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MN184886.1__QEQ94792.1__pEpSNUABM08_45__00045
Bact-VirMN184886.1__QEQ94792.1__pEpSNUABM08_45__00045
Identity
- Accession:
- MN184886 ↗
- Kingdom:
- phage
Quality
77.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Casjensviridae›
Gwanakrovirus›
Erwinia_phage_pEp_SNUABM_08
TaxID: 2593268
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-81
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.69 | 61.0 | 5.61e-01 | 100.0% | 87.6% |
| 2vt8A00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.68 | 58.0 | 4.81e-01 | 96.2% | 87.4% |
| 1ygyB03 | 3.30.1330.90 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › D-3-phosphoglycerate dehydrogenase; domain 3 | 0.68 | 53.0 | 4.45e-01 | 86.1% | 95.7% |
| 3cwxA00 | 3.40.1420.20 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Pathogenicity island component CagD | 0.66 | 56.0 | 4.90e-01 | 97.5% | 79.2% |
| 1xmbA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.65 | 58.0 | 3.99e-01 | 100.0% | 34.3% |
| 2fkiA00 | 3.90.1150.30 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.65 | 55.0 | 4.89e-01 | 96.2% | 89.0% |
| 3mazA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.64 | 53.0 | 4.96e-01 | 92.4% | 91.9% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 52.0 | 4.31e-01 | 89.9% | 81.6% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.63 | 52.0 | 5.25e-01 | 89.9% | 92.5% |
| 6muwB00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.61 | 49.0 | 3.60e-01 | 91.1% | 54.6% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 42.0 | 4.73e-01 | 88.6% | 96.6% |
| 1g0uE00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.60 | 52.0 | 3.74e-01 | 96.2% | 53.5% |
| 7lxuE01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.60 | 51.0 | 3.77e-01 | 96.2% | 58.4% |
| 3qv0A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.60 | 48.0 | 3.77e-01 | 89.9% | 70.9% |
| 1iruI00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.60 | 51.0 | 3.74e-01 | 96.2% | 71.8% |
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 35.0 | 4.25e-01 | 87.3% | 97.9% |
| 8f66A01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.59 | 51.0 | 3.75e-01 | 96.2% | 59.5% |
| 2x3lA01 | 3.90.1150.150 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.59 | 49.0 | 4.56e-01 | 94.9% | 81.0% |
| 6qm7N00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.59 | 49.0 | 3.65e-01 | 94.9% | 75.2% |
| 6z46V01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.58 | 50.0 | 3.90e-01 | 98.7% | 88.5% |
| 3qguA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 48.0 | 4.00e-01 | 93.7% | 62.5% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.58 | 50.0 | 4.30e-01 | 96.2% | 88.9% |
| 1aisA02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.58 | 44.0 | 4.27e-01 | 88.6% | 73.6% |
| 3bs4A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 39.0 | 2.78e-01 | 70.9% | 89.0% |
| 4rs6A01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.57 | 48.0 | 4.32e-01 | 98.7% | 91.5% |
| 4aghA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.57 | 40.0 | 4.06e-01 | 75.9% | 97.5% |
| 4g59C02 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.56 | 43.0 | 3.45e-01 | 82.3% | 67.1% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 37.0 | 4.06e-01 | 91.1% | 87.3% |
| 4z48A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.55 | 46.0 | 3.35e-01 | 94.9% | 41.2% |
| 2vseA03 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 46.0 | 3.77e-01 | 91.1% | 87.9% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.54 | 47.0 | 3.60e-01 | 97.5% | 45.2% |
| 3tg9A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.53 | 47.0 | 3.16e-01 | 100.0% | 84.2% |
| 4oonA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 41.0 | 3.78e-01 | 84.8% | 98.1% |
| 2lqoA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 42.0 | 4.14e-01 | 100.0% | 84.1% |
| 2g9gA00 | 2.60.120.1020 | Mainly Beta › Sandwich › Jelly Rolls › PAW domain | 0.51 | 41.0 | 3.22e-01 | 92.4% | 81.5% |
| 1eigA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 35.0 | 3.60e-01 | 70.9% | 86.3% |
| 1hlcA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 38.0 | 3.32e-01 | 83.5% | 79.1% |
| 2vseA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.50 | 41.0 | 3.50e-01 | 94.9% | 88.7% |
| 2v3aA03 | 3.30.390.120 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.50 | 34.0 | 3.63e-01 | 92.4% | 87.5% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3918694 | 4099.1.1.10 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 | 0.79 | 73.0 | 6.97e-01 | 100.0% | 97.8% |
| 3416297 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.75 | 70.0 | 6.17e-01 | 100.0% | 80.9% |
