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MN180249.1__QHJ75435.1__X__00037
Bact-VirMN180249.1__QHJ75435.1__X__00037
Identity
- Accession:
- MN180249 ↗
- Kingdom:
- phage
Quality
82.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-141
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01098.25 best | FTSW_RODA_SPOVE | 93.7 | 1.70e-26 | 100.0% | 36.2% |
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s2xA00 | 1.20.190.30 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › CAG pathogenicity island protein, CagZ | 0.71 | 57.0 | 5.17e-01 | 83.8% | 91.7% |
| 6j7xA01 | 1.25.40.120 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Protein prenylyltransferase | 0.67 | 50.0 | 3.99e-01 | 100.0% | 38.9% |
| 5nnpE01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.66 | 43.0 | 2.96e-01 | 95.6% | 18.7% |
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.64 | 49.0 | 4.65e-01 | 80.1% | 100.0% |
| 3ns4A00 | 1.10.357.110 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Vacuolar protein sorting-associated protein 53, C-terminus | 0.64 | 45.0 | 3.90e-01 | 72.1% | 60.5% |
| 4xaxB02 | 1.20.58.1290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain | 0.63 | 38.0 | 4.40e-01 | 84.6% | 81.8% |
| 1w9cA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.62 | 55.0 | 4.19e-01 | 98.5% | 52.0% |
| 2vgxB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 37.0 | 3.65e-01 | 84.6% | 55.2% |
| 3k8pC01 | 1.20.58.1440 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 44.0 | 4.95e-01 | 78.7% | 100.0% |
| 1oxjA02 | 1.25.40.170 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Smaug, PHAT domain | 0.59 | 41.0 | 4.53e-01 | 83.1% | 90.8% |
| 3pjaJ01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.59 | 45.0 | 4.62e-01 | 80.9% | 87.0% |
| 3cf6E03 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.59 | 42.0 | 4.28e-01 | 80.1% | 76.3% |
| 2n3eA01 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.58 | 37.0 | 4.01e-01 | 79.4% | 75.7% |
| 2pfdA03 | 1.20.120.680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle | 0.58 | 46.0 | 4.04e-01 | 84.6% | 66.5% |
| 3r9mA00 | 1.25.40.280 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains | 0.57 | 48.0 | 3.59e-01 | 93.4% | 39.4% |
| 2gs4A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.57 | 39.0 | 3.80e-01 | 70.6% | 92.4% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 41.0 | 4.47e-01 | 80.9% | 92.1% |
| 4gltA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 41.0 | 4.45e-01 | 89.0% | 91.2% |
| 3rauA00 | 1.25.40.280 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains | 0.55 | 47.0 | 3.56e-01 | 94.9% | 53.9% |
| 2c41C01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.54 | 38.0 | 3.70e-01 | 72.1% | 98.7% |
| 5cwkA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 48.0 | 4.47e-01 | 97.1% | 87.5% |
| 4y6cA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 47.0 | 4.05e-01 | 95.6% | 62.7% |
| 3kezA01 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 45.0 | 3.79e-01 | 94.1% | 74.5% |
| 2a2fX01 | 1.10.357.30 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Exocyst complex subunit Sec15 C-terminal domain, N-terminal subdomain | 0.52 | 45.0 | 4.25e-01 | 94.1% | 92.2% |
| 3pf0A00 | 1.20.1420.20 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › M75 peptidase, HXXE motif | 0.52 | 45.0 | 3.48e-01 | 95.6% | 63.8% |
| 3myvA01 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 44.0 | 3.74e-01 | 95.6% | 74.7% |
| 4i1eA03 | 1.25.10.30 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › IP3 receptor type 1 binding core, RIH domain | 0.52 | 40.0 | 4.06e-01 | 84.6% | 98.6% |
| 5u9nB00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.50 | 33.0 | 3.53e-01 | 80.1% | 75.0% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3163673 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.92 | 86.0 | 6.05e-01 | 100.0% | 36.4% |
| 3971967 | 7011.1.1.0 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain | 0.92 | 86.0 | 6.11e-01 | 100.0% | 37.7% |
| 2596950 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.90 | 83.0 | 6.00e-01 | 100.0% | 39.0% |
| 4588122 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.90 | 78.0 | 5.48e-01 | 89.7% | 34.1% |
| 3948609 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.90 | 84.0 | 5.89e-01 | 100.0% | 35.6% |
| 3588169 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.89 | 86.0 | 5.96e-01 | 100.0% | 41.8% |
