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MN103533.1__QEA10810.1__X__00042
Bact-VirMN103533.1__QEA10810.1__X__00042
Identity
- Accession:
- MN103533 ↗
- Kingdom:
- phage
Quality
67.1
mean pLDDT
Taxonomy
TaxID: 2601610
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 59-125
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3r8qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.73 | 48.0 | 4.40e-01 | 100.0% | 51.1% |
| 5j11C02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.72 | 46.0 | 4.11e-01 | 100.0% | 44.9% |
| 2edyA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.72 | 46.0 | 4.03e-01 | 100.0% | 42.7% |
| 3qt2B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.72 | 46.0 | 4.02e-01 | 100.0% | 43.9% |
| 2qjvA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.70 | 41.0 | 3.20e-01 | 100.0% | 26.0% |
| 4dohE02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.70 | 45.0 | 3.87e-01 | 100.0% | 41.5% |
| 2v5yA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 44.0 | 4.00e-01 | 100.0% | 46.3% |
| 3lb6C01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 44.0 | 4.03e-01 | 100.0% | 48.9% |
| 4gs7C02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 45.0 | 4.00e-01 | 100.0% | 45.9% |
| 2dn7A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 45.0 | 3.89e-01 | 100.0% | 43.0% |
| 5l10B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.68 | 51.0 | 3.88e-01 | 83.6% | 97.1% |
| 3lqmA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 43.0 | 3.83e-01 | 100.0% | 43.1% |
| 2nmlA00 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.68 | 61.0 | 5.32e-01 | 100.0% | 72.0% |
| 1cbfA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.67 | 43.0 | 3.56e-01 | 100.0% | 35.5% |
| 5utkA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 44.0 | 4.14e-01 | 100.0% | 54.2% |
| 1uc6A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 44.0 | 3.79e-01 | 100.0% | 41.3% |
| 1b04A02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.66 | 48.0 | 4.20e-01 | 100.0% | 51.5% |
| 1dgsA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.65 | 47.0 | 4.19e-01 | 100.0% | 53.7% |
| 2e3vA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 46.0 | 3.99e-01 | 100.0% | 48.5% |
| 6rpxA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 42.0 | 3.94e-01 | 100.0% | 52.9% |
| 1x5fA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 43.0 | 3.61e-01 | 100.0% | 39.2% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.64 | 45.0 | 4.55e-01 | 100.0% | 75.8% |
| 1tdqA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 44.0 | 4.06e-01 | 100.0% | 54.4% |
| 5e53A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 43.0 | 3.95e-01 | 100.0% | 52.7% |
| 3hrzC01 | 2.20.210.20 | Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › | 0.63 | 42.0 | 4.70e-01 | 98.5% | 95.9% |
| 2npnA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.63 | 45.0 | 3.89e-01 | 100.0% | 47.7% |
| 7kfuC02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.62 | 47.0 | 3.33e-01 | 85.1% | 63.1% |
| 5e55B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 42.0 | 3.86e-01 | 100.0% | 52.7% |
| 2q0oA01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.61 | 48.0 | 3.69e-01 | 89.6% | 96.4% |
| 1mhxA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.60 | 46.0 | 4.65e-01 | 80.6% | 89.2% |
| 2pw9C03 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.60 | 53.0 | 4.17e-01 | 97.0% | 50.7% |
| 5kycB02 | 2.20.210.10 | Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › ubp-family deubiquitinating enzyme superfamily | 0.58 | 42.0 | 4.67e-01 | 100.0% | 98.1% |
| 3rb5A02 | 2.60.40.2030 | Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain | 0.58 | 38.0 | 3.18e-01 | 100.0% | 36.8% |
| 2v5yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 39.0 | 3.52e-01 | 100.0% | 48.0% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.57 | 47.0 | 4.31e-01 | 94.0% | 92.4% |
| 2xskA00 | 2.60.40.2420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 44.0 | 3.95e-01 | 100.0% | 58.9% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.57 | 47.0 | 3.63e-01 | 97.0% | 90.4% |
| 1vwxS01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 46.0 | 4.52e-01 | 100.0% | 87.3% |
| 2w7qB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.55 | 47.0 | 3.51e-01 | 100.0% | 76.1% |
| 2hn1A01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.54 | 44.0 | 3.60e-01 | 97.0% | 84.5% |
| 4a4aA02 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.54 | 43.0 | 3.49e-01 | 88.1% | 67.7% |
| 1ln0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.50 | 40.0 | 3.71e-01 | 100.0% | 67.4% |
| 1eu3A01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.50 | 42.0 | 3.56e-01 | 98.5% | 80.3% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3841255 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.73 | 46.0 | 4.10e-01 | 100.0% | 45.3% |
| 3235639 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.69 | 45.0 | 3.57e-01 | 100.0% | 32.6% |
| 3561595 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 44.0 | 4.16e-01 | 100.0% | 51.8% |
| 3843387 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 42.0 | 3.87e-01 | 100.0% | 45.6% |
| 3845950 | 11.1.1.129 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind | 0.68 | 44.0 | 3.70e-01 | 100.0% | 38.3% |
