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MN180251.1__QHJ75484.1__X__00021
Bact-VirMN180251.1__QHJ75484.1__X__00021
Identity
- Accession:
- MN180251 ↗
- Kingdom:
- phage
Quality
93.9
mean pLDDT
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-126
Domain cluster:
rep: LC644975.1__BCZ76060.1__X__00055__D244-386
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04984.20 best | Phage_sheath_1 | 72.8 | 4.20e-20 | 100.0% | 72.0% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3foaB01 | 3.40.50.11780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.71 | 59.0 | 4.79e-01 | 97.6% | 50.0% |
| 2h6eA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.67 | 37.0 | 3.57e-01 | 99.2% | 47.6% |
| 3tvaA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.52 | 42.0 | 3.20e-01 | 100.0% | 37.9% |
| 3nwpA00 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 39.0 | 3.18e-01 | 100.0% | 42.5% |
| 5uckB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.50 | 43.0 | 3.30e-01 | 100.0% | 40.3% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3944167 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.96 | 93.0 | 6.92e-01 | 100.0% | 47.8% |
| 3978226 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.96 | 93.0 | 6.83e-01 | 100.0% | 49.3% |
| 1518917 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.95 | 92.0 | 6.83e-01 | 100.0% | 46.9% |
| 5004680 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.88 | 84.0 | 6.27e-01 | 100.0% | 46.5% |
| 4995822 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.88 | 84.0 | 6.41e-01 | 100.0% | 53.7% |
| 4882286 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.86 | 81.0 | 7.55e-01 | 100.0% | 82.1% |
| 4888782 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.86 | 81.0 | 6.09e-01 | 100.0% | 52.9% |
| 2832219 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.85 | 81.0 | 5.60e-01 | 100.0% | 51.9% |
| 2468538 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.84 | 80.0 | 6.09e-01 | 100.0% | 49.8% |
| 4889792 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.83 | 78.0 | 6.32e-01 | 100.0% | 56.6% |
| 2468451 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.82 | 78.0 | 6.28e-01 | 100.0% | 56.8% |
| 3280243 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.56 | 30.0 | 2.59e-01 | 99.2% | 30.6% |
| 3962526 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.55 | 33.0 | 2.98e-01 | 99.2% | 42.9% |
| 3857449 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.53 | 46.0 | 3.75e-01 | 93.7% | 52.2% |
| 4562891 | 3698.1.1.0 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain | 0.53 | 34.0 | 2.55e-01 | 100.0% | 25.2% |
| 3944641 | 2002.1.1.176 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_mutase | 0.52 | 42.0 | 3.42e-01 | 100.0% | 44.8% |
| 4447684 | 2003.1.5.55 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA | 0.52 | 34.0 | 3.19e-01 | 100.0% | 52.5% |
D2
medium
residues 146-240
Domain cluster:
rep: NC_049378.1__YP_009875985.1__HYP05_gp076__00076__D1-73
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17482.8 best | Phage_sheath_1C | 53.8 | 2.50e-14 | 92.6% | 83.7% |