.55 41.0 2.98e-01 78.0% 74.2%
3997614 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 40.0 3.76e-01 76.0% 65.8%
3986557 2484.1.1.199 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut 0.54 40.0 3.83e-01 78.0% 86.1%
4445317 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.54 48.0 4.18e-01 100.0% 68.4%
3560129 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.53 46.0 4.28e-01 96.0% 83.2%
4960002 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 35.0 3.62e-01 97.0% 73.3%
4139943 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.53 47.0 4.10e-01 100.0% 69.7%
3854952 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.52 47.0 4.11e-01 100.0% 68.0%
3667340 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.52 41.0 3.84e-01 84.0% 92.8%
3745663 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.52 47.0 3.89e-01 100.0% 62.4%
4028113 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.51 40.0 3.66e-01 85.0% 79.3%
4449665 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.51 45.0 3.90e-01 100.0% 66.9%
4062537 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.51 45.0 3.91e-01 100.0% 69.0%
3453242 192.18.1.0 ↗ alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.51 38.0 2.44e-01 80.0% 87.6%
2420857 10.1.1.55 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PL28 0.51 37.0 2.82e-01 78.0% 56.5%
3854099 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.50 44.0 3.87e-01 100.0% 71.0%