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MN234186.1__QFG10223.1__PBI_EGAD_81__00081
Bact-VirMN234186.1__QFG10223.1__PBI_EGAD_81__00081
Identity
- Accession:
- MN234186 ↗
- Kingdom:
- phage
Quality
83.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-75
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2znhA03 | 6.20.40.10 | Special › Other non-globular › Porin MspA ribbon fold › | 0.67 | 40.0 | 4.71e-01 | 78.7% | 93.6% |
| 5xyiU00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.64 | 48.0 | 4.41e-01 | 82.7% | 61.9% |
| 6tmfM00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.64 | 49.0 | 4.44e-01 | 82.7% | 63.7% |
| 1vq8R00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.63 | 50.0 | 3.99e-01 | 86.7% | 46.0% |
| 6wubf01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.63 | 41.0 | 3.88e-01 | 85.3% | 54.3% |
| 1vwxP00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.62 | 48.0 | 3.88e-01 | 86.7% | 45.1% |
| 2xzmJ00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.62 | 48.0 | 4.32e-01 | 84.0% | 61.0% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.59 | 49.0 | 4.10e-01 | 94.7% | 85.3% |
| 7oocE01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.58 | 38.0 | 3.69e-01 | 86.7% | 58.8% |
| 8cwoF01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.58 | 38.0 | 3.64e-01 | 85.3% | 56.7% |
| 5x8tT00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.54 | 44.0 | 3.73e-01 | 96.0% | 81.2% |
| 1ksiA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.54 | 40.0 | 2.57e-01 | 81.3% | 38.5% |
| 1cqmA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.54 | 44.0 | 4.03e-01 | 89.3% | 85.7% |
| 1d6uA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.52 | 41.0 | 2.67e-01 | 89.3% | 37.6% |
| 2dixA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 30.0 | 3.04e-01 | 80.0% | 53.8% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4862327 | 304.44.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 | 0.65 | 49.0 | 4.69e-01 | 81.3% | 69.3% |
| 3365211 | 304.39.1.2 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Msl2-3_C | 0.62 | 42.0 | 4.21e-01 | 85.3% | 69.3% |
| 1919434 | 3274.1.1.1 ↗ | extended segments › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › Ribosomal_S5 | 0.61 | 41.0 | 3.98e-01 | 74.7% | 61.6% |
| 3582577 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 40.0 | 3.37e-01 | 86.7% | 39.2% |
| 1420599 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.60 | 43.0 | 3.70e-01 | 74.7% | 66.1% |
| 4220865 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.59 | 41.0 | 3.63e-01 | 73.3% | 71.3% |
| 3239454 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.59 | 41.0 | 3.24e-01 | 72.0% | 50.7% |
| 3716907 | 327.4.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain | 0.58 | 42.0 | 3.90e-01 | 86.7% | 60.0% |
| 4227163 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.58 | 41.0 | 3.77e-01 | 74.7% | 74.0% |
| 4057045 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.58 | 41.0 | 3.59e-01 | 74.7% | 67.0% |
| 3212212 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.56 | 43.0 | 2.82e-01 | 84.0% | 31.3% |
| 4635289 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.55 | 47.0 | 2.99e-01 | 97.3% | 50.0% |
| 3593809 | 304.31.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase | 0.55 | 45.0 | 4.03e-01 | 93.3% | 71.8% |
| 3207693 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.55 | 40.0 | 3.42e-01 | 80.0% | 74.1% |
| 4351239 | 4967.1.1.6 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2 | 0.55 | 34.0 | 2.90e-01 | 78.7% | 35.4% |
| 3802659 | 304.8.1.66 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF7049 | 0.54 | 34.0 | 3.15e-01 | 85.3% | 45.7% |
| 3969252 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.54 | 38.0 | 3.23e-01 | 86.7% | 42.2% |
| 3229293 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.54 | 42.0 | 2.87e-01 | 89.3% | 33.9% |
| 3939681 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.54 | 40.0 | 2.77e-01 | 85.3% | 36.4% |
| 4666185 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.54 | 38.0 | 2.45e-01 | 76.0% | 21.9% |
| 4126255 | 4967.1.1.25 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2+MatK_N | 0.54 | 37.0 | 2.54e-01 | 70.7% | 27.3% |
| 4966859 | 304.51.1.8 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas6b_C | 0.53 | 35.0 | 3.58e-01 | 85.3% | 68.0% |
| 3236666 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.53 | 42.0 | 2.82e-01 | 90.7% | 33.6% |
| 4600281 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.52 | 38.0 | 3.38e-01 | 77.3% | 67.9% |
| 3219752 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.52 | 39.0 | 2.68e-01 | 86.7% | 32.8% |
| 3648114 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.51 | 32.0 | 3.13e-01 | 77.3% | 54.1% |
| 4230774 | 101.1.9.117 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_assoc | 0.51 | 35.0 | 3.34e-01 | 73.3% | 87.4% |
| 3965794 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.51 | 36.0 | 3.40e-01 | 86.7% | 60.0% |
| 4324097 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.51 | 37.0 | 3.38e-01 | 77.3% | 71.0% |
| 3971017 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.51 | 41.0 | 3.66e-01 | 90.7% | 74.5% |
| 3728343 | 4186.1.1.0 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p | 0.51 | 36.0 | 2.99e-01 | 77.3% | 63.4% |
| 4061385 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.51 | 37.0 | 3.34e-01 | 78.7% | 71.4% |
| 3219989 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.50 | 41.0 | 2.80e-01 | 100.0% | 66.9% |