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MN234178.1__QFG09625.1__PBI_TRIPLEJ_81__00081
Bact-VirMN234178.1__QFG09625.1__PBI_TRIPLEJ_81__00081
Identity
- Accession:
- MN234178 ↗
- Kingdom:
- phage
Quality
87.0
mean pLDDT
Taxonomy
TaxID: 2599838
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-74
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6kjcA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 47.0 | 2.93e-01 | 97.1% | 87.4% |
D2
medium
residues 82-162
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vx7301 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.90 | 56.0 | 5.85e-01 | 100.0% | 68.9% |
| 1auwA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.72 | 58.0 | 4.16e-01 | 100.0% | 30.7% |
| 4hasA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.68 | 32.0 | 2.98e-01 | 75.3% | 35.6% |
| 1tj7A02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.63 | 57.0 | 3.89e-01 | 100.0% | 38.7% |
| 1yf2A02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.62 | 58.0 | 5.20e-01 | 100.0% | 83.2% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 58.0 | 5.16e-01 | 100.0% | 95.4% |
| 2zw3A00 | 1.20.1440.80 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Gap junction channel protein cysteine-rich domain | 0.62 | 57.0 | 4.18e-01 | 100.0% | 90.0% |
| 2i06A01 | 3.50.14.10 | Alpha Beta › 3-Layer(bba) Sandwich › Replication Terminator Protein (Tus); Chain A, domain 1 › Replication terminator Tus, domain 1 superfamily/Replication terminator Tus | 0.59 | 53.0 | 3.88e-01 | 100.0% | 59.3% |
| 1fxkC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 52.0 | 4.43e-01 | 100.0% | 74.4% |
| 6fgcA02 | 3.90.105.10 | Alpha Beta › Alpha-Beta Complex › Molybdopterin biosynthesis moea protein, domain 2 › Molybdopterin biosynthesis moea protein, domain 2 | 0.57 | 25.0 | 2.94e-01 | 86.4% | 51.7% |
| 1qazA00 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.56 | 41.0 | 2.74e-01 | 95.1% | 17.9% |
| 4fmrA02 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.56 | 28.0 | 2.80e-01 | 80.2% | 42.0% |
| 7dl8C01 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.55 | 30.0 | 2.93e-01 | 97.5% | 49.4% |
| 3viqA00 | 6.10.140.1020 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 42.0 | 3.82e-01 | 90.1% | 69.7% |
| 3kbrA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 32.0 | 2.66e-01 | 97.5% | 35.0% |
| 4o4bB00 | 3.30.470.160 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Inositol polyphosphate kinase | 0.53 | 47.0 | 3.33e-01 | 100.0% | 37.2% |
| 4d8mA01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.53 | 45.0 | 3.36e-01 | 98.8% | 36.1% |
| 1ft9A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 41.0 | 3.51e-01 | 90.1% | 53.4% |
| 3up9A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 27.0 | 2.29e-01 | 76.5% | 27.5% |
| 3bwnD01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 39.0 | 3.18e-01 | 80.2% | 61.8% |
| 3tgxB00 | 1.20.1250.70 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21 | 0.50 | 43.0 | 3.87e-01 | 96.3% | 69.6% |
| 2qksA01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 45.0 | 4.11e-01 | 100.0% | 93.4% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3972174 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.80 | 64.0 | 4.77e-01 | 100.0% | 38.3% |
| 4567966 | 109.4.1.2402 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27584, PF27595, PF27648, PF30849 | 0.70 | 56.0 | 3.14e-01 | 100.0% | 7.2% |
| 3783976 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.69 | 52.0 | 5.05e-01 | 100.0% | 71.1% |
| 4941487 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.67 | 37.0 | 3.21e-01 | 71.6% | 37.5% |
| 3595104 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.67 | 60.0 | 3.83e-01 | 100.0% | 22.3% |
