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MN234176.1__QFG09445.1__PBI_YUNA_63__00062

Bact-Vir

MN234176.1__QFG09445.1__PBI_YUNA_63__00062

Identity

Accession:
MN234176 ↗
Kingdom:
phage

Quality

88.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-86
PDB
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.86 57.0 6.91e-01 78.6% 100.0%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.85 51.0 6.52e-01 72.6% 100.0%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.84 54.0 5.91e-01 83.3% 79.7%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.82 59.0 6.36e-01 88.1% 86.3%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.82 51.0 5.97e-01 84.5% 89.8%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 54.0 6.35e-01 88.1% 100.0%
2ky9A01 2.30.30.1130 Mainly Beta › Roll › SH3 type barrels. › 0.77 53.0 5.91e-01 76.2% 89.6%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 50.0 5.64e-01 83.3% 87.5%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.76 60.0 5.46e-01 95.2% 64.2%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 51.0 5.63e-01 89.3% 86.8%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.72 50.0 5.76e-01 86.9% 100.0%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 57.0 5.92e-01 86.9% 89.6%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.72 54.0 6.00e-01 82.1% 100.0%
5z8lA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.72 66.0 5.82e-01 100.0% 91.6%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 52.0 4.84e-01 89.3% 63.0%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 44.0 5.36e-01 71.4% 100.0%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.71 64.0 5.33e-01 100.0% 80.7%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.70 49.0 4.70e-01 84.5% 62.2%
3pieC09 2.30.30.750 Mainly Beta › Roll › SH3 type barrels. › 0.69 57.0 5.37e-01 86.9% 89.9%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 53.0 5.71e-01 84.5% 94.4%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 51.0 5.36e-01 79.8% 92.1%
3jb9F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 52.0 5.26e-01 86.9% 86.6%
1vq8T00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 52.0 4.60e-01 86.9% 66.4%
1vwxY00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 51.0 4.30e-01 86.9% 61.9%
2as9B01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.61 41.0 3.89e-01 82.1% 58.4%
3a2yA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.61 48.0 3.68e-01 84.5% 46.5%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 49.0 4.70e-01 96.4% 77.1%
3k67A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 43.0 3.47e-01 75.0% 82.7%
1zvcA00 2.40.480.10 Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like 0.59 42.0 3.37e-01 73.8% 58.5%
2gs5A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.58 51.0 3.93e-01 96.4% 90.4%
3ir3A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 40.0 3.47e-01 72.6% 96.8%
2ox7A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.56 41.0 4.48e-01 100.0% 94.2%
2bhgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 41.0 3.83e-01 76.2% 86.3%
1wjsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 50.0 4.39e-01 100.0% 70.1%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.55 47.0 3.49e-01 92.9% 57.0%
1u17A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 47.0 3.77e-01 100.0% 90.3%
1jmxA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.54 42.0 3.92e-01 85.7% 99.1%
5dzeA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 44.0 3.40e-01 94.0% 83.9%
2fwvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 42.0 3.26e-01 86.9% 77.4%
2q78F00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 39.0 3.30e-01 78.6% 85.3%
2mc2A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 37.0 2.86e-01 76.2% 99.5%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.51 44.0 3.70e-01 98.8% 97.4%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 36.0 3.36e-01 73.8% 88.0%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.51 38.0 3.40e-01 81.0% 82.0%
2qwzA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 35.0 3.10e-01 73.8% 96.2%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1108894 4.1.1.122 beta barrels › SH3 › SH3 › SH3 › SH3_17 0.85 54.0 6.68e-01 76.2% 100.0%
3393319 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.83 62.0 5.62e-01 95.2% 60.0%
3440094 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.82 56.0 6.63e-01 86.9% 100.0%
3342793 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.81 58.0 4.32e-01 88.1% 32.6%
4059465 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.81 57.0 6.31e-01 82.1% 89.7%
3712782 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 55.0 5.64e-01 83.3% 75.0%
3999725 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 60.0 6.05e-01 94.0% 78.8%
3616007 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.79 50.0 6.12e-01 77.4% 100.0%
4929743 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 65.0 5.19e-01 90.5% 68.7%
3845425 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.77 61.0 5.93e-01 95.2% 76.7%
4984882 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.77 60.0 6.59e-01 90.5% 98.6%
4002985 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 53.0 6.16e-01 78.6% 100.0%
3554026 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.76 52.0 6.09e-01 85.7% 100.0%
3926175 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 58.0 5.84e-01 90.5% 80.0%
3910433 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 55.0 6.19e-01 85.7% 98.5%
3553983 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.75 52.0 6.06e-01 79.8% 100.0%
3937006 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 54.0 5.61e-01 77.4% 97.4%
3601070 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 53.0 6.02e-01 76.2% 100.0%
3368864 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.73 53.0 5.99e-01 82.1% 98.5%
3275615 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.73 54.0 4.60e-01 90.5% 50.4%
3834112 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.72 55.0 5.68e-01 79.8% 100.0%
4574546 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 53.0 5.95e-01 85.7% 100.0%