| 4188007 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.89 | 84.0 | 6.02e-01 | 100.0% | 39.1% |
| 4392131 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.89 | 85.0 | 5.98e-01 | 100.0% | 37.0% |
| 4032919 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.88 | 84.0 | 5.88e-01 | 100.0% | 41.6% |
| 4503773 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.88 | 84.0 | 5.91e-01 | 100.0% | 42.2% |
| 4081917 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.87 | 81.0 | 5.84e-01 | 100.0% | 38.9% |
| 3588280 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.87 | 83.0 | 5.78e-01 | 100.0% | 38.9% |
| 3950731 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.87 | 83.0 | 5.75e-01 | 100.0% | 34.9% |
| 4278554 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.87 | 83.0 | 5.80e-01 | 100.0% | 38.7% |
| 4034265 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.87 | 82.0 | 5.68e-01 | 100.0% | 36.0% |
| 3165097 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.86 | 83.0 | 5.74e-01 | 100.0% | 35.0% |
| 3387207 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.86 | 82.0 | 5.88e-01 | 100.0% | 40.0% |
| 4650319 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.86 | 82.0 | 5.77e-01 | 100.0% | 39.7% |
| 3953403 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.85 | 81.0 | 5.65e-01 | 100.0% | 38.2% |
| 4136546 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.85 | 80.0 | 5.62e-01 | 100.0% | 38.1% |
| 3959627 | 7011.1.1.0 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain | 0.84 | 80.0 | 5.73e-01 | 100.0% | 39.1% |
| 4594296 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.83 | 76.0 | 5.36e-01 | 100.0% | 34.9% |
| 4607838 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.83 | 75.0 | 5.40e-01 | 100.0% | 36.6% |
| 4402712 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.83 | 78.0 | 5.56e-01 | 100.0% | 38.0% |
| 3387637 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.82 | 77.0 | 5.52e-01 | 100.0% | 40.8% |
| 3357058 | 109.3.1.40 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PGG | 0.69 | 56.0 | 5.49e-01 | 84.6% | 82.1% |
| 3741700 | 109.40.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › Ctf4_C | 0.68 | 51.0 | 5.50e-01 | 97.8% | 92.2% |
| 3583943 | 109.4.1.70 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID | 0.66 | 46.0 | 4.09e-01 | 79.4% | 49.0% |
| 3250486 | 109.4.1.449 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2,TPR_8 | 0.62 | 42.0 | 4.13e-01 | 92.6% | 63.3% |
| 3480326 | 109.40.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › Ctf4_C | 0.62 | 48.0 | 5.02e-01 | 96.3% | 90.4% |
| 3252200 | 603.1.1.6 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 | 0.61 | 47.0 | 4.52e-01 | 83.1% | 94.4% |
| 3901124 | 174.1.1.12 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › BCLP | 0.60 | 42.0 | 4.11e-01 | 71.3% | 68.7% |
| 3881223 | 3281.1.1.5 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M,Oxidored_q5_N | 0.60 | 53.0 | 3.68e-01 | 97.1% | 68.0% |
| 4237747 | 3281.1.1.5 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M,Oxidored_q5_N | 0.60 | 52.0 | 3.68e-01 | 97.1% | 68.0% |
| 3696321 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 53.0 | 3.81e-01 | 99.3% | 67.5% |
| 5001522 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.58 | 40.0 | 4.55e-01 | 70.6% | 95.1% |
| 3726383 | 109.4.1.1450 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29050 | 0.58 | 49.0 | 3.42e-01 | 93.4% | 27.3% |
| 3465019 | 601.1.1.54 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DUF4220 | 0.58 | 52.0 | 4.84e-01 | 100.0% | 85.1% |
| 3920492 | 109.4.1.1665 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30377 | 0.57 | 51.0 | 3.87e-01 | 99.3% | 58.5% |
| 4661834 | 109.4.1.179 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nro1 | 0.57 | 48.0 | 4.26e-01 | 94.1% | 85.7% |
| 3788119 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.57 | 51.0 | 3.79e-01 | 100.0% | 78.0% |
| 4352047 | 3281.1.1.1 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M | 0.57 | 49.0 | 3.54e-01 | 99.3% | 53.0% |
| 3730471 | 4982.1.1.4 ↗ | alpha arrays › KaiA/RbsU domain-like › KaiA/RbsU domain › KaiA/RbsU domain › SYS1 | 0.56 | 43.0 | 4.34e-01 | 80.1% | 85.9% |
| 3495971 | 109.4.1.155 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med23 | 0.56 | 47.0 | 2.98e-01 | 91.9% | 21.6% |
