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MN234184.1__QFG10043.1__SEA_IDENTITYCRISIS_23__00023

Bact-Vir

MN234184.1__QFG10043.1__SEA_IDENTITYCRISIS_23__00023

Identity

Accession:
MN234184 ↗
Kingdom:
phage

Quality

86.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Identitycrisisvirus› Mycobacterium_phage_IdentityCrisis

TaxID: 2599866

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-42
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ijdA02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.68 45.0 4.74e-01 100.0% 87.1%
3clqA02 3.90.1710.10 Alpha Beta › Alpha-Beta Complex › Enterococcus faecalis V583 fold › Enterococcus faecalis V583 domain 0.63 48.0 3.47e-01 100.0% 84.8%
5undA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.63 45.0 4.23e-01 100.0% 61.1%
1pjqA02 3.30.160.110 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain 0.62 46.0 4.70e-01 97.6% 100.0%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.58 48.0 3.69e-01 100.0% 67.9%
6gfaA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 48.0 3.31e-01 100.0% 45.9%
3k85A00 3.30.230.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.55 45.0 2.79e-01 100.0% 24.2%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.55 39.0 3.05e-01 80.5% 65.1%
4y97D00 1.10.3200.20 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › DNA Polymerase alpha, zinc finger 0.55 43.0 2.87e-01 100.0% 21.3%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.55 40.0 2.99e-01 80.5% 50.5%
1m2vB03 2.30.30.380 Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 0.54 38.0 3.44e-01 73.2% 56.5%
2b61A02 1.10.1740.110 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › 0.54 41.0 3.23e-01 90.2% 76.9%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.54 36.0 3.45e-01 97.6% 55.6%
4gniB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 43.0 3.02e-01 100.0% 44.4%
3r4iA02 6.10.140.960 Special › Helix non-globular › Helix Hairpins › 0.52 39.0 3.48e-01 100.0% 56.7%
4bi3A01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.52 35.0 2.88e-01 73.2% 33.0%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.52 39.0 3.39e-01 97.6% 47.5%
1hywA00 3.30.1580.10 Alpha Beta › 2-Layer Sandwich › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W 0.51 35.0 3.24e-01 75.6% 82.8%
2innB00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.50 42.0 2.40e-01 100.0% 28.8%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3827097 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.63 48.0 3.72e-01 92.7% 34.5%
5007460 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.63 46.0 2.82e-01 82.9% 14.6%
3434734 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.62 50.0 3.51e-01 92.7% 29.3%
3989794 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.60 45.0 2.79e-01 87.8% 21.8%
3845449 377.9.1.8 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS 0.60 39.0 3.85e-01 92.7% 60.0%
3995956 376.1.6.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR 0.58 46.0 4.10e-01 95.1% 60.0%
4977598 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.58 42.0 3.15e-01 80.5% 62.7%
3541608 377.1.1.16 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS 0.57 41.0 4.09e-01 100.0% 73.3%
4926891 377.1.1.126 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Arc_trans_TRASH 0.56 39.0 3.89e-01 100.0% 71.1%
3907976 377.9.1.8 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS 0.55 41.0 4.05e-01 100.0% 75.6%
4955873 2485.1.1.147 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DUF2703 0.54 43.0 3.37e-01 100.0% 50.5%
5035093 5051.1.1.3 ↗ alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SSF 0.54 42.0 2.42e-01 92.7% 23.0%
3353021 1.1.11.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › At2g31720-like 0.53 43.0 3.11e-01 100.0% 29.9%
3692316 7579.1.1.9 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Esterase 0.53 42.0 2.51e-01 100.0% 27.3%
5011221 377.1.1.126 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Arc_trans_TRASH 0.51 34.0 3.45e-01 85.4% 72.5%