4157193 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 54.0 5.83e-01 94.0% 94.3%
3251940 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.72 53.0 5.55e-01 84.5% 85.3%
3595169 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 53.0 5.80e-01 77.4% 97.1%
4196537 4.1.1.52 beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.71 54.0 5.74e-01 79.8% 90.7%
3781440 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.71 58.0 5.99e-01 86.9% 96.2%
4098870 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.71 52.0 4.99e-01 84.5% 67.4%
3246086 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 60.0 5.78e-01 97.6% 81.1%
3709279 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 62.0 6.07e-01 94.0% 91.1%
3841414 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.71 53.0 5.82e-01 85.7% 94.3%
3342814 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.71 57.0 5.48e-01 85.7% 89.5%
4342110 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 52.0 5.57e-01 86.9% 90.4%
3933047 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.70 56.0 4.47e-01 84.5% 76.2%
3520654 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.70 56.0 4.55e-01 84.5% 70.0%
490 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 56.0 5.93e-01 96.4% 97.3%
3484620 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 59.0 5.67e-01 91.7% 96.8%
3244497 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.69 55.0 4.49e-01 84.5% 70.7%
4654204 4.1.1.52 beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.69 56.0 5.47e-01 86.9% 80.9%
3357709 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 55.0 5.49e-01 84.5% 88.2%
4335951 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 53.0 5.64e-01 91.7% 95.9%
3230113 4.1.1.315 beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 0.68 57.0 3.57e-01 88.1% 54.7%
3489469 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 48.0 4.47e-01 73.8% 82.9%
4114121 4.1.1.52 beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.68 55.0 5.65e-01 85.7% 90.0%
4078260 4.1.1.52 beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.68 54.0 5.35e-01 86.9% 80.0%
4282868 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 53.0 5.69e-01 94.0% 100.0%
3678872 4.1.1.239 beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O 0.68 54.0 5.76e-01 84.5% 100.0%
3333322 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.67 55.0 4.60e-01 85.7% 85.9%
4225787 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 52.0 4.95e-01 85.7% 71.0%
4162968 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 55.0 5.64e-01 89.3% 97.5%
4140958 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 53.0 5.56e-01 94.0% 96.0%
3595833 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.66 57.0 5.44e-01 96.4% 82.1%
3587906 4.1.1.46 beta barrels › SH3 › SH3 › SH3 › VEG 0.66 53.0 5.50e-01 88.1% 92.5%
3319789 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.66 54.0 5.44e-01 88.1% 89.4%
3727542 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 46.0 4.49e-01 84.5% 67.8%
4024727 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 52.0 4.86e-01 86.9% 83.7%
4283343 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 52.0 5.35e-01 86.9% 96.2%
4943161 4.1.1.95 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.65 53.0 4.51e-01 86.9% 62.3%
4517901 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 54.0 5.18e-01 90.5% 93.7%
3271407 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 54.0 5.43e-01 96.4% 90.6%
3645395 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.64 54.0 5.57e-01 89.3% 100.0%
4069560 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 51.0 5.35e-01 86.9% 96.0%
3339162 4.1.1.330 beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.64 58.0 4.98e-01 98.8% 93.1%
3502085 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 55.0 5.23e-01 96.4% 92.0%
2106291 4.1.1.95 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 0.63 52.0 4.37e-01 86.9% 59.0%
4958339 4.11.1.1 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.63 55.0 5.03e-01 95.2% 74.5%
3416068 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.63 49.0 4.01e-01 84.5% 71.6%
3377696 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.62 45.0 3.42e-01 76.2% 39.0%
3487003 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 51.0 4.30e-01 86.9% 59.3%
5034832 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 46.0 4.95e-01 79.8% 100.0%
3719860 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 54.0 4.83e-01 97.6% 75.7%
4620685 4113.1.1.1 beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.60 52.0 4.08e-01 96.4% 86.1%
5063188 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.59 43.0 3.16e-01 76.2% 38.6%
3520312 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 49.0 4.97e-01 100.0% 91.8%
3893808 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.58 53.0 3.53e-01 100.0% 31.2%
5011628 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.58 46.0 3.95e-01 84.5% 86.9%
4927277 2005.1.1.17 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.58 45.0 3.15e-01 86.9% 39.0%
2137682 1.1.5.32 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZNR 0.58 44.0 4.14e-01 81.0% 93.1%
4930890 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 41.0 4.28e-01 86.9% 84.0%
3797511 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 49.0 4.71e-01 96.4% 83.2%
3638174 4.1.1.320 beta barrels › SH3 › SH3 › SH3 › SH3_CYT4 0.56 49.0 4.67e-01 92.9% 100.0%
3576219 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.56 50.0 4.20e-01 100.0% 62.1%
3967745 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.54 43.0 4.55e-01 85.7% 100.0%
4986992 2005.1.1.17 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.54 42.0 2.62e-01 84.5% 17.5%
2325452 10.1.1.11 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 0.51 43.0 3.25e-01 100.0% 63.8%
3238553 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.50 40.0 3.15e-01 88.1% 54.6%
4963369 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.50 42.0 3.33e-01 91.7% 98.2%
3387861 5090.1.1.0 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.50 38.0 3.42e-01 81.0% 96.5%