| 3428525 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 50.0 | 3.76e-01 | 99.3% | 72.5% |
| 4192537 | 109.4.1.464 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exportin-T | 0.55 | 49.0 | 4.15e-01 | 98.5% | 84.9% |
| 3997722 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.54 | 48.0 | 4.03e-01 | 98.5% | 86.7% |
| 3743854 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.54 | 48.0 | 3.31e-01 | 98.5% | 37.8% |
| 3717997 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 48.0 | 3.77e-01 | 99.3% | 72.8% |
| 3797233 | 603.5.1.0 ↗ | alpha bundles › STAT-like › FlgN-like › FlgN-like | 0.54 | 43.0 | 3.96e-01 | 86.8% | 93.3% |
| 3289317 | 191.1.1.41 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › EthR_C | 0.53 | 38.0 | 3.75e-01 | 75.0% | 70.0% |
| 4999710 | 601.28.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like | 0.53 | 34.0 | 3.68e-01 | 72.1% | 76.5% |
| 5041317 | 601.30.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N | 0.52 | 33.0 | 3.42e-01 | 76.5% | 67.2% |
| 3596158 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 44.0 | 4.35e-01 | 94.9% | 99.3% |
| 3595347 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 45.0 | 3.40e-01 | 96.3% | 40.3% |
| 3793729 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 44.0 | 3.51e-01 | 96.3% | 75.1% |
| 3682864 | 192.29.1.101 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Rx_N | 0.50 | 35.0 | 3.65e-01 | 72.1% | 83.8% |
D2
high
residues 144-308
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01098.25 best | FTSW_RODA_SPOVE | 183.2 | 1.00e-53 | 97.6% | 44.4% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.65 | 42.0 | 4.63e-01 | 74.5% | 79.1% |
| 1h6gA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.65 | 40.0 | 4.67e-01 | 70.3% | 85.7% |
| 4iggB02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.65 | 39.0 | 4.48e-01 | 74.5% | 81.0% |
| 3d2eA06 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.63 | 36.0 | 4.28e-01 | 77.0% | 82.3% |
| 4iggB06 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.60 | 48.0 | 4.35e-01 | 82.4% | 88.8% |
| 1f1mA00 | 1.20.120.240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 | 0.60 | 41.0 | 4.19e-01 | 78.2% | 71.0% |
| 1st6A01 | 1.20.120.810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vinculin, Vh2 four-helix bundle | 0.58 | 42.0 | 3.65e-01 | 75.2% | 57.6% |
| 1qkrB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.57 | 41.0 | 3.97e-01 | 73.9% | 66.1% |
| 1z72A00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.57 | 42.0 | 3.85e-01 | 75.2% | 76.4% |
| 1m57A00 | 1.20.210.10 | Mainly Alpha › Up-down Bundle › Cytochrome C Oxidase; Chain A › Cytochrome c oxidase-like, subunit I domain | 0.56 | 42.0 | 2.93e-01 | 84.8% | 23.9% |
| 5cy5B00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.55 | 41.0 | 4.36e-01 | 77.6% | 96.6% |
| 1dowA00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.54 | 41.0 | 3.77e-01 | 77.6% | 63.9% |
| 2bl2A00 | 1.20.120.610 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase | 0.52 | 35.0 | 3.66e-01 | 83.6% | 71.8% |
| 7cj3A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.52 | 46.0 | 3.96e-01 | 95.8% | 95.0% |
| 1i4dA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.52 | 38.0 | 3.70e-01 | 77.0% | 98.4% |
| 3vkgA02 | 1.20.140.100 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Dynein motor heavy chain, linker domain, N-terminal subdomain | 0.51 | 40.0 | 4.20e-01 | 83.6% | 100.0% |
| 2ddhA04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.50 | 35.0 | 3.86e-01 | 77.0% | 87.1% |
| 3ctwB00 | 1.10.8.930 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Protein of unknown function DUF1465 | 0.50 | 33.0 | 3.76e-01 | 73.3% | 90.0% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4650319 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.98 | 93.0 | 6.84e-01 | 97.0% | 43.5% |
| 3971967 | 7011.1.1.0 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain | 0.98 | 92.0 | 6.84e-01 | 95.8% | 45.1% |
| 3163673 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.98 | 93.0 | 6.87e-01 | 98.2% | 44.4% |
| 4402712 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.97 | 89.0 | 6.62e-01 | 98.8% | 43.9% |
| 3387637 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.96 | 86.0 | 6.37e-01 | 97.0% | 41.9% |
| 3588280 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.96 | 92.0 | 6.72e-01 | 99.4% | 42.9% |
