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MN103542.1__QEM41718.1__X__00083

Bact-Vir

MN103542.1__QEM41718.1__X__00083

Identity

Accession:
MN103542 ↗
Kingdom:
phage

Quality

80.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Saphexavirus› Enterococcus_phage_vB_EfaS_EF1c55

TaxID: 2601631

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 59-125
PDB
Domain cluster: rep: OX463805.1__CAI9187667.1__X__00148__D114-167
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3h6qA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.59 48.0 3.65e-01 91.0% 96.4%
3ol0B00 6.20.90.30 Special › Other non-globular › SH3 type barrels. › 0.56 33.0 3.77e-01 70.1% 92.7%
5yrzA01 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 43.0 3.84e-01 89.6% 90.5%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 34.0 3.88e-01 89.6% 91.5%
2qxfA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 45.0 3.33e-01 97.0% 55.2%
1b25A02 1.10.569.10 Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 0.52 36.0 2.83e-01 77.6% 59.6%
1eigA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.50 33.0 3.26e-01 92.5% 60.3%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3447770 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.59 32.0 4.01e-01 94.0% 100.0%
3731630 4.8.1.36 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7141 0.58 37.0 3.92e-01 97.0% 73.3%
5049906 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.58 34.0 3.60e-01 92.5% 65.0%
3581336 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 42.0 3.67e-01 82.1% 84.5%
3993275 109.2.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Prenyltrans 0.53 41.0 2.71e-01 88.1% 33.6%
4958385 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.53 31.0 3.72e-01 91.0% 97.5%
3404622 358.2.1.1 ↗ a+b complex topology › SRCR-like › A heparin-binding domain › A heparin-binding domain › APP_N 0.52 41.0 3.66e-01 88.1% 98.0%
3912274 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.51 34.0 3.44e-01 91.0% 67.1%
3373330 4.1.1.337 ↗ beta barrels › SH3 › SH3 › SH3 › CSD_RNase_II 0.51 34.0 3.34e-01 70.1% 76.0%
3894564 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.51 35.0 3.30e-01 91.0% 57.8%