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MN153503.1__QEM43209.1__CHOTACABRAS_155__00155

Bact-Vir

MN153503.1__QEM43209.1__CHOTACABRAS_155__00155

Identity

Accession:
MN153503 ↗
Kingdom:
phage

Quality

86.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Bequatrovirus› Bacillus_phage_Chotacabras

TaxID: 2601669

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-72
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.63 44.0 4.42e-01 96.4% 71.9%
5gtqA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.63 54.0 3.40e-01 100.0% 28.7%
1sr4A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.62 52.0 3.80e-01 100.0% 82.6%
4gp3A03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.62 51.0 4.08e-01 98.2% 95.9%
1y5oA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 51.0 4.17e-01 100.0% 77.4%
2ci9B00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.61 54.0 4.43e-01 100.0% 69.0%
2hc5A01 3.30.160.170 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like 0.60 48.0 4.15e-01 96.4% 61.2%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 50.0 4.13e-01 98.2% 62.9%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.59 49.0 4.13e-01 100.0% 78.8%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 47.0 4.10e-01 100.0% 76.0%
2mhdA00 2.40.128.370 Mainly Beta › Beta Barrel › Lipocalin › 0.57 43.0 3.61e-01 87.3% 65.5%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 46.0 3.70e-01 100.0% 59.7%
4wjsA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 47.0 2.91e-01 100.0% 37.1%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 43.0 4.35e-01 100.0% 87.5%
3a54A01 2.40.50.340 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 42.0 3.69e-01 87.3% 76.7%
1cruA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 45.0 2.73e-01 100.0% 84.8%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 43.0 3.82e-01 100.0% 60.0%
3zm6A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.54 41.0 2.77e-01 92.7% 21.1%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 42.0 3.91e-01 100.0% 67.1%
1plqA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.54 37.0 2.47e-01 74.5% 47.3%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 44.0 4.51e-01 100.0% 98.1%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 46.0 4.50e-01 100.0% 96.6%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3797569 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.71 54.0 5.48e-01 83.6% 96.4%
3947081 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.68 58.0 5.59e-01 100.0% 98.4%
4507316 220.1.1.20 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.66 56.0 4.52e-01 100.0% 71.3%
3164102 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.63 44.0 4.79e-01 87.3% 91.1%
4348606 4.1.1.440 ↗ beta barrels › SH3 › SH3 › SH3 › PF27165 0.62 50.0 4.86e-01 100.0% 80.0%
5045955 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.62 49.0 3.40e-01 92.7% 69.3%
3230359 207.1.1.66 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › DUF3557 0.62 51.0 3.32e-01 100.0% 21.7%
3347851 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.61 46.0 4.28e-01 100.0% 64.3%
4972400 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 43.0 4.58e-01 76.4% 97.8%
3965976 809.1.1.1 ↗ a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › SmpA_OmlA 0.61 48.0 4.15e-01 90.9% 56.4%
4386701 310.2.1.35 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › PF28954 0.61 49.0 3.67e-01 92.7% 74.5%
3890922 220.1.1.132 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.60 51.0 4.24e-01 100.0% 68.6%
3627817 220.1.1.47 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.60 51.0 3.29e-01 100.0% 28.5%
3496724 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.60 49.0 4.57e-01 94.5% 78.6%
4024411 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 43.0 4.35e-01 100.0% 80.0%
4933213 375.1.1.31 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 0.59 45.0 4.28e-01 90.9% 82.9%
3356481 386.1.1.117 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7028 0.59 45.0 3.98e-01 94.5% 56.6%
3176989 601.19.1.40 ↗ alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › PF28954 0.58 48.0 3.48e-01 92.7% 67.5%
4989457 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 43.0 4.48e-01 85.5% 98.0%
4618205 604.1.1.150 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF28954 0.58 47.0 3.71e-01 92.7% 82.5%
3996686 220.1.1.47 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.58 48.0 3.64e-01 100.0% 57.3%
3869545 220.1.1.125 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_PLEKHM2 0.56 43.0 3.38e-01 92.7% 42.9%
3499127 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 47.0 3.84e-01 100.0% 64.3%
3709800 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.56 47.0 4.04e-01 100.0% 81.1%
5048969 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.55 42.0 3.91e-01 89.1% 90.7%
3501699 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 43.0 3.83e-01 100.0% 60.0%
4026577 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.55 40.0 4.08e-01 81.8% 98.2%
3315491 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 42.0 3.20e-01 89.1% 33.6%
3626694 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 44.0 3.81e-01 100.0% 56.7%
3274551 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.54 44.0 4.01e-01 92.7% 89.3%
5023931 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.54 39.0 3.67e-01 89.1% 62.9%
4947834 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 45.0 3.75e-01 100.0% 69.5%
4390303 5.1.3.238 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29568 0.53 44.0 2.56e-01 100.0% 52.6%
2388493 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.53 40.0 3.81e-01 100.0% 68.8%
3263031 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 40.0 3.87e-01 100.0% 73.8%
5014250 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 40.0 3.63e-01 87.3% 86.3%
3789233 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.52 46.0 4.41e-01 100.0% 89.2%
3998167 247.1.1.0 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.52 36.0 2.53e-01 87.3% 18.0%
279006 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.51 45.0 4.23e-01 100.0% 84.1%
3389940 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.51 43.0 3.74e-01 100.0% 82.2%
4265586 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.50 39.0 3.09e-01 89.1% 47.2%