| 4981980 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.65 | 62.0 | 5.36e-01 | 100.0% | 91.3% |
| 3929069 | 5050.1.1.31 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › SLC52_ribofla_tr | 0.64 | 56.0 | 4.11e-01 | 97.5% | 64.5% |
| 5062471 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.64 | 61.0 | 5.37e-01 | 100.0% | 95.5% |
| 3213413 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.64 | 54.0 | 3.61e-01 | 100.0% | 46.1% |
| 3485296 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.63 | 56.0 | 5.05e-01 | 100.0% | 72.4% |
| 4972215 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.63 | 58.0 | 4.23e-01 | 100.0% | 89.5% |
| 3923557 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.63 | 59.0 | 4.28e-01 | 100.0% | 72.5% |
| 3728368 | 633.26.1.0 ↗ | alpha bundles › Bromodomain-like › SidC lipid-binding domain › SidC lipid-binding domain | 0.62 | 53.0 | 4.06e-01 | 100.0% | 41.7% |
| 4457710 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.62 | 59.0 | 5.06e-01 | 100.0% | 75.8% |
| 4291442 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.62 | 59.0 | 4.06e-01 | 100.0% | 33.8% |
| 4964968 | 192.2.1.88 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › NFACT_N | 0.62 | 57.0 | 4.50e-01 | 100.0% | 96.2% |
| 4368133 | 5086.1.1.172 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › UCH_C | 0.62 | 59.0 | 4.93e-01 | 100.0% | 64.8% |
| 4416711 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.62 | 58.0 | 3.66e-01 | 100.0% | 22.2% |
| 3401562 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.61 | 56.0 | 5.40e-01 | 98.8% | 97.8% |
| 4626792 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.61 | 56.0 | 4.56e-01 | 100.0% | 69.0% |
| 3271192 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.60 | 53.0 | 3.44e-01 | 100.0% | 96.8% |
| 3710532 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.60 | 56.0 | 5.08e-01 | 100.0% | 83.8% |
| 4942428 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.60 | 55.0 | 4.57e-01 | 100.0% | 74.1% |
| 3691054 | 246.2.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases | 0.59 | 52.0 | 3.28e-01 | 100.0% | 97.0% |
| 3878495 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.59 | 53.0 | 3.86e-01 | 98.8% | 93.5% |
| 3775175 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.59 | 53.0 | 4.95e-01 | 100.0% | 81.0% |
| 3409717 | 633.33.1.1 ↗ | alpha bundles › Bromodomain-like › Rogdi › Rogdi › Rogdi_lz | 0.59 | 55.0 | 3.77e-01 | 100.0% | 42.8% |
| 3656655 | 633.21.1.18 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CASP_dom | 0.57 | 50.0 | 3.94e-01 | 100.0% | 100.0% |
| 5083210 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.56 | 49.0 | 4.48e-01 | 100.0% | 72.7% |
| 4026658 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.56 | 50.0 | 4.38e-01 | 100.0% | 67.5% |
| 3227090 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.56 | 47.0 | 3.76e-01 | 97.5% | 98.9% |
| 3711985 | 3883.1.1.1 ↗ | alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf | 0.55 | 46.0 | 3.29e-01 | 92.6% | 49.6% |
| 3791945 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.55 | 46.0 | 3.40e-01 | 93.8% | 66.2% |
| 3605252 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.55 | 48.0 | 3.87e-01 | 100.0% | 51.5% |
| 4940192 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.54 | 47.0 | 4.30e-01 | 100.0% | 71.1% |
| 4386701 | 310.2.1.35 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › PF28954 | 0.53 | 46.0 | 3.85e-01 | 100.0% | 55.9% |
| 3404903 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.52 | 45.0 | 3.44e-01 | 100.0% | 51.8% |
| 3798829 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 44.0 | 3.29e-01 | 100.0% | 39.1% |
D3
medium
residues 165-213
Domain cluster:
representative