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MN234173.1__QFG09151.1__PBI_SPORTO_43__00043
Bact-VirMN234173.1__QFG09151.1__PBI_SPORTO_43__00043
Identity
- Accession:
- MN234173 ↗
- Kingdom:
- phage
Quality
76.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-54
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6s2wA01 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.69 | 48.0 | 4.18e-01 | 73.6% | 75.6% |
| 2kqrA01 | 3.30.1910.20 | Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain | 0.61 | 46.0 | 4.15e-01 | 83.0% | 86.5% |
| 4jc0A02 | 3.30.750.210 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.58 | 39.0 | 3.12e-01 | 71.7% | 38.7% |
| 4n4nB00 | 3.90.640.100 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › | 0.57 | 39.0 | 3.91e-01 | 73.6% | 89.3% |
| 3zqmA00 | 6.10.140.2160 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 40.0 | 3.93e-01 | 75.5% | 83.1% |
| 4zyaB00 | 3.30.1910.20 | Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain | 0.55 | 48.0 | 4.27e-01 | 98.1% | 86.8% |
| 2eshA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 40.0 | 3.32e-01 | 90.6% | 69.3% |
| 1zatA01 | 3.10.20.800 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 38.0 | 3.08e-01 | 84.9% | 72.0% |
| 7bi2A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 39.0 | 3.27e-01 | 92.5% | 59.8% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3226989 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.70 | 48.0 | 4.81e-01 | 94.3% | 70.9% |
| 5045922 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 44.0 | 4.88e-01 | 73.6% | 92.5% |
| 4245473 | 375.10.1.3 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf_DPOE_2 | 0.61 | 50.0 | 4.45e-01 | 90.6% | 82.7% |
| None | — | 0.60 | 41.0 | 2.75e-01 | 73.6% | 36.7% | |
| 3291533 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.60 | 43.0 | 3.81e-01 | 79.2% | 49.4% |
| 4981949 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 43.0 | 3.88e-01 | 79.2% | 100.0% |
| 3683581 | 7512.1.1.32 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 | 0.58 | 40.0 | 2.68e-01 | 73.6% | 34.5% |
| 4934260 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 39.0 | 3.97e-01 | 79.2% | 70.4% |
| 4088784 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 36.0 | 3.76e-01 | 73.6% | 80.0% |
| 5074812 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.52 | 45.0 | 2.82e-01 | 98.1% | 21.4% |
| 3301519 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.52 | 36.0 | 3.21e-01 | 75.5% | 97.5% |
| 3898657 | 318.1.1.0 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 | 0.51 | 33.0 | 2.97e-01 | 79.2% | 48.0% |
| 3614927 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.51 | 38.0 | 3.26e-01 | 92.5% | 83.6% |
| 4424001 | 101.1.9.83 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › TRM | 0.50 | 37.0 | 3.01e-01 | 86.8% | 45.8% |
D2
high
residues 65-141
Domain cluster:
rep: OR253909.1__WNM74555.1__SEA_MOLEFICENT_51__00051__D3-75
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19791.5 best | DUF6275 | 82.8 | 1.60e-23 | 94.8% | 86.4% |
D3
medium
residues 160-186_203-229