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MN176227.1__QFR56377.1__049ML001_75__00075
Bact-VirMN176227.1__QFR56377.1__049ML001_75__00075
Identity
- Accession:
- MN176227 ↗
- Kingdom:
- phage
Quality
89.3
mean pLDDT
Taxonomy
TaxID: 2601660
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-40
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wcrB00 | 3.10.129.140 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Helicobacter TNF-alpha-Inducing protein | 0.92 | 74.0 | 4.81e-01 | 86.8% | 22.6% |
| 3tl4X01 | 1.10.8.1290 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1, domain 1 | 0.85 | 59.0 | 4.12e-01 | 73.7% | 24.6% |
| 4a8eA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.83 | 70.0 | 5.33e-01 | 97.4% | 41.4% |
| 1bvsF03 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.81 | 60.0 | 5.80e-01 | 84.2% | 71.1% |
| 2ddmB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.76 | 67.0 | 3.97e-01 | 100.0% | 85.2% |
| 3iylU02 | 1.10.287.1520 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.75 | 63.0 | 5.73e-01 | 100.0% | 71.7% |
| 4issA02 | 1.20.58.1700 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 56.0 | 4.48e-01 | 84.2% | 76.3% |
| 5e9hB01 | 1.10.10.850 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.73 | 58.0 | 4.22e-01 | 92.1% | 36.3% |
| 2hcfA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.72 | 57.0 | 4.86e-01 | 92.1% | 52.3% |
| 1t9kA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.72 | 60.0 | 4.17e-01 | 100.0% | 66.4% |
| 3kd3A02 | 1.10.150.210 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Phosphoserine phosphatase; domain 2 | 0.72 | 53.0 | 4.54e-01 | 78.9% | 51.7% |
| 3qxzA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.70 | 57.0 | 4.94e-01 | 92.1% | 65.0% |
| 1irqA00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.69 | 57.0 | 5.37e-01 | 100.0% | 77.1% |
| 3gueB01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.69 | 57.0 | 3.34e-01 | 100.0% | 74.2% |
| 2lqxA00 | 6.10.250.1700 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.67 | 52.0 | 5.15e-01 | 94.7% | 78.0% |
| 1cmbA00 | 1.10.140.10 | Mainly Alpha › Orthogonal Bundle › MET Apo-Repressor, subunit A › MET Apo-Repressor, subunit A | 0.66 | 53.0 | 3.91e-01 | 92.1% | 33.7% |
| 2yfqB01 | 1.10.8.1210 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 49.0 | 4.45e-01 | 86.8% | 86.5% |
| 4ohcC00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 45.0 | 2.91e-01 | 100.0% | 61.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4932940 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.92 | 77.0 | 5.45e-01 | 94.7% | 32.7% |
| 3343260 | 192.15.1.123 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Na_H_Exchanger | 0.78 | 66.0 | 5.86e-01 | 94.7% | 69.1% |
| 4951511 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.77 | 58.0 | 5.30e-01 | 84.2% | 62.0% |
| 3850399 | 3788.1.1.13 ↗ | alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › DMAP_binding | 0.75 | 67.0 | 5.03e-01 | 100.0% | 54.4% |
| 3318685 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.73 | 58.0 | 4.34e-01 | 94.7% | 36.2% |
| 3755193 | 4146.1.1.7 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like › DMAP_binding | 0.73 | 63.0 | 4.99e-01 | 100.0% | 61.3% |
| 3494026 | 109.4.1.70 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID | 0.71 | 60.0 | 4.08e-01 | 94.7% | 27.4% |
| 4193561 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.68 | 57.0 | 5.40e-01 | 92.1% | 80.0% |