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MN180249.1__QHJ75410.1__X__00012

Bact-Vir

MN180249.1__QHJ75410.1__X__00012

Identity

Accession:
MN180249 ↗
Kingdom:
phage

Quality

86.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-66
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06763.18 best Minor_tail_Z 28.1 2.40e-06 98.3% 23.7%
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1v9mA01 1.10.132.50 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › ATP synthase (C/AC39) subunit, domain 3 0.65 48.0 3.88e-01 80.0% 99.1%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4973801 7523.1.1.22 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › ABC2_membrane_3 0.91 68.0 5.03e-01 80.0% 34.8%
4142281 105.1.1.55 alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain › Latarcin 0.84 60.0 5.09e-01 75.0% 47.9%
4991887 212.1.1.22 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Topo-VIb_trans 0.77 67.0 5.48e-01 100.0% 54.8%
3708157 316.1.1.30 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PAP_NTPase 0.77 59.0 4.05e-01 81.7% 25.1%
3597193 316.1.1.0 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.76 58.0 4.04e-01 81.7% 26.5%
3838953 2004.1.1.234 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrB_D3-like 0.62 48.0 3.07e-01 90.0% 59.7%