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MN228696.1__QEP29897.1__Smphiort11_099__00099
Bact-VirMN228696.1__QEP29897.1__Smphiort11_099__00099
Identity
- Accession:
- MN228696 ↗
- Kingdom:
- phage
Quality
90.8
mean pLDDT
Taxonomy
TaxID: 2599764
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-65
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bqbA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.67 | 50.0 | 3.69e-01 | 80.4% | 68.8% |
| 3onkA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.67 | 52.0 | 4.02e-01 | 98.2% | 36.5% |
| 3wscA00 | 1.20.1420.20 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › M75 peptidase, HXXE motif | 0.65 | 48.0 | 3.14e-01 | 80.4% | 47.8% |
| 5mi7A03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.63 | 55.0 | 3.59e-01 | 100.0% | 24.2% |
| 2oznB02 | 1.10.1330.10 | Mainly Alpha › Orthogonal Bundle › Type 1 dockerin domain › Dockerin domain | 0.59 | 40.0 | 4.18e-01 | 75.0% | 80.4% |
| 6ks6Z01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.59 | 49.0 | 3.24e-01 | 100.0% | 23.4% |
| 2wiyA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.57 | 47.0 | 2.92e-01 | 100.0% | 22.3% |
| 4atgA00 | 1.25.40.770 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TAF6, C-terminal HEAT repeat domain | 0.57 | 45.0 | 3.16e-01 | 91.1% | 26.2% |
| 1o3sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 48.0 | 4.56e-01 | 100.0% | 79.7% |
| 2vk9A03 | 1.10.3730.30 | Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › | 0.57 | 42.0 | 3.53e-01 | 80.4% | 68.4% |
| 2bbrA01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.56 | 39.0 | 3.45e-01 | 91.1% | 48.3% |
| 3kzxA02 | 1.10.150.730 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.55 | 44.0 | 4.34e-01 | 96.4% | 80.6% |
| 2mpcA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.53 | 40.0 | 3.51e-01 | 83.9% | 80.0% |
| 3x17A02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.53 | 42.0 | 2.52e-01 | 91.1% | 12.3% |
| 3wuhA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 39.0 | 2.84e-01 | 91.1% | 26.8% |
| 1dp3A00 | 1.10.10.450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › TraM protein, DNA-binding | 0.52 | 34.0 | 3.51e-01 | 87.5% | 69.1% |
| 3mgkB00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.51 | 43.0 | 2.95e-01 | 94.6% | 90.0% |
| 4c0kA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.51 | 39.0 | 3.31e-01 | 85.7% | 86.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3743981 | 5081.1.1.2 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DER1 | 0.60 | 49.0 | 3.55e-01 | 100.0% | 33.2% |
| 3446958 | 109.4.1.349 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIX1 | 0.60 | 51.0 | 3.22e-01 | 100.0% | 26.2% |
| 3945404 | 502.1.1.0 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain | 0.57 | 40.0 | 3.93e-01 | 85.7% | 67.7% |
| 3447438 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.55 | 39.0 | 3.27e-01 | 100.0% | 39.1% |
| 2611308 | 7000.1.1.2 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › RBD_LARS1 | 0.51 | 41.0 | 3.89e-01 | 100.0% | 72.2% |
| 3998171 | 101.1.2.490 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_CHMP7 | 0.51 | 42.0 | 3.96e-01 | 100.0% | 76.0% |