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MN234168.1__QFG08751.1__PBI_INGRID_82__00082
Bact-VirMN234168.1__QFG08751.1__PBI_INGRID_82__00082
Identity
- Accession:
- MN234168 ↗
- Kingdom:
- phage
Quality
80.9
mean pLDDT
Taxonomy
TaxID: 2599825
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-69
Domain cluster:
rep: SRR1747065_scaffold_38_prodigal-single.1__X__X__00176__D6-88
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07463.17 best | NUMOD4 | 25.6 | 1.60e-05 | 66.1% | 95.9% |
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u3eM01 | 3.90.75.20 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › | 0.86 | 79.0 | 6.59e-01 | 100.0% | 78.3% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.70 | 47.0 | 4.83e-01 | 93.8% | 73.8% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 40.0 | 4.24e-01 | 83.1% | 67.9% |
| 3bxwA03 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.67 | 41.0 | 4.34e-01 | 81.5% | 70.9% |
| 3zi1A02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 45.0 | 3.48e-01 | 81.5% | 69.7% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.59 | 41.0 | 4.26e-01 | 92.3% | 81.4% |
| 3qokA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.59 | 42.0 | 3.79e-01 | 78.5% | 64.9% |
| 4mtsA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 43.0 | 3.49e-01 | 78.5% | 84.5% |
| 2k4rA00 | 2.40.20.10 | Mainly Beta › Beta Barrel › Plasminogen Kringle 4 › Plasminogen Kringle 4 | 0.59 | 41.0 | 3.91e-01 | 73.8% | 98.7% |
| 3oajA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 43.0 | 3.39e-01 | 80.0% | 41.7% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 45.0 | 4.63e-01 | 93.8% | 87.1% |
| 2p25A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 43.0 | 3.54e-01 | 80.0% | 84.9% |
| 1vkdA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 43.0 | 2.84e-01 | 86.2% | 28.8% |
| 1irxA02 | 2.30.30.300 | Mainly Beta › Roll › SH3 type barrels. › class i lysyl-tRNA synthetase like | 0.56 | 35.0 | 3.98e-01 | 90.8% | 93.0% |
| 5jh8A02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.56 | 40.0 | 3.96e-01 | 75.4% | 76.1% |
| 3cz8A02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.56 | 40.0 | 4.19e-01 | 75.4% | 94.7% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 45.0 | 4.35e-01 | 89.2% | 96.0% |
| 1b69A00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.55 | 39.0 | 3.85e-01 | 73.8% | 81.2% |
| 3ey7A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 41.0 | 3.44e-01 | 83.1% | 83.5% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 42.0 | 4.08e-01 | 93.8% | 76.1% |
| 1hp7A01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.54 | 40.0 | 3.61e-01 | 81.5% | 100.0% |
| 7tzoA01 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.54 | 41.0 | 3.04e-01 | 83.1% | 100.0% |
| 5w8mA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.53 | 41.0 | 2.97e-01 | 84.6% | 49.5% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 41.0 | 3.98e-01 | 93.8% | 75.0% |
| 4f3nA00 | 3.40.50.12710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 39.0 | 2.50e-01 | 81.5% | 46.3% |
| 1e69A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 39.0 | 2.70e-01 | 100.0% | 20.5% |
| 3oulA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 43.0 | 3.06e-01 | 96.9% | 50.5% |
| 5inwA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.52 | 38.0 | 3.28e-01 | 80.0% | 90.7% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 36.0 | 3.33e-01 | 73.8% | 74.4% |
| 1f0cA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.51 | 39.0 | 3.33e-01 | 86.2% | 87.3% |
| 7x4pA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.51 | 41.0 | 3.14e-01 | 90.8% | 94.9% |
| 4v1ap00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 41.0 | 3.74e-01 | 96.9% | 90.7% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.51 | 41.0 | 3.89e-01 | 93.8% | 93.8% |
| 2jzlA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.50 | 43.0 | 3.69e-01 | 100.0% | 65.8% |
| 4rs6A01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.50 | 43.0 | 3.55e-01 | 95.4% | 74.6% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 37.0 | 3.76e-01 | 86.2% | 84.1% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3790904 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.76 | 47.0 | 4.86e-01 | 89.2% | 66.7% |