| 5059099 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.71 | 64.0 | 6.17e-01 | 100.0% | 97.7% |
| 3663084 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.69 | 57.0 | 4.64e-01 | 89.9% | 71.0% |
| 3956352 | 881.1.1.15 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3558 | 0.69 | 49.0 | 4.03e-01 | 74.7% | 51.4% |
| 3715951 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.68 | 60.0 | 5.16e-01 | 98.7% | 84.8% |
| 3594326 | 241.10.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain | 0.68 | 55.0 | 5.57e-01 | 91.1% | 95.0% |
| 3299630 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.67 | 55.0 | 5.01e-01 | 89.9% | 74.3% |
| 3810217 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 41.0 | 5.06e-01 | 84.8% | 100.0% |
| 4465073 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.66 | 56.0 | 5.08e-01 | 92.4% | 73.1% |
| 1906032 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.65 | 57.0 | 4.53e-01 | 100.0% | 56.8% |
| 4939609 | 2008.5.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Uncharacterized protein AF_2093 C-terminal domain › Uncharacterized protein AF_2093 C-terminal domain › DUF6834_C | 0.65 | 58.0 | 4.84e-01 | 98.7% | 84.4% |
| 4302852 | 331.22.1.2 ↗ | a+b two layers › TBP-like › Outer membrane protein assembly factor BamC › Outer membrane protein assembly factor BamC › PF29358 | 0.64 | 53.0 | 4.03e-01 | 89.9% | 45.4% |
| 3697558 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.64 | 55.0 | 5.10e-01 | 100.0% | 97.1% |
| 3256431 | 4.1.1.360 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 | 0.63 | 40.0 | 3.98e-01 | 81.0% | 62.5% |
| 3993250 | 4.1.1.333 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29330 | 0.62 | 40.0 | 4.67e-01 | 93.7% | 94.5% |
| 4945506 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.61 | 51.0 | 3.80e-01 | 94.9% | 76.7% |
| 3231177 | 4.1.1.333 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29330 | 0.60 | 38.0 | 4.52e-01 | 81.0% | 100.0% |
| 4970044 | 3518.1.1.1 ↗ | a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind | 0.60 | 49.0 | 3.87e-01 | 91.1% | 59.0% |
| 3373330 | 4.1.1.337 ↗ | beta barrels › SH3 › SH3 › SH3 › CSD_RNase_II | 0.60 | 39.0 | 4.06e-01 | 91.1% | 70.7% |
| 3979195 | 274.1.1.35 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF2509 | 0.60 | 42.0 | 3.59e-01 | 73.4% | 53.6% |
| 2561577 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.60 | 40.0 | 4.47e-01 | 97.5% | 90.2% |
| 3479088 | 210.1.1.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits | 0.60 | 52.0 | 3.75e-01 | 96.2% | 54.3% |
| 3386462 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.59 | 44.0 | 4.06e-01 | 79.7% | 61.0% |
| 3533318 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.59 | 37.0 | 4.45e-01 | 73.4% | 100.0% |
| 3228478 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.58 | 41.0 | 3.55e-01 | 79.7% | 44.4% |
| 3406071 | 9.23.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 | 0.57 | 45.0 | 4.03e-01 | 88.6% | 96.5% |
| 4992060 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.56 | 42.0 | 3.29e-01 | 79.7% | 90.9% |
| 5014724 | 295.1.1.51 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FtsQ_DivIB_C | 0.56 | 37.0 | 3.49e-01 | 86.1% | 54.0% |
| 3672926 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 44.0 | 3.21e-01 | 86.1% | 50.7% |
| 4504378 | 331.4.1.9 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C | 0.56 | 45.0 | 4.38e-01 | 89.9% | 86.7% |
| 3588456 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.56 | 45.0 | 3.66e-01 | 100.0% | 45.8% |
| 3920026 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.55 | 41.0 | 3.07e-01 | 92.4% | 30.5% |
| 4929875 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.53 | 38.0 | 3.53e-01 | 74.7% | 80.0% |
| 3779830 | 4.1.1.304 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O | 0.53 | 39.0 | 3.72e-01 | 88.6% | 66.7% |
| 3546306 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.53 | 43.0 | 4.09e-01 | 91.1% | 75.8% |
| 5049640 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 32.0 | 3.29e-01 | 74.7% | 60.8% |
| 5016556 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 43.0 | 4.12e-01 | 94.9% | 78.9% |
| 3480491 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 40.0 | 4.15e-01 | 93.7% | 86.7% |
| 3791735 | 376.1.1.43 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PRT6_C | 0.52 | 44.0 | 3.61e-01 | 100.0% | 79.3% |
| 1411067 | 244.2.1.6 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rbx_binding | 0.50 | 36.0 | 3.64e-01 | 98.7% | 78.2% |
| 3504843 | 244.2.1.6 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rbx_binding | 0.50 | 35.0 | 3.67e-01 | 94.9% | 82.9% |