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MN184886.1__QEQ94807.1__pEpSNUABM08_60__00060
Bact-VirMN184886.1__QEQ94807.1__pEpSNUABM08_60__00060
Identity
- Accession:
- MN184886 ↗
- Kingdom:
- phage
Quality
69.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Casjensviridae›
Gwanakrovirus›
Erwinia_phage_pEp_SNUABM_08
TaxID: 2593268
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-75
Domain cluster:
representative
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bi0A01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.74 | 52.0 | 3.94e-01 | 87.1% | 33.3% |
| 6jqlA03 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.73 | 50.0 | 3.67e-01 | 84.3% | 28.1% |
| 2b1xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 47.0 | 3.54e-01 | 84.3% | 29.9% |
| 5cxoB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 44.0 | 3.54e-01 | 84.3% | 35.8% |
| 4fm4B02 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 50.0 | 4.42e-01 | 87.1% | 63.4% |
| 3rgaA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 46.0 | 3.73e-01 | 87.1% | 42.1% |
| 4damC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 45.0 | 4.09e-01 | 90.0% | 56.0% |
| 3ub1A01 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 49.0 | 3.97e-01 | 88.6% | 47.8% |
| 3ff2A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 40.0 | 3.42e-01 | 85.7% | 41.0% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 48.0 | 4.23e-01 | 94.3% | 57.3% |
| 3fhwA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 46.0 | 4.19e-01 | 94.3% | 60.6% |
| 3k8aB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 46.0 | 4.15e-01 | 94.3% | 60.2% |
| 4zboC00 | 2.40.400.10 | Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like | 0.59 | 50.0 | 3.52e-01 | 100.0% | 85.3% |
| 1jkgA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 41.0 | 3.34e-01 | 85.7% | 37.4% |
| 5ig0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 37.0 | 3.04e-01 | 84.3% | 35.1% |
| 2vqeE01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 38.0 | 3.99e-01 | 85.7% | 75.0% |
| 3d9rB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 38.0 | 3.20e-01 | 84.3% | 36.8% |
| 3kojB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 43.0 | 4.02e-01 | 92.9% | 64.4% |
| 3j7yd00 | 3.10.450.240 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 43.0 | 3.36e-01 | 84.3% | 38.3% |
| 1q42A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 44.0 | 3.44e-01 | 88.6% | 40.9% |
| 4jbmB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 39.0 | 3.61e-01 | 95.7% | 55.2% |
| 4tm5A01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.55 | 41.0 | 3.50e-01 | 85.7% | 81.1% |
| 6toaF01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.55 | 42.0 | 3.47e-01 | 84.3% | 83.1% |
| 3ulpD00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 42.0 | 3.71e-01 | 95.7% | 54.9% |
| 3ejvA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 42.0 | 3.26e-01 | 85.7% | 39.6% |
| 3e8tA00 | 3.15.10.30 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain | 0.54 | 42.0 | 3.06e-01 | 88.6% | 43.5% |
| 1b1eA00 | 3.10.130.10 | Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain | 0.53 | 42.0 | 3.49e-01 | 84.3% | 52.8% |
| 2vq9A00 | 3.10.130.10 | Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain | 0.53 | 42.0 | 3.49e-01 | 84.3% | 53.7% |
| 4p2iA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 45.0 | 3.90e-01 | 98.6% | 75.2% |
| 3n72A00 | 3.15.10.20 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Activator of Hsp90 ATPase Aha1, N-terminal domain | 0.53 | 41.0 | 3.27e-01 | 84.3% | 66.4% |
| 3qfgA00 | 2.60.40.1240 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 43.0 | 3.47e-01 | 92.9% | 83.4% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.53 | 33.0 | 3.86e-01 | 80.0% | 95.7% |
| 1kdgA02 | 3.30.410.10 | Alpha Beta › 2-Layer Sandwich › Cholesterol Oxidase; domain 2 › Cholesterol Oxidase; domain 2 | 0.53 | 40.0 | 2.89e-01 | 81.4% | 44.1% |
| 3soyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 40.0 | 3.26e-01 | 87.1% | 41.5% |
| 5azpA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.52 | 35.0 | 3.41e-01 | 85.7% | 60.5% |
| 1dzaA00 | 3.10.130.10 | Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain | 0.52 | 41.0 | 3.41e-01 | 84.3% | 55.8% |
| 5ixgA00 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.52 | 39.0 | 3.11e-01 | 85.7% | 61.3% |
| 1av4A03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.51 | 38.0 | 2.39e-01 | 80.0% | 69.1% |
| 2dj6B00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.51 | 39.0 | 3.45e-01 | 87.1% | 93.0% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 39.0 | 3.29e-01 | 92.9% | 45.8% |
| 1vwxB03 | 3.30.1430.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L3; Chain: B; domain 2, › | 0.51 | 42.0 | 3.49e-01 | 91.4% | 93.5% |
| 2e2dC02 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 39.0 | 3.68e-01 | 94.3% | 67.0% |
| 4iu2B01 | 2.60.40.3810 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 43.0 | 3.70e-01 | 100.0% | 94.0% |
| 6yfiB01 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.50 | 33.0 | 2.68e-01 | 72.9% | 33.3% |
| 1r4sA00 | 3.10.270.10 | Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; | 0.50 | 38.0 | 2.72e-01 | 92.9% | 48.3% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3794483 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.67 | 47.0 | 3.61e-01 | 84.3% | 32.9% |
| 3404339 | 9.2.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin | 0.65 | 46.0 | 3.65e-01 | 84.3% | 37.8% |
