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MN176229.1__QFG05833.1__055SW001_83__00083

Bact-Vir

MN176229.1__QFG05833.1__055SW001_83__00083

Identity

Accession:
MN176229 ↗
Kingdom:
phage

Quality

84.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bacillus_phage_055SW001

TaxID: 2601662

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-91
PDB
Domain cluster: rep: MW960030.1__QWY82978.1__X__00024__D5-103
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02195.27 best ParB_N 37.2 3.70e-09 97.7% 66.0%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vk1A01 3.90.1530.10 Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain 0.84 71.0 6.65e-01 100.0% 75.5%
1xw3A01 3.90.1530.10 Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain 0.80 71.0 6.80e-01 100.0% 84.4%
1vz0A01 3.90.1530.30 Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › 0.78 51.0 5.79e-01 74.4% 90.5%
2hwjA01 3.90.1530.10 Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain 0.76 63.0 5.52e-01 100.0% 61.1%
7txnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 33.0 3.33e-01 76.7% 61.1%
1r29A00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.52 30.0 2.68e-01 100.0% 39.3%
5m38C00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.51 39.0 3.60e-01 83.7% 71.1%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3971842 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.89 85.0 7.15e-01 100.0% 65.4%
4928673 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.87 72.0 7.51e-01 95.3% 92.5%
2543651 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.87 73.0 7.23e-01 100.0% 85.4%
3945776 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.86 74.0 7.10e-01 100.0% 81.1%
4927766 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.86 73.0 7.41e-01 100.0% 90.6%
5032171 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.86 68.0 6.87e-01 94.2% 83.5%
4931651 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.86 68.0 6.58e-01 100.0% 75.8%
4974679 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.85 67.0 6.29e-01 100.0% 69.2%
3943767 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.85 68.0 6.85e-01 96.5% 84.7%
2710114 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.84 73.0 7.13e-01 98.8% 84.9%
4946472 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.83 71.0 7.39e-01 100.0% 97.5%
2061501 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.83 70.0 6.67e-01 100.0% 77.8%
5082449 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.83 71.0 6.97e-01 100.0% 85.6%
4929132 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.83 74.0 7.18e-01 100.0% 86.3%
4970064 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.83 71.0 7.42e-01 100.0% 97.5%
2387795 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.82 69.0 6.96e-01 100.0% 88.5%
5073795 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.81 76.0 6.57e-01 100.0% 88.0%
3772471 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.81 72.0 7.15e-01 100.0% 91.1%
4958363 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.81 68.0 6.91e-01 96.5% 90.6%
3988408 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.80 64.0 6.78e-01 94.2% 96.0%
3278076 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.80 67.0 6.62e-01 100.0% 85.6%
3942579 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.80 65.0 6.97e-01 97.7% 98.7%
4344404 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.80 71.0 6.66e-01 100.0% 80.0%
5073612 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.79 73.0 6.79e-01 100.0% 80.0%
5049279 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.79 75.0 7.04e-01 100.0% 88.0%
2841795 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.79 68.0 6.69e-01 100.0% 86.7%
4947338 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.79 74.0 5.55e-01 100.0% 47.9%
3587492 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.79 70.0 6.63e-01 100.0% 82.0%
3178377 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.78 73.0 6.32e-01 100.0% 84.0%
5052345 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.78 63.0 6.23e-01 96.5% 82.2%
4862436 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.77 69.0 6.72e-01 96.5% 87.4%
3992892 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.76 65.0 6.71e-01 98.8% 97.5%
1842312 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.76 62.0 6.24e-01 100.0% 86.0%
7603 876.1.1.2 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc_2 0.76 63.0 6.36e-01 100.0% 89.5%
3602844 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.75 70.0 6.20e-01 100.0% 75.0%
3946729 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.75 68.0 6.62e-01 100.0% 92.6%
3948471 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.75 68.0 6.17e-01 100.0% 77.4%
5018770 876.1.1.4 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 0.73 64.0 5.59e-01 94.2% 73.6%
5083282 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.73 66.0 6.26e-01 100.0% 84.0%
3723395 876.1.1.6 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › PF29418 0.73 66.0 5.89e-01 100.0% 81.5%
4964225 876.1.1.4 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 0.71 65.0 5.35e-01 100.0% 86.0%
5030163 876.1.1.4 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 0.71 62.0 5.70e-01 95.3% 85.7%
3686504 876.1.1.6 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › PF29418 0.70 61.0 5.71e-01 100.0% 78.1%
