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MN158217.1__QGH77609.1__X__00043

Bact-Vir

MN158217.1__QGH77609.1__X__00043

Identity

Accession:
MN158217 ↗
Kingdom:
phage

Quality

95.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Drexlerviridae› Hanrivervirus› Escherichia_phage_BEC3

TaxID: 2656624

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-68
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ysiA01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.65 34.0 4.10e-01 94.0% 93.9%
3q7yA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.63 54.0 4.51e-01 100.0% 96.8%
5cq2A02 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.62 33.0 3.91e-01 97.0% 76.7%
1nunA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.62 53.0 4.29e-01 100.0% 89.9%
4govA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.62 53.0 4.36e-01 100.0% 91.6%
3nbxX04 2.40.128.430 Mainly Beta › Beta Barrel › Lipocalin › 0.62 53.0 4.62e-01 100.0% 67.3%
4whiA00 2.40.128.600 Mainly Beta › Beta Barrel › Lipocalin › 0.61 50.0 4.34e-01 100.0% 58.8%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 40.0 4.49e-01 100.0% 100.0%
1y9lA00 2.40.128.230 Mainly Beta › Beta Barrel › Lipocalin › Pilot protein MxiM 0.60 50.0 4.41e-01 100.0% 97.3%
2mdiA00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.58 34.0 3.65e-01 85.1% 66.1%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 44.0 4.45e-01 100.0% 81.8%
3u9sE04 3.30.700.40 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.53 42.0 3.48e-01 89.6% 85.6%
4a2lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 40.0 2.64e-01 85.1% 20.7%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 42.0 3.54e-01 100.0% 92.5%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4533388 219.1.1.122 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PF28648 0.65 41.0 2.83e-01 100.0% 18.7%
3932020 59.1.1.2 ↗ beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › RNA_pol_Rpc4 0.64 48.0 4.03e-01 80.6% 80.0%
4238585 375.1.4.1 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C 0.62 46.0 4.94e-01 95.5% 100.0%
4123857 391.1.2.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.59 31.0 3.82e-01 85.1% 85.0%
3615422 59.1.1.2 ↗ beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › RNA_pol_Rpc4 0.59 45.0 3.63e-01 83.6% 68.1%
4854352 59.1.1.2 ↗ beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › RNA_pol_Rpc4 0.58 45.0 3.72e-01 85.1% 76.8%
3749834 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.58 41.0 4.41e-01 95.5% 92.7%
3191150 59.1.1.5 ↗ beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Dcc1 0.58 45.0 3.96e-01 85.1% 87.0%
3874056 64.1.1.1 ↗ beta meanders › WW domain-like › WW domain › WW domain › WW 0.57 39.0 4.13e-01 95.5% 89.1%
3818549 59.1.1.2 ↗ beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › RNA_pol_Rpc4 0.57 43.0 3.80e-01 85.1% 73.3%
3631376 6.1.1.0 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.56 48.0 3.92e-01 100.0% 98.5%
3404988 3794.1.1.0 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.56 43.0 3.55e-01 88.1% 94.1%
3303919 59.1.1.16 ↗ beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › PF30948 0.56 44.0 3.93e-01 86.6% 84.2%
3838919 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.54 46.0 3.74e-01 100.0% 93.6%
3568187 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.54 30.0 3.48e-01 71.6% 94.3%
3606829 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.54 47.0 3.36e-01 100.0% 32.7%
3787747 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.53 43.0 3.32e-01 100.0% 52.9%
3254214 59.1.1.5 ↗ beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Dcc1 0.52 40.0 3.80e-01 85.1% 85.9%
3936855 292.2.1.1 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.52 41.0 2.93e-01 89.6% 57.8%
3275700 6043.1.1.4 ↗ a+b two layers › yfeY-like › yfeY-like › yfeY-like › PHAF1 0.52 45.0 3.09e-01 100.0% 54.5%
3384591 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 37.0 3.67e-01 79.1% 85.7%
4946465 375.1.4.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain 0.51 35.0 3.84e-01 80.6% 100.0%