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MN234184.1__QFG10032.1__SEA_IDENTITYCRISIS_12__00012

Bact-Vir

MN234184.1__QFG10032.1__SEA_IDENTITYCRISIS_12__00012

Identity

Accession:
MN234184 ↗
Kingdom:
phage

Quality

92.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-182
PDB
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hkhA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.70 55.0 5.85e-01 99.4% 92.6%
4divV01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.69 51.0 5.64e-01 97.7% 94.9%
2q9kA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.66 40.0 4.32e-01 100.0% 68.7%
4rt0A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.66 36.0 4.39e-01 98.8% 81.7%
1lp9E02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 27.0 3.70e-01 73.3% 88.7%
3w57A00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.52 27.0 3.29e-01 98.3% 75.7%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4514734 1.1.13.42 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Tail_tube 0.78 50.0 6.10e-01 97.7% 100.0%
4929634 1.1.5.47 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.77 55.0 4.63e-01 100.0% 46.3%
4873215 1.1.13.11 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 0.76 57.0 6.27e-01 100.0% 94.3%
5004308 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.76 63.0 6.66e-01 100.0% 96.1%
4888726 1.1.13.6 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.76 61.0 6.24e-01 100.0% 86.6%
3943316 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.75 64.0 6.62e-01 100.0% 95.0%
3964955 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.71 63.0 6.53e-01 98.8% 100.0%
3502370 1.1.5.47 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.71 59.0 6.15e-01 100.0% 94.4%
2471641 1.1.5.24 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.70 54.0 5.75e-01 100.0% 91.3%
2832216 1.1.5.24 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.69 56.0 5.97e-01 99.4% 96.1%
5083300 1.1.13.6 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.68 54.0 5.89e-01 100.0% 98.6%
3942090 1.1.5.77 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube 0.68 57.0 5.83e-01 97.1% 91.5%
2387782 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.66 55.0 5.56e-01 99.4% 88.7%
3943681 1.1.13.47 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like 0.61 50.0 5.32e-01 93.6% 99.3%
3580020 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.60 53.0 5.10e-01 95.3% 82.6%
3285688 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.58 26.0 3.43e-01 98.3% 74.7%
3676918 11.2.1.37 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF6598 0.58 30.0 3.35e-01 99.4% 63.0%
5010248 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.57 24.0 3.28e-01 95.9% 77.5%
3447675 11.2.1.37 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF6598 0.53 29.0 3.46e-01 98.8% 77.4%
3458655 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.53 29.0 3.56e-01 91.9% 83.3%
3460834 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.53 28.0 3.20e-01 91.9% 65.9%
5075687 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.52 24.0 3.15e-01 98.3% 80.0%
1933307 9.13.1.5 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › AOC_like 0.51 24.0 2.79e-01 100.0% 55.3%
D2 high residues 186-266
PDB
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dm2A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 52.0 4.76e-01 100.0% 63.6%
8ezmH02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 56.0 5.06e-01 100.0% 83.9%
5swsE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 56.0 5.07e-01 100.0% 79.3%
6mw4A01 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.63 54.0 4.71e-01 100.0% 72.3%
2j8hA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 49.0 4.67e-01 100.0% 72.2%
2dm7A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 46.0 4.50e-01 100.0% 72.7%
5uv6A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 47.0 4.65e-01 100.0% 78.7%
3iylW05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 53.0 5.08e-01 100.0% 85.4%
2wdoA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.60 44.0 3.92e-01 80.2% 96.7%
1cczA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 52.0 5.02e-01 100.0% 88.2%
3fcgB00 2.60.40.3110 Mainly Beta › Sandwich › Immunoglobulin-like › Outer membrane usher protein 0.58 39.0 4.13e-01 98.8% 78.9%
1n91A00 3.30.1200.10 Alpha Beta › 2-Layer Sandwich › Conserved Hypothetical Protein Mth637; Chain: A; › YggU-like 0.58 46.0 4.26e-01 88.9% 75.0%
5tzmA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 47.0 4.56e-01 100.0% 81.1%
2bhuA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 42.0 3.99e-01 100.0% 66.7%
4mt1A07 3.30.70.1440 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain 0.56 49.0 4.61e-01 100.0% 81.4%
1ms5B02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 47.0 3.39e-01 100.0% 46.8%
5jipA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 45.0 4.42e-01 100.0% 84.4%
3op1A02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.53 38.0 3.44e-01 90.1% 55.9%
4w8jA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 42.0 3.44e-01 100.0% 47.4%
2woyA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 44.0 3.62e-01 100.0% 59.5%
7mjrA04 2.60.40.1790 Mainly Beta › Sandwich › Immunoglobulin-like › Fungal immunomodulatory protein Fve 0.51 42.0 4.06e-01 98.8% 81.5%
4b3fX02 2.40.30.270 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.50 36.0 3.46e-01 91.4% 64.3%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3759359 3019.1.1.0 beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain 0.82 77.0 6.83e-01 100.0% 88.2%
3552079 11.1.1.859 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set, Ig_3 0.68 57.0 4.59e-01 100.0% 48.4%
4615321 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.68 56.0 4.74e-01 100.0% 53.6%
3556650 11.1.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.67 56.0 5.28e-01 100.0% 75.0%
3448756 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.66 54.0 5.25e-01 100.0% 80.0%
3429635 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.66 54.0 5.16e-01 100.0% 75.8%
3576861 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.65 47.0 4.63e-01 100.0% 71.1%
3882496 11.1.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.64 55.0 5.10e-01 100.0% 74.3%
3922657 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.64 54.0 5.18e-01 100.0% 81.1%
3902921 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 57.0 4.06e-01 100.0% 37.1%
3477420 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 56.0 5.10e-01 100.0% 80.0%
4881065 11.1.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.64 55.0 4.86e-01 100.0% 78.2%
3881302 11.1.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.63 55.0 5.05e-01 100.0% 77.3%
3904839 11.1.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.61 53.0 4.94e-01 100.0% 81.9%
1936503 304.109.1.1 a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 0.61 43.0 4.19e-01 87.7% 65.9%
3321331 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.61 53.0 4.74e-01 100.0% 67.8%
4188612 206.1.3.19 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C 0.61 40.0 2.96e-01 93.8% 24.9%
3481359 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 45.0 4.19e-01 100.0% 65.0%
3843023 11.1.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.59 49.0 4.74e-01 93.8% 87.4%
3881566 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 41.0 4.21e-01 100.0% 75.0%
4065160 206.1.3.19 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C 0.59 41.0 3.00e-01 93.8% 26.1%
2582567 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 50.0 4.67e-01 100.0% 81.7%
3910894 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.58 49.0 4.54e-01 100.0% 74.3%
4403433 11.1.1.11 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Usher 0.57 42.0 4.43e-01 100.0% 90.0%
3409742 391.1.2.3 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › SVWC 0.56 36.0 3.62e-01 81.5% 63.1%
3389170 391.1.2.3 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › SVWC 0.54 36.0 3.57e-01 81.5% 64.7%
5027295 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 42.0 4.09e-01 100.0% 78.9%
3520985 10.35.1.2 beta sandwiches › jelly-roll › ER-derived vesicles protein Erv41p lumenal domain › ER-derived vesicles protein Erv41p lumenal domain › COPIIcoated_ERV 0.51 45.0 3.42e-01 100.0% 79.5%
3972567 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.51 41.0 4.05e-01 96.3% 81.1%
3695446 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.50 36.0 2.61e-01 75.3% 94.3%
3730611 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.50 36.0 2.75e-01 79.0% 88.5%
3460800 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.50 43.0 3.63e-01 100.0% 72.0%