5075504 876.1.1.4 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 0.69 59.0 5.88e-01 94.2% 91.1%
5081788 876.1.1.4 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 0.69 62.0 5.75e-01 100.0% 85.5%
None — 0.61 38.0 3.15e-01 75.6% 34.4%
4292998 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.57 38.0 3.28e-01 75.6% 43.0%
3662655 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.53 35.0 3.13e-01 75.6% 44.6%
2512535 3187.1.1.1 ↗ alpha bundles › Microtubule-Binding Domain of Flagellar Dynein › Microtubule-Binding Domain of Flagellar Dynein › Microtubule-Binding Domain of Flagellar Dynein › MT 0.51 37.0 3.05e-01 76.7% 83.4%
3400506 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.51 34.0 2.93e-01 75.6% 41.4%
3226411 243.1.1.82 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26529 0.51 35.0 3.04e-01 74.4% 81.3%
D2 high residues 95-158
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.83 67.0 7.14e-01 87.5% 100.0%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 56.0 6.00e-01 76.6% 88.9%
2jrtA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 63.0 5.65e-01 92.2% 65.1%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 54.0 5.75e-01 89.1% 90.7%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 51.0 5.49e-01 73.4% 94.1%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 54.0 5.44e-01 81.2% 89.4%
6s6hA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.72 65.0 5.40e-01 100.0% 69.7%
3d7iB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.72 58.0 5.00e-01 87.5% 66.3%
4qicC01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.71 59.0 4.77e-01 92.2% 85.6%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 46.0 4.36e-01 70.3% 56.6%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 42.0 4.75e-01 71.9% 93.2%
5dllA05 1.25.50.10 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain 0.66 52.0 3.38e-01 90.6% 25.8%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 43.0 3.31e-01 70.3% 37.7%
2xheA04 1.25.40.60 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.64 51.0 4.27e-01 90.6% 49.2%
1epuA03 1.25.40.60 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.64 51.0 4.20e-01 90.6% 46.8%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 43.0 3.43e-01 70.3% 43.9%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.64 53.0 4.17e-01 93.8% 87.9%
6vudA01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.63 47.0 3.95e-01 79.7% 85.3%
7l1iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 43.0 3.29e-01 71.9% 39.2%
2fxaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 42.0 3.25e-01 73.4% 39.1%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 41.0 3.33e-01 70.3% 50.0%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.60 48.0 3.17e-01 85.9% 91.8%
2ggfA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.60 48.0 3.88e-01 92.2% 51.1%
3oopA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 41.0 3.29e-01 71.9% 42.5%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.60 44.0 3.75e-01 79.7% 85.3%
3h5qA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.60 48.0 4.76e-01 93.8% 92.9%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.59 52.0 4.20e-01 100.0% 99.2%
3lvyE01 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.59 51.0 3.82e-01 98.4% 69.7%
4rm7A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.59 52.0 4.01e-01 96.9% 56.8%
2pgeA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.59 41.0 3.36e-01 73.4% 47.2%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.58 48.0 4.13e-01 92.2% 80.6%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 4.24e-01 89.1% 72.1%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 3.26e-01 79.7% 63.6%
2ld7B00 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.57 42.0 4.09e-01 84.4% 69.3%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 46.0 4.21e-01 89.1% 74.1%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 3.17e-01 76.6% 40.7%
3nrvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 3.61e-01 87.5% 45.7%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 3.19e-01 78.1% 41.1%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 3.27e-01 78.1% 44.8%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 4.26e-01 95.3% 90.0%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.54 37.0 4.12e-01 82.8% 100.0%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.54 34.0 3.82e-01 75.0% 100.0%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 4.34e-01 100.0% 90.5%
2rldA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.53 40.0 3.40e-01 84.4% 62.3%
2a61B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.25e-01 84.4% 40.9%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 40.0 3.20e-01 85.9% 45.2%
2fbiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.30e-01 92.2% 42.6%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 41.0 3.55e-01 98.4% 55.8%
2iaiA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.51 35.0 3.53e-01 75.0% 78.5%
2pbiA02 1.10.1240.60 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.51 35.0 3.11e-01 71.9% 46.5%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 39.0 3.28e-01 92.2% 46.0%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3944370 101.1.1.318 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF30335 0.90 73.0 7.06e-01 87.5% 78.6%
4958294 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.84 70.0 7.21e-01 92.2% 95.0%
4595970 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.84 69.0 7.18e-01 92.2% 95.0%