| 3552660 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.68 | 44.0 | 3.77e-01 | 100.0% | 39.1% |
| 3498929 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.68 | 44.0 | 3.76e-01 | 100.0% | 40.0% |
| 3778393 | 11.1.1.327 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CRLF2-like_D2 | 0.68 | 45.0 | 3.58e-01 | 100.0% | 33.3% |
| 3564154 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 44.0 | 3.81e-01 | 100.0% | 40.9% |
| 3859590 | 386.1.1.248 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_ZNF592 | 0.68 | 47.0 | 5.25e-01 | 100.0% | 98.0% |
| 3535929 | 386.1.1.248 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_ZNF592 | 0.67 | 46.0 | 3.40e-01 | 98.5% | 27.4% |
| 3917675 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.67 | 43.0 | 3.89e-01 | 100.0% | 46.3% |
| 3871678 | 11.1.1.129 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind | 0.67 | 43.0 | 3.75e-01 | 100.0% | 41.9% |
| 3508717 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 42.0 | 4.19e-01 | 100.0% | 61.4% |
| 3929359 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.67 | 58.0 | 4.98e-01 | 100.0% | 78.0% |
| 3797681 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 44.0 | 3.83e-01 | 100.0% | 43.8% |
| 3231572 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 47.0 | 4.15e-01 | 100.0% | 51.0% |
| 3501846 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.66 | 44.0 | 3.85e-01 | 100.0% | 44.8% |
| 4472409 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.64 | 48.0 | 3.68e-01 | 83.6% | 95.3% |
| None | — | 0.63 | 56.0 | 5.01e-01 | 100.0% | 77.9% | |
| 5045774 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.63 | 55.0 | 4.31e-01 | 97.0% | 51.4% |
| 4930766 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.62 | 54.0 | 4.30e-01 | 97.0% | 53.3% |
| 5035793 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 45.0 | 4.49e-01 | 100.0% | 74.3% |
| 4935672 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.62 | 55.0 | 4.28e-01 | 97.0% | 50.0% |
| 5047755 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.62 | 53.0 | 4.22e-01 | 97.0% | 51.4% |
| 3242873 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 41.0 | 3.57e-01 | 100.0% | 42.7% |
| 3863279 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.61 | 42.0 | 3.54e-01 | 100.0% | 41.7% |
| 4105434 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.61 | 53.0 | 4.05e-01 | 97.0% | 46.8% |
| 4954188 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.61 | 52.0 | 4.08e-01 | 97.0% | 47.0% |
| 5003530 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.61 | 52.0 | 4.12e-01 | 97.0% | 51.4% |
| 5020151 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.60 | 52.0 | 4.19e-01 | 97.0% | 53.3% |
| 5027350 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.60 | 43.0 | 3.44e-01 | 100.0% | 37.0% |
| 3514371 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.60 | 51.0 | 3.70e-01 | 100.0% | 50.2% |
| 3242062 | 3680.1.1.1 ↗ | a+b complex topology › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › SARA_C | 0.59 | 39.0 | 3.10e-01 | 70.1% | 53.3% |
| 3994984 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.57 | 46.0 | 4.69e-01 | 100.0% | 93.8% |
| 4397568 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.57 | 41.0 | 3.80e-01 | 100.0% | 58.9% |
| 5014684 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.57 | 41.0 | 4.26e-01 | 100.0% | 91.4% |
| 4969863 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.56 | 43.0 | 4.24e-01 | 100.0% | 77.3% |
| 5080205 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.56 | 39.0 | 4.18e-01 | 100.0% | 100.0% |
| 4152762 | 2492.1.1.20 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › APOBEC3 | 0.56 | 49.0 | 3.58e-01 | 100.0% | 44.7% |
| 3312666 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 39.0 | 3.93e-01 | 100.0% | 72.9% |
| 5081134 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.56 | 38.0 | 4.01e-01 | 100.0% | 83.3% |
| 4967222 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.55 | 44.0 | 4.58e-01 | 98.5% | 96.7% |
| 3504586 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.55 | 38.0 | 3.03e-01 | 100.0% | 32.3% |
| 4015408 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.55 | 45.0 | 2.84e-01 | 100.0% | 16.5% |
| 3467170 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.55 | 41.0 | 4.25e-01 | 100.0% | 88.9% |
| 5070290 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.54 | 39.0 | 3.23e-01 | 77.6% | 82.4% |
| 4448678 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.54 | 47.0 | 4.54e-01 | 98.5% | 98.7% |
| 4175825 | 387.1.1.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related | 0.52 | 38.0 | 3.87e-01 | 100.0% | 80.0% |
| 3822370 | 304.163.1.2 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › ACT_13 | 0.52 | 45.0 | 4.11e-01 | 98.5% | 98.9% |
| 5040259 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.51 | 40.0 | 3.41e-01 | 100.0% | 50.4% |
| 4927303 | 525.1.1.1 ↗ | a+b two layers › Urease, gamma-subunit › Urease, gamma-subunit › Urease, gamma-subunit › Urease_gamma | 0.51 | 44.0 | 3.71e-01 | 100.0% | 90.0% |
| 3627950 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 40.0 | 3.06e-01 | 92.5% | 42.2% |