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MN158218.1__QGH77698.1__X__00048
Bact-VirMN158218.1__QGH77698.1__X__00048
Identity
- Accession:
- MN158218 ↗
- Kingdom:
- phage
Quality
75.5
mean pLDDT
Taxonomy
TaxID: 2656623
Cluster
View cluster (247 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 43-125
Domain cluster:
rep: JF974295.1__AGH57514.1__PSYG_00053__00053__D42-120
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pp6A02 | 2.40.10.210 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) | 0.75 | 47.0 | 5.38e-01 | 83.1% | 84.1% |
| 1wxrA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.72 | 43.0 | 3.00e-01 | 81.9% | 19.5% |
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.70 | 50.0 | 5.12e-01 | 80.7% | 77.2% |
| 3k6yA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.68 | 43.0 | 4.17e-01 | 83.1% | 57.6% |
| 3f3bA00 | 2.40.10.370 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 | 0.65 | 52.0 | 4.60e-01 | 86.7% | 60.9% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.64 | 50.0 | 4.39e-01 | 85.5% | 58.1% |
| 3fgeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 50.0 | 3.91e-01 | 84.3% | 64.0% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.63 | 57.0 | 5.26e-01 | 100.0% | 91.4% |
| 2r6vA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 49.0 | 3.88e-01 | 84.3% | 64.6% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.60 | 47.0 | 4.19e-01 | 85.5% | 60.7% |
| 4bfeA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 39.0 | 4.02e-01 | 88.0% | 69.1% |
| 4xhyA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 47.0 | 3.78e-01 | 85.5% | 63.4% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.58 | 46.0 | 4.34e-01 | 92.8% | 68.8% |
| 1g3pA02 | 3.90.450.1 | Alpha Beta › Alpha-Beta Complex › Minor Coat Protein; domain 2 › Minor Coat Protein; Domain 2 | 0.58 | 42.0 | 3.93e-01 | 75.9% | 80.8% |
| 2iteA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 40.0 | 3.60e-01 | 83.1% | 49.6% |
| 3h2bB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 42.0 | 3.22e-01 | 77.1% | 83.7% |
| 3pftA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 45.0 | 3.65e-01 | 85.5% | 66.0% |
| 2w1jA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.56 | 45.0 | 3.40e-01 | 85.5% | 61.0% |
| 2wcrB00 | 3.10.129.140 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Helicobacter TNF-alpha-Inducing protein | 0.55 | 41.0 | 3.40e-01 | 78.3% | 71.9% |
| 4paaA05 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.55 | 40.0 | 4.17e-01 | 78.3% | 88.6% |
| 4l8jA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.55 | 50.0 | 4.81e-01 | 100.0% | 93.7% |
| 3zugB02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.55 | 48.0 | 4.05e-01 | 100.0% | 93.7% |
| 3rgfA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 41.0 | 3.92e-01 | 81.9% | 69.8% |
| 2x9aA00 | 2.30.27.10 | Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain | 0.54 | 35.0 | 3.93e-01 | 72.3% | 88.5% |
| 1pj5A05 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.54 | 42.0 | 4.34e-01 | 85.5% | 88.5% |
| 3c8cB02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 38.0 | 3.54e-01 | 75.9% | 86.7% |
| 3o5yB00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.54 | 41.0 | 3.45e-01 | 83.1% | 78.2% |
| 1cz3B00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.53 | 42.0 | 3.36e-01 | 85.5% | 98.2% |
| 4ofyD03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.69e-01 | 84.3% | 66.7% |
| 4bfiB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.78e-01 | 86.7% | 71.1% |
| 6h8oA00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.52 | 32.0 | 3.14e-01 | 75.9% | 53.7% |
| 3c8cB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 39.0 | 3.49e-01 | 81.9% | 66.9% |
| 4bhqA00 | 3.30.70.2830 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 41.0 | 3.81e-01 | 88.0% | 78.9% |
| 1jssA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 41.0 | 3.14e-01 | 88.0% | 71.9% |
| 4y85C01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 36.0 | 3.19e-01 | 84.3% | 50.0% |
| 6xrbA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.50 | 38.0 | 3.23e-01 | 80.7% | 89.2% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4669352 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.82 | 65.0 | 5.84e-01 | 86.7% | 62.7% |