| 3165097 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.96 | 93.0 | 6.74e-01 | 100.0% | 42.9% |
| 4287146 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.95 | 92.0 | 6.60e-01 | 100.0% | 40.5% |
| 4594296 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.95 | 91.0 | 6.62e-01 | 98.2% | 42.9% |
| 4034265 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.95 | 93.0 | 6.65e-01 | 100.0% | 40.9% |
| 3948609 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.95 | 93.0 | 6.79e-01 | 100.0% | 44.9% |
| 4032919 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.95 | 89.0 | 6.51e-01 | 99.4% | 41.8% |
| 3953403 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.95 | 88.0 | 6.39e-01 | 97.0% | 40.8% |
| 4607838 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.95 | 90.0 | 6.67e-01 | 98.8% | 45.1% |
| 4392131 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.95 | 91.0 | 6.73e-01 | 99.4% | 44.7% |
| 4278554 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.95 | 92.0 | 6.73e-01 | 100.0% | 44.0% |
| 3588169 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.95 | 89.0 | 6.47e-01 | 100.0% | 41.8% |
| 4588122 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.94 | 92.0 | 6.83e-01 | 100.0% | 46.8% |
| 3950731 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.94 | 92.0 | 6.61e-01 | 100.0% | 42.3% |
| 3387207 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.94 | 88.0 | 6.58e-01 | 100.0% | 45.1% |
| 3959627 | 7011.1.1.0 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain | 0.94 | 91.0 | 6.84e-01 | 100.0% | 48.4% |
| 4503773 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.93 | 85.0 | 6.26e-01 | 100.0% | 41.9% |
| 2596950 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.92 | 80.0 | 6.05e-01 | 100.0% | 43.8% |
| 4136546 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.91 | 88.0 | 6.34e-01 | 98.8% | 45.9% |
| 4188007 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.88 | 84.0 | 6.29e-01 | 97.6% | 55.6% |
| 4081917 | 7011.1.1.1 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › FTSW_RODA_SPOVE | 0.84 | 80.0 | 6.05e-01 | 98.2% | 71.4% |
| 4980730 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.75 | 38.0 | 5.34e-01 | 75.8% | 100.0% |
| 3471897 | 601.1.1.7 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Talin_IBS2B | 0.66 | 44.0 | 4.75e-01 | 75.2% | 78.6% |
| 3893417 | 601.1.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › CAS_C | 0.66 | 43.0 | 4.71e-01 | 75.2% | 79.3% |
| 3411201 | 601.1.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › CAS_C | 0.65 | 43.0 | 4.15e-01 | 75.8% | 60.0% |
| 4281434 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.65 | 38.0 | 4.26e-01 | 79.4% | 73.1% |
| 3701003 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.65 | 43.0 | 4.57e-01 | 81.2% | 75.9% |
| 4263659 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.64 | 38.0 | 4.17e-01 | 80.0% | 71.5% |
| 4952829 | 160.1.1.0 ↗ | alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0.63 | 40.0 | 4.08e-01 | 83.0% | 65.0% |
| 3472981 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.61 | 45.0 | 4.65e-01 | 75.8% | 85.6% |
| 3780807 | 174.1.1.52 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › PF27925 | 0.61 | 37.0 | 4.08e-01 | 82.4% | 73.8% |
| 3517467 | 6157.1.1.0 ↗ | alpha bundles › GKAP homology domain 1 › GKAP homology domain 1 › GKAP homology domain 1 | 0.61 | 40.0 | 4.80e-01 | 73.9% | 96.5% |
| 3448576 | 5001.1.1.10 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Ceramidase | 0.60 | 44.0 | 3.81e-01 | 75.2% | 94.1% |
| 3992921 | 3281.1.2.1 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit 8 (Nqo8)-related › NADHdh | 0.60 | 35.0 | 3.39e-01 | 73.9% | 51.4% |
| 3824606 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.58 | 40.0 | 3.96e-01 | 77.0% | 65.1% |
| 4997943 | 5039.1.1.2 ↗ | alpha bundles › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › DUF420 | 0.57 | 39.0 | 4.19e-01 | 70.9% | 79.2% |
| 54386 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.57 | 41.0 | 4.01e-01 | 73.9% | 67.6% |
| 3403588 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.54 | 40.0 | 3.42e-01 | 75.2% | 66.5% |
| 3881919 | 601.1.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › CAS_C | 0.54 | 42.0 | 3.91e-01 | 79.4% | 94.0% |
| 3762437 | 601.1.2.138 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › CAS_C | 0.52 | 41.0 | 3.90e-01 | 83.6% | 99.0% |