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MN180250.1__QHJ75441.1__X__00005

Bact-Vir

MN180250.1__QHJ75441.1__X__00005

Identity

Accession:
MN180250 ↗
Kingdom:
phage

Quality

83.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Wolbachia_phage_WO

TaxID: 112596

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-130
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ii2A04 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.70 43.0 5.31e-01 72.3% 100.0%
1dcqA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.69 47.0 4.45e-01 81.5% 58.0%
3au4A01 1.25.40.530 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain 0.69 42.0 3.70e-01 72.3% 40.8%
5mv9A01 1.25.40.530 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain 0.61 42.0 3.79e-01 76.2% 51.7%
3sl9B00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.61 42.0 3.90e-01 81.5% 55.2%
4ozvA00 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.60 52.0 3.82e-01 92.3% 79.3%
7zb5E01 3.40.50.10810 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain 0.58 45.0 3.42e-01 80.8% 47.6%
1oyjB02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.57 47.0 4.69e-01 87.7% 91.7%
4huqS00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.56 35.0 3.29e-01 70.8% 49.4%
1txuA02 1.20.1050.80 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › VPS9 domain 0.55 41.0 3.85e-01 77.7% 67.5%
3vpsB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 43.0 3.72e-01 83.1% 93.6%
3u8vA00 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.55 35.0 4.17e-01 97.7% 98.8%
3c8fA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 37.0 3.01e-01 87.7% 36.3%
4nwpD00 1.20.1200.10 Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like 0.54 39.0 3.79e-01 75.4% 73.2%
2eh3A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 37.0 3.81e-01 70.0% 79.5%
4fymF00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 43.0 3.69e-01 88.5% 54.1%
2r6tB01 1.20.1200.10 Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like 0.53 39.0 3.61e-01 76.9% 75.3%
1yy7A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 38.0 4.16e-01 76.2% 95.2%
1htjF00 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.51 36.0 3.30e-01 73.8% 96.2%
1dlcA01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.50 38.0 3.21e-01 80.8% 68.6%
3kyiA00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.50 36.0 3.70e-01 100.0% 75.8%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3894769 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.69 47.0 3.60e-01 82.3% 32.4%
3990706 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.68 46.0 3.43e-01 83.8% 27.6%
3894985 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.66 45.0 4.86e-01 83.8% 82.7%
3737968 611.3.1.1 ↗ alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 0.65 39.0 4.71e-01 72.3% 95.0%
3181924 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.63 46.0 4.74e-01 80.0% 79.2%
3706571 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 47.0 3.65e-01 79.2% 50.9%
3480563 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.62 43.0 3.52e-01 82.3% 39.1%
3846816 109.4.1.390 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TH1 0.62 42.0 2.77e-01 76.9% 16.5%
3260290 603.1.1.97 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE 0.61 46.0 3.86e-01 76.9% 84.2%
4173209 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.61 45.0 4.35e-01 83.8% 68.2%
3409367 109.4.1.2093 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N, Xpo1, Importin_rep, Importin_rep_3, TPR_TNPO3_IPO13_4th 0.60 46.0 2.76e-01 80.8% 12.1%
3896071 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.59 46.0 4.44e-01 82.3% 71.3%
3551590 109.4.1.1647 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28330 0.58 43.0 3.77e-01 76.9% 57.9%
3787828 109.4.1.332 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mtf2 0.57 41.0 3.32e-01 77.7% 37.7%
4021006 627.1.1.0 ↗ alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain 0.55 41.0 3.65e-01 77.7% 57.4%
3357660 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.55 41.0 3.06e-01 78.5% 59.5%
4052317 3890.1.1.0 ↗ alpha bundles › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins 0.55 40.0 3.42e-01 76.2% 68.6%
3192241 627.1.1.1 ↗ alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › VPS9 0.54 41.0 3.64e-01 78.5% 72.4%
4015889 627.1.1.1 ↗ alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › VPS9 0.54 40.0 3.59e-01 78.5% 56.8%
3797929 109.4.1.95 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 0.54 39.0 3.52e-01 83.8% 53.9%
3493341 109.4.1.1530 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COG4_m, COG4_C 0.54 41.0 3.37e-01 82.3% 73.5%
3190165 601.1.1.81 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › CcsR_C 0.54 41.0 3.34e-01 80.8% 92.8%
3544887 627.1.1.1 ↗ alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › VPS9 0.53 40.0 3.77e-01 78.5% 70.3%
3315617 603.1.1.1 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin 0.53 40.0 3.36e-01 79.2% 79.6%
3265556 196.1.1.1 ↗ alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS 0.53 36.0 3.57e-01 100.0% 65.2%