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MN158216.1__QGH77520.1__X__00042
Bact-VirMN158216.1__QGH77520.1__X__00042
Identity
- Accession:
- MN158216 ↗
- Kingdom:
- phage
Quality
87.2
mean pLDDT
Taxonomy
TaxID: 2656630
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-113
Domain cluster:
rep: MH051918.1__AWD92281.1__X__00081__D16-102
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bkyX00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.74 | 39.0 | 4.30e-01 | 98.1% | 61.6% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 34.0 | 3.64e-01 | 97.1% | 57.6% |
| 1tz0B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 36.0 | 3.72e-01 | 100.0% | 61.9% |
| 3m2oA01 | 3.30.720.120 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.59 | 28.0 | 3.63e-01 | 93.2% | 83.0% |
| 6c98A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 31.0 | 3.26e-01 | 100.0% | 53.8% |
| 2ymsC00 | 2.40.10.480 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.58 | 31.0 | 3.51e-01 | 85.4% | 66.7% |
| 4zovB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 35.0 | 2.39e-01 | 85.4% | 15.8% |
| 8cukB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 37.0 | 2.64e-01 | 87.4% | 20.5% |
| 2znhA03 | 6.20.40.10 | Special › Other non-globular › Porin MspA ribbon fold › | 0.56 | 25.0 | 3.53e-01 | 70.9% | 91.5% |
| 1ygyA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 29.0 | 3.23e-01 | 95.1% | 63.2% |
| 2ymsA00 | 2.40.128.630 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 31.0 | 2.94e-01 | 84.5% | 42.7% |
| 2joxA00 | 2.60.40.4240 | Mainly Beta › Sandwich › Immunoglobulin-like › Transcription activator, Churchill | 0.55 | 39.0 | 3.95e-01 | 96.1% | 73.6% |
| 4j87A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 37.0 | 2.69e-01 | 84.5% | 23.1% |
| 3ct9A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 38.0 | 3.81e-01 | 100.0% | 71.0% |
| 3oh8A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 48.0 | 4.34e-01 | 100.0% | 79.3% |
| 3njcA00 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.53 | 33.0 | 2.93e-01 | 95.1% | 41.8% |
| 4tpvA00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.53 | 39.0 | 3.24e-01 | 100.0% | 43.4% |
| 4h5iB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 35.0 | 2.43e-01 | 88.3% | 19.7% |
| 3facA00 | 2.170.150.70 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › | 0.53 | 39.0 | 3.83e-01 | 100.0% | 72.5% |
| 1inpA02 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.52 | 46.0 | 3.79e-01 | 98.1% | 86.1% |
| 1mg2A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 32.0 | 2.24e-01 | 84.5% | 16.8% |
| 3lppA02 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.51 | 43.0 | 3.25e-01 | 89.3% | 64.1% |
| 4r6uA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 35.0 | 3.55e-01 | 100.0% | 71.8% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3744188 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.75 | 37.0 | 3.40e-01 | 72.8% | 37.0% |
| 4948152 | 256.1.1.0 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like | 0.72 | 40.0 | 4.75e-01 | 97.1% | 80.0% |
| 4019090 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.68 | 37.0 | 3.24e-01 | 75.7% | 35.3% |
| 3667432 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.68 | 40.0 | 4.18e-01 | 100.0% | 63.2% |
| 3970700 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.68 | 37.0 | 3.50e-01 | 75.7% | 43.0% |
| 3587593 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.66 | 35.0 | 3.93e-01 | 100.0% | 65.0% |
| 3959925 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.65 | 46.0 | 4.69e-01 | 99.0% | 76.0% |
| 3696444 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.64 | 33.0 | 2.89e-01 | 74.8% | 31.9% |
| 3642252 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.63 | 46.0 | 4.52e-01 | 100.0% | 71.8% |
| 3603456 | 304.8.1.82 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF27325 | 0.62 | 36.0 | 3.84e-01 | 100.0% | 65.6% |
| 4033579 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.61 | 39.0 | 3.62e-01 | 100.0% | 52.8% |
| 5046815 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.61 | 55.0 | 3.76e-01 | 100.0% | 46.1% |
| 3490212 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.59 | 52.0 | 3.90e-01 | 100.0% | 55.3% |
| 4385221 | 3943.1.1.0 ↗ | beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains | 0.59 | 37.0 | 3.58e-01 | 81.6% | 55.7% |
| 4773067 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.58 | 31.0 | 3.51e-01 | 85.4% | 66.7% |
| 3575872 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.55 | 46.0 | 3.43e-01 | 91.3% | 68.8% |
| 4952429 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.55 | 34.0 | 3.50e-01 | 98.1% | 65.0% |
| 3724501 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.53 | 39.0 | 3.38e-01 | 75.7% | 56.1% |
| 3580019 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.53 | 33.0 | 3.83e-01 | 96.1% | 96.9% |
| 3230984 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.53 | 43.0 | 3.95e-01 | 90.3% | 92.9% |
| 3632159 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.52 | 38.0 | 3.27e-01 | 75.7% | 57.5% |
| 3969749 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.51 | 37.0 | 3.52e-01 | 100.0% | 63.2% |