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MN234206.1__QFG12090.1__PBI_RACECAR_37__00037

Bact-Vir

MN234206.1__QFG12090.1__PBI_RACECAR_37__00037

Identity

Accession:
MN234206 ↗
Kingdom:
phage

Quality

76.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Arthrobacter_phage_Racecar

TaxID: 2599831

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-83
PDB
Domain cluster: rep: HM114277.1__AEQ20971.1__E3_0570__00061__D38-99
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4innA00 2.40.128.520 Mainly Beta › Beta Barrel › Lipocalin › 0.61 48.0 3.95e-01 87.2% 85.6%
4q8gA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.60 52.0 3.46e-01 100.0% 31.1%
2mc2A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.60 47.0 3.55e-01 87.2% 100.0%
2o62A02 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 45.0 3.90e-01 92.3% 97.1%
4kh8A01 2.40.128.540 Mainly Beta › Beta Barrel › Lipocalin › Domain of unknown function DUF4822 0.57 47.0 3.78e-01 96.2% 81.9%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.53 44.0 3.33e-01 94.9% 36.2%
1ul7A00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.52 39.0 3.63e-01 80.8% 67.6%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.51 40.0 3.29e-01 87.2% 46.8%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 39.0 3.65e-01 83.3% 85.0%
6ixyA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 38.0 3.30e-01 83.3% 82.4%
1n08A00 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.51 44.0 3.59e-01 100.0% 66.2%
3nutB02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.51 41.0 3.51e-01 100.0% 54.7%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.50 34.0 3.68e-01 94.9% 87.5%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3926817 219.1.1.25 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT 0.63 57.0 4.38e-01 98.7% 55.0%
3638174 4.1.1.320 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_CYT4 0.60 41.0 3.91e-01 92.3% 60.0%
1165706 219.1.1.57 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CIF 0.59 52.0 4.04e-01 100.0% 74.4%
4432457 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.59 46.0 4.87e-01 97.4% 94.3%
3487081 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 45.0 4.14e-01 82.1% 72.0%
5050686 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.59 40.0 3.89e-01 70.5% 71.8%
5038340 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.56 44.0 4.54e-01 92.3% 90.7%
3184235 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.56 48.0 3.99e-01 97.4% 55.2%
3332613 4.1.1.284 ↗ beta barrels › SH3 › SH3 › SH3 › SBNO 0.56 42.0 3.67e-01 87.2% 52.5%
3413777 11.1.1.1372 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › VERL_C 0.55 43.0 3.37e-01 84.6% 95.3%
3575865 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.54 41.0 4.28e-01 89.7% 90.0%
3497365 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.54 37.0 4.17e-01 80.8% 100.0%
3244742 2484.1.1.200 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.54 38.0 2.57e-01 73.1% 19.7%
3486847 4.1.1.284 ↗ beta barrels › SH3 › SH3 › SH3 › SBNO 0.54 42.0 3.89e-01 87.2% 68.6%
3510676 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 39.0 3.73e-01 93.6% 64.2%
3410364 1.1.7.90 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ZNFX1 0.52 44.0 3.99e-01 94.9% 91.8%
3519774 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 40.0 3.66e-01 93.6% 61.9%
3626966 1.1.7.90 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ZNFX1 0.52 44.0 3.93e-01 93.6% 84.5%
3768346 4.1.1.226 ↗ beta barrels › SH3 › SH3 › SH3 › KDM3B_Tudor 0.52 41.0 4.16e-01 94.9% 92.0%
4034320 4.1.1.398 ↗ beta barrels › SH3 › SH3 › SH3 › YolD 0.52 41.0 4.30e-01 94.9% 100.0%
3787323 3343.1.1.2 ↗ alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal,GCP_N_terminal 0.52 39.0 2.39e-01 85.9% 15.6%
5078190 2484.1.1.18 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.52 34.0 2.36e-01 93.6% 19.6%
4017305 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 40.0 2.75e-01 85.9% 77.3%
3668886 4.11.1.2 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.51 43.0 3.70e-01 96.2% 66.2%
3941087 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.51 44.0 3.98e-01 96.2% 94.3%
3594795 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 41.0 3.75e-01 91.0% 98.1%