| 3963092 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.78 | 52.0 | 4.92e-01 | 84.3% | 58.9% |
| 4260208 | 1.1.13.62 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27197 | 0.76 | 59.0 | 5.43e-01 | 81.9% | 67.6% |
| 3943285 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 55.0 | 4.99e-01 | 84.3% | 75.2% |
| 3588729 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 52.0 | 4.92e-01 | 80.7% | 71.6% |
| 3945543 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.66 | 54.0 | 5.45e-01 | 88.0% | 87.1% |
| 3968097 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.66 | 51.0 | 4.58e-01 | 84.3% | 60.9% |
| 169594 | 1.1.13.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF3599 | 0.65 | 52.0 | 4.60e-01 | 86.7% | 60.9% |
| 160389 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.65 | 50.0 | 4.35e-01 | 85.5% | 55.3% |
| 4883825 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.64 | 52.0 | 5.00e-01 | 86.7% | 81.5% |
| 5035997 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 48.0 | 5.16e-01 | 100.0% | 94.3% |
| 169881 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.63 | 50.0 | 3.75e-01 | 84.3% | 55.6% |
| 4047545 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.63 | 48.0 | 3.93e-01 | 81.9% | 56.8% |
| 2137681 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.61 | 48.0 | 4.36e-01 | 85.5% | 63.3% |
| 5077063 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.61 | 48.0 | 5.06e-01 | 100.0% | 94.7% |
| 4379249 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.60 | 47.0 | 4.09e-01 | 84.3% | 60.0% |
| 3905151 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.60 | 43.0 | 3.72e-01 | 84.3% | 48.5% |
| 4178356 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.59 | 43.0 | 4.27e-01 | 78.3% | 80.0% |
| 2774000 | 881.4.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB › MucB_RseB_C | 0.58 | 40.0 | 3.75e-01 | 83.1% | 57.3% |
| 3672433 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.58 | 44.0 | 3.07e-01 | 92.8% | 23.4% |
| 4554638 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.58 | 43.0 | 3.98e-01 | 84.3% | 61.9% |
| 3777314 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.57 | 42.0 | 4.02e-01 | 84.3% | 67.4% |
| 3288169 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.57 | 41.0 | 4.22e-01 | 75.9% | 88.7% |
| 3210962 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 52.0 | 4.95e-01 | 100.0% | 93.7% |
| 3264437 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 41.0 | 3.92e-01 | 84.3% | 64.8% |
| 4270552 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.55 | 40.0 | 3.82e-01 | 84.3% | 64.0% |
| 3821077 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 47.0 | 3.10e-01 | 96.4% | 42.1% |
| 3299946 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.55 | 50.0 | 4.45e-01 | 100.0% | 88.7% |
| 4093842 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.55 | 42.0 | 3.01e-01 | 81.9% | 38.8% |
| 3883286 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.54 | 40.0 | 3.53e-01 | 84.3% | 52.0% |
| 3237729 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 48.0 | 4.49e-01 | 100.0% | 83.8% |
| 4110501 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.54 | 42.0 | 3.02e-01 | 85.5% | 46.5% |
| 3599082 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.54 | 42.0 | 3.54e-01 | 84.3% | 71.0% |
| 4008034 | 223.1.1.113 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF30408 | 0.53 | 39.0 | 3.17e-01 | 79.5% | 52.9% |
| 5045968 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.52 | 45.0 | 2.83e-01 | 97.6% | 39.1% |
| 3725920 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.52 | 36.0 | 3.51e-01 | 73.5% | 71.6% |
| 5069785 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.52 | 39.0 | 3.42e-01 | 80.7% | 74.4% |
| 3883232 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 39.0 | 3.79e-01 | 83.1% | 83.2% |
| 1813813 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 35.0 | 3.21e-01 | 71.1% | 79.3% |
| 3983134 | 223.1.1.113 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF30408 | 0.51 | 37.0 | 3.57e-01 | 78.3% | 83.0% |
| 3897262 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.51 | 39.0 | 3.68e-01 | 83.1% | 79.0% |
| 3268578 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 45.0 | 4.10e-01 | 100.0% | 80.0% |