| 4051041 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.65 | 45.0 | 3.54e-01 | 78.6% | 32.9% |
| 3785806 | 5.1.2.20 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BMT | 0.65 | 55.0 | 3.23e-01 | 92.9% | 57.6% |
| 3550168 | 4.8.1.27 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › CUL7_CUL9_N | 0.63 | 55.0 | 5.06e-01 | 97.1% | 83.3% |
| 3683559 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.63 | 40.0 | 2.80e-01 | 81.4% | 20.0% |
| 3489971 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 52.0 | 4.41e-01 | 92.9% | 56.7% |
| 3595817 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 49.0 | 4.31e-01 | 95.7% | 56.4% |
| 5014602 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.62 | 49.0 | 4.14e-01 | 97.1% | 49.2% |
| 3517335 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.61 | 46.0 | 3.99e-01 | 82.9% | 66.1% |
| 5077163 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.61 | 47.0 | 3.89e-01 | 95.7% | 45.2% |
| 4937367 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.60 | 48.0 | 4.05e-01 | 95.7% | 50.4% |
| 5037015 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.60 | 49.0 | 3.97e-01 | 95.7% | 46.7% |
| 5029179 | 5090.1.1.0 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains | 0.60 | 50.0 | 4.29e-01 | 91.4% | 70.9% |
| 4018634 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.59 | 42.0 | 3.57e-01 | 78.6% | 44.3% |
| 3214839 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.59 | 38.0 | 3.00e-01 | 78.6% | 28.7% |
| 3927710 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.59 | 50.0 | 3.84e-01 | 95.7% | 54.5% |
| 3652419 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.58 | 41.0 | 3.49e-01 | 87.1% | 43.3% |
| 5017212 | 11.1.1.1443 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29994 | 0.58 | 43.0 | 3.67e-01 | 85.7% | 47.8% |
| 3764436 | 883.1.1.1 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP | 0.58 | 46.0 | 3.51e-01 | 88.6% | 71.4% |
| 3569021 | 883.1.1.1 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP | 0.58 | 48.0 | 3.61e-01 | 94.3% | 69.7% |
| 3301984 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.58 | 36.0 | 3.97e-01 | 78.6% | 80.0% |
| 5043294 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.58 | 49.0 | 4.14e-01 | 100.0% | 57.7% |
| 3760087 | 883.1.1.1 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP | 0.58 | 48.0 | 3.52e-01 | 94.3% | 62.9% |
| 3479009 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.57 | 45.0 | 3.64e-01 | 87.1% | 73.1% |
| 3773175 | 883.1.1.1 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP | 0.57 | 49.0 | 3.70e-01 | 100.0% | 73.5% |
| 3207181 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.57 | 42.0 | 3.92e-01 | 84.3% | 62.2% |
| 3588483 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.57 | 45.0 | 3.70e-01 | 88.6% | 46.3% |
| 5072674 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.57 | 46.0 | 3.82e-01 | 95.7% | 49.2% |
| 3704007 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.56 | 45.0 | 3.17e-01 | 95.7% | 26.8% |
| 3509026 | 1.1.1.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 | 0.56 | 43.0 | 3.38e-01 | 87.1% | 53.5% |
| 3621948 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.56 | 47.0 | 3.73e-01 | 97.1% | 70.3% |
| 3281948 | 243.1.1.28 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 | 0.55 | 37.0 | 3.20e-01 | 85.7% | 41.7% |
| 3645656 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.55 | 43.0 | 4.18e-01 | 87.1% | 86.3% |
| 3385898 | 7503.1.1.1 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › CsgG | 0.54 | 42.0 | 3.37e-01 | 87.1% | 85.2% |
| 3781073 | 223.2.1.29 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENND11 | 0.54 | 41.0 | 3.29e-01 | 81.4% | 46.4% |
| 3624550 | 6043.1.1.4 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like › PHAF1 | 0.54 | 42.0 | 3.40e-01 | 88.6% | 87.3% |
| 3216926 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 42.0 | 3.38e-01 | 90.0% | 76.7% |
| 3729468 | 230.1.1.1 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › Uricase | 0.53 | 39.0 | 3.27e-01 | 82.9% | 79.3% |
| 3806458 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.52 | 35.0 | 2.92e-01 | 78.6% | 35.2% |
| 3604270 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.52 | 35.0 | 2.94e-01 | 80.0% | 38.5% |
| 4962934 | 331.2.1.15 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › DUF7845 | 0.52 | 37.0 | 2.92e-01 | 78.6% | 33.8% |
| 3998371 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.52 | 43.0 | 3.15e-01 | 94.3% | 51.0% |
| 3653604 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.52 | 39.0 | 3.07e-01 | 87.1% | 37.4% |
| 3742225 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.52 | 34.0 | 2.23e-01 | 70.0% | 15.2% |
| 3992476 | 1116.1.1.2 ↗ | a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › MCLN_ECD | 0.51 | 38.0 | 3.08e-01 | 80.0% | 75.2% |
| 3377619 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.51 | 39.0 | 2.92e-01 | 84.3% | 31.9% |
| 3761115 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 41.0 | 2.56e-01 | 90.0% | 19.1% |
| 3372143 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.51 | 39.0 | 3.31e-01 | 85.7% | 48.8% |
| 3594903 | 12.1.1.94 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF4139 | 0.51 | 41.0 | 3.12e-01 | 85.7% | 87.7% |
| 3619356 | 1116.1.1.2 ↗ | a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › MCLN_ECD | 0.50 | 39.0 | 2.88e-01 | 87.1% | 86.7% |
| 3249225 | 223.2.1.6 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN | 0.50 | 39.0 | 3.08e-01 | 88.6% | 38.1% |