| 3694693 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.73 | 50.0 | 5.03e-01 | 90.8% | 70.8% |
| 4014812 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.70 | 47.0 | 4.85e-01 | 90.8% | 75.0% |
| 4114145 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 46.0 | 3.57e-01 | 86.2% | 34.6% |
| 3991073 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.67 | 43.0 | 4.64e-01 | 90.8% | 78.2% |
| 5052257 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 42.0 | 4.42e-01 | 93.8% | 75.0% |
| 3216714 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 35.0 | 4.30e-01 | 86.2% | 100.0% |
| 3664617 | 2.1.1.223 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28721 | 0.62 | 41.0 | 3.76e-01 | 87.7% | 51.8% |
| 3787501 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.61 | 42.0 | 3.34e-01 | 90.8% | 34.3% |
| 3742938 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.60 | 46.0 | 4.64e-01 | 93.8% | 81.5% |
| 4605602 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 44.0 | 4.41e-01 | 93.8% | 76.9% |
| 3594326 | 241.10.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain | 0.60 | 41.0 | 3.85e-01 | 72.3% | 85.0% |
| 3483806 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.59 | 47.0 | 3.71e-01 | 92.3% | 85.3% |
| 4963287 | 375.1.1.334 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › HVO_0758 | 0.58 | 41.0 | 4.33e-01 | 83.1% | 89.1% |
| 3604542 | 601.7.2.1 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › HEPN domain in CRISPR-associated protein Csx1 › Csx1_HEPN | 0.57 | 45.0 | 3.51e-01 | 87.7% | 55.3% |
| 3890928 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.57 | 40.0 | 2.96e-01 | 73.8% | 30.0% |
| 4034031 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.56 | 44.0 | 4.41e-01 | 89.2% | 84.6% |
| 3218646 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 39.0 | 3.92e-01 | 98.5% | 72.3% |
| 3981113 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.55 | 41.0 | 3.50e-01 | 80.0% | 84.4% |
| 3396897 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.55 | 43.0 | 4.44e-01 | 92.3% | 88.9% |
| 3724765 | 7515.1.1.5 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase,SGSH_C | 0.55 | 47.0 | 2.81e-01 | 100.0% | 21.3% |
| 4888987 | 4.1.1.6 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C | 0.55 | 42.0 | 4.12e-01 | 93.8% | 76.8% |
| 3240511 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.54 | 42.0 | 3.67e-01 | 86.2% | 81.9% |
| 3415836 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.54 | 41.0 | 3.53e-01 | 81.5% | 71.4% |
| 4891173 | 206.1.1.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase,FATC | 0.54 | 46.0 | 3.15e-01 | 100.0% | 90.4% |
| 3368395 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 42.0 | 2.73e-01 | 93.8% | 17.5% |
| 5038962 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 33.0 | 3.69e-01 | 83.1% | 86.7% |
| 4029169 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.53 | 34.0 | 2.04e-01 | 93.8% | 7.6% |
| 3698762 | 4.1.1.6 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C | 0.53 | 42.0 | 3.58e-01 | 93.8% | 53.4% |
| 2675820 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.53 | 40.0 | 3.63e-01 | 93.8% | 58.2% |
| 4929550 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.53 | 43.0 | 4.23e-01 | 96.9% | 85.7% |
| 3606266 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 43.0 | 2.58e-01 | 90.8% | 37.3% |
| 5082700 | 2003.1.3.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain | 0.52 | 42.0 | 2.58e-01 | 89.2% | 22.0% |
| 4931302 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.52 | 33.0 | 3.61e-01 | 87.7% | 86.0% |
| 4969515 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.51 | 41.0 | 2.50e-01 | 89.2% | 20.5% |
| 5036655 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 34.0 | 3.49e-01 | 93.8% | 75.0% |
| 4033827 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 37.0 | 3.16e-01 | 81.5% | 73.3% |
| 5078315 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 43.0 | 2.55e-01 | 98.5% | 34.0% |
| 3958768 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 39.0 | 3.77e-01 | 90.8% | 75.0% |
| 3721277 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.50 | 41.0 | 2.77e-01 | 98.5% | 47.4% |
D2
high
residues 90-148
Domain cluster:
rep: OP756059.1__UZO33122.1__CBSLWZGG_CDS168__00169__D10-71