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MN234166.1__QFG08516.1__PBI_ASERPROCKY_29__00029

Bact-Vir

MN234166.1__QFG08516.1__PBI_ASERPROCKY_29__00029

Identity

Accession:
MN234166 ↗
Kingdom:
phage

Quality

64.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Demosthenesvirus› Gordonia_phage_ASerpRocky

TaxID: 2599841

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 503-661
PDB
Domain cluster: rep: JSantini_GMIN_scaffold_8_prodigal-single.1__X__X__00003__D17-151
D2 medium residues 24-124
PDB
D3 medium residues 144-233
PDB
D4 medium residues 234-290
PDB
D5 medium residues 291-419
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4azzA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.67 52.0 4.82e-01 96.1% 63.6%
1ospO01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.63 40.0 4.36e-01 92.2% 78.1%
3i8tA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 39.0 3.78e-01 95.3% 60.0%
3g7gH00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.58 48.0 4.53e-01 87.6% 86.8%
3ap9A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 38.0 3.66e-01 98.4% 60.9%
3ia8A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 46.0 4.28e-01 91.5% 71.6%
4j87A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 47.0 3.52e-01 100.0% 72.5%
4zovB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 46.0 3.35e-01 100.0% 63.8%
4gq1A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 46.0 3.38e-01 100.0% 60.8%
1nr0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 46.0 3.53e-01 100.0% 55.0%
1mg2A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 45.0 3.26e-01 100.0% 46.9%
5esyA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.50 41.0 3.48e-01 87.6% 80.4%
1u17A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 37.0 3.32e-01 100.0% 54.1%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3583444 9.1.1.12 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd 0.57 41.0 4.37e-01 85.3% 83.5%
3484308 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.55 50.0 3.39e-01 100.0% 75.7%
3477494 5.1.5.135 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Sema 0.55 50.0 3.40e-01 100.0% 76.5%
4861416 5.1.1.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › WD40 0.54 49.0 3.54e-01 100.0% 76.2%
3393982 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 48.0 3.37e-01 100.0% 78.5%
3891230 5.1.5.43 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WDR93 0.52 47.0 3.15e-01 100.0% 71.9%
3708971 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 47.0 3.25e-01 100.0% 63.1%
3996653 5.1.4.377 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR35_TULP_N 0.52 46.0 3.44e-01 100.0% 63.5%
3598272 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 47.0 3.26e-01 100.0% 63.5%
3619936 5.1.4.12 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.51 47.0 3.24e-01 100.0% 71.1%
3575937 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 47.0 3.53e-01 99.2% 95.7%
3537640 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 45.0 3.24e-01 95.3% 39.2%
3533653 5.1.4.12 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.51 47.0 3.23e-01 100.0% 74.3%
3620195 5.1.4.289 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, eIF2A, ANAPC4_WD40 0.51 47.0 3.54e-01 100.0% 54.7%
3580666 5.1.4.442 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, KNTC1_N 0.51 47.0 3.68e-01 100.0% 62.1%
3398142 5.1.4.327 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_MABP1-WDR62_2nd 0.51 46.0 3.07e-01 97.7% 66.0%
3792453 5.1.4.442 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, KNTC1_N 0.51 47.0 3.57e-01 100.0% 56.7%
3391303 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 46.0 3.33e-01 100.0% 70.1%
3502613 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 46.0 3.38e-01 100.0% 65.0%
3575745 5.1.4.90 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Itfg2 0.50 45.0 3.32e-01 100.0% 66.9%
3926057 5.1.5.75 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40 0.50 45.0 3.34e-01 97.7% 50.5%
4018043 5.1.4.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.50 45.0 3.40e-01 98.4% 75.8%
D6 medium residues 420-485
PDB