5051712 101.1.4.90 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_23 0.83 57.0 6.14e-01 78.1% 83.6%
4958364 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.81 70.0 6.10e-01 95.3% 100.0%
3279913 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.81 58.0 4.03e-01 75.0% 38.9%
3965313 101.1.1.63 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.80 54.0 5.74e-01 70.3% 96.4%
4102958 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.80 62.0 6.21e-01 89.1% 81.5%
4293871 101.1.1.62 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.79 56.0 5.96e-01 73.4% 89.1%
4174590 101.1.2.61 ↗ alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4 0.79 58.0 5.78e-01 76.6% 76.9%
4961899 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.79 53.0 5.35e-01 70.3% 76.9%
3953011 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.78 55.0 5.84e-01 73.4% 87.3%
165311 101.1.6.3 ↗ alpha arrays › HTH › HTH › TrpR › DUF1153 0.78 63.0 5.45e-01 92.2% 58.9%
1291824 101.1.1.95 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PhyR_sigma-like 0.77 50.0 5.74e-01 81.2% 89.6%
4437729 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.76 65.0 5.55e-01 93.8% 73.0%
3963064 101.1.1.251 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_ParB 0.76 68.0 5.85e-01 100.0% 79.0%
3873677 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.75 54.0 5.24e-01 75.0% 87.1%
3401087 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.75 52.0 5.70e-01 75.0% 92.0%
4023331 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.75 54.0 5.81e-01 76.6% 90.9%
3970884 101.1.1.13 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.75 53.0 4.67e-01 75.0% 57.9%
4106860 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.75 63.0 5.54e-01 93.8% 75.8%
4007596 101.1.2.139 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.75 50.0 5.51e-01 87.5% 88.0%
4533441 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.74 62.0 5.46e-01 93.8% 76.8%
3983411 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.74 52.0 4.97e-01 75.0% 89.3%
4347676 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.74 61.0 5.48e-01 92.2% 78.9%
3590753 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.74 50.0 5.41e-01 70.3% 96.0%
3404418 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.73 52.0 5.08e-01 75.0% 88.6%
4197050 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.73 62.0 5.25e-01 93.8% 69.5%
4520850 101.1.1.251 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_ParB 0.73 58.0 5.71e-01 92.2% 81.4%
3963308 101.1.1.63 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.72 54.0 4.83e-01 81.2% 72.2%
3671163 101.1.1.267 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.71 56.0 4.66e-01 84.4% 82.7%
4280807 101.1.1.13 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.71 50.0 5.37e-01 75.0% 100.0%
5004314 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.71 48.0 4.63e-01 71.9% 69.3%
3586837 101.1.1.17 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.71 49.0 5.34e-01 73.4% 94.0%
4489802 101.1.1.251 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_ParB 0.70 59.0 5.90e-01 96.9% 92.3%
4604979 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.70 61.0 5.18e-01 96.9% 70.2%
5080109 101.1.2.139 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.70 48.0 4.56e-01 71.9% 70.7%
3984938 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.69 53.0 4.95e-01 84.4% 100.0%
3908686 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.69 53.0 4.53e-01 84.4% 85.7%
3656429 101.1.1.267 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.68 56.0 3.87e-01 89.1% 42.4%
4339805 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.68 57.0 3.99e-01 93.8% 63.4%
5003692 101.1.6.12 ↗ alpha arrays › HTH › HTH › TrpR › HTH_23 0.67 45.0 4.55e-01 70.3% 72.3%
1685282 109.4.1.241 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF3458_C 0.66 52.0 3.38e-01 90.6% 25.8%
3916395 101.1.1.129 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_4 0.66 55.0 4.60e-01 90.6% 74.3%
4093687 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.65 52.0 4.60e-01 85.9% 75.6%
5072420 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 43.0 4.73e-01 70.3% 90.0%
None — 0.63 53.0 4.72e-01 90.6% 75.6%
3281471 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.61 52.0 4.84e-01 93.8% 87.5%
3966282 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 42.0 3.26e-01 71.9% 43.9%
3282318 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.61 44.0 3.36e-01 76.6% 41.4%
4968313 101.1.6.12 ↗ alpha arrays › HTH › HTH › TrpR › HTH_23 0.60 50.0 4.71e-01 93.8% 78.8%
3269934 509.1.1.0 ↗ alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain 0.60 48.0 4.26e-01 89.1% 70.5%
4966195 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.59 49.0 4.83e-01 92.2% 92.9%
5018167 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.59 49.0 4.82e-01 93.8% 87.1%
3602631 101.1.2.150 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.57 43.0 4.04e-01 81.2% 66.3%
3913655 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.57 49.0 4.61e-01 96.9% 88.7%
3256356 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.55 48.0 4.82e-01 96.9% 98.4%
5057214 101.1.2.15 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR 0.54 41.0 3.75e-01 84.4% 64.4%
4990163 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.51 41.0 3.75e-01 100.0% 65.3%