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MN234206.1__QFG12149.1__PBI_RACECAR_101__00101

Bact-Vir

MN234206.1__QFG12149.1__PBI_RACECAR_101__00101

Identity

Accession:
MN234206 ↗
Kingdom:
phage

Quality

90.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Arthrobacter_phage_Racecar

TaxID: 2599831

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-100
PDB
Domain cluster: rep: KF669650.1__AGY47111.1__CN1A_2__00002__D11-98
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3havA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.69 34.0 3.50e-01 71.7% 47.2%
1kcgC00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.67 46.0 3.71e-01 70.7% 78.8%
6t5kC00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.63 46.0 3.48e-01 76.1% 42.0%
3vsmA03 2.60.40.4340 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 45.0 4.52e-01 75.0% 83.0%
3fruA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.62 43.0 3.44e-01 70.7% 78.5%
1t7vA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.60 43.0 3.46e-01 76.1% 79.8%
2d0bA01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.58 38.0 3.89e-01 92.4% 68.5%
3gjyA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 45.0 3.23e-01 85.9% 63.8%
2jmbA00 2.40.128.290 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein family Atu4866 0.56 34.0 3.68e-01 82.6% 72.2%
3pqhA01 2.20.220.20 Mainly Beta › Single Sheet › Glycosyl hydrolase fold › 0.54 34.0 4.07e-01 93.5% 96.7%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.54 28.0 3.54e-01 77.2% 90.0%
7bwfA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.52 32.0 3.35e-01 71.7% 65.5%
2wm1A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.51 44.0 3.10e-01 100.0% 96.4%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3173084 331.1.1.13 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CPSF73-100_C 0.69 48.0 4.95e-01 85.9% 77.6%
3538099 6129.1.1.1 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.65 51.0 4.06e-01 100.0% 42.2%
5062306 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.63 42.0 4.26e-01 85.9% 70.0%
5075886 243.6.1.1 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.62 43.0 4.85e-01 100.0% 92.9%
3253856 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.60 45.0 4.11e-01 80.4% 64.0%
3929050 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.59 45.0 4.21e-01 84.8% 65.2%
4947558 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.59 41.0 4.15e-01 84.8% 73.3%
5045984 243.6.1.1 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.58 42.0 4.41e-01 76.1% 88.2%
4025709 79.1.1.0 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.58 39.0 4.44e-01 81.5% 96.9%
4030493 331.1.1.5 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N 0.58 40.0 3.85e-01 87.0% 61.9%
3760943 6129.1.1.11 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › ITI_HC_C 0.58 52.0 3.99e-01 100.0% 45.9%
3394354 243.6.1.4 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA 0.58 42.0 4.08e-01 75.0% 82.0%
5073587 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.57 40.0 3.97e-01 84.8% 69.5%
3565627 11.1.1.787 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ITI_HC_C 0.57 52.0 4.04e-01 100.0% 47.7%
4966598 243.6.1.4 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA 0.56 41.0 4.26e-01 76.1% 96.5%
3768259 233.1.1.5 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I_2 0.55 42.0 3.38e-01 80.4% 82.8%
142988 243.6.1.4 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA 0.55 40.0 4.03e-01 75.0% 87.9%
3845022 5.1.11.11 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 0.54 42.0 2.57e-01 83.7% 24.7%
3594793 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 39.0 2.68e-01 76.1% 27.6%
3621137 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 44.0 2.73e-01 90.2% 21.6%
3849061 5.1.5.106 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_EML_2 0.54 42.0 2.97e-01 85.9% 62.6%
4946134 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.53 36.0 4.22e-01 94.6% 100.0%
4928895 79.1.1.0 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.53 42.0 3.01e-01 84.8% 29.9%
3181168 3939.1.1.0 ↗ alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain 0.52 45.0 2.97e-01 97.8% 65.0%
3241772 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 45.0 3.09e-01 98.9% 68.3%
3663455 5.1.3.68 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.52 39.0 2.75e-01 79.3% 39.7%
3602921 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 28.0 3.45e-01 75.0% 85.5%
3437923 12.1.1.87 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › SWIM 0.52 32.0 3.78e-01 97.8% 96.7%
4864839 10.1.1.25 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Toxin_R_bind_N 0.52 42.0 3.32e-01 91.3% 98.1%
3996624 5.1.5.164 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_IFT140_1st, Beta-prop_IFT140_2nd 0.52 38.0 2.50e-01 77.2% 30.1%
3262209 243.6.1.4 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA 0.51 39.0 3.94e-01 100.0% 81.1%
3499785 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 40.0 2.72e-01 88.0% 41.3%
None — 0.51 38.0 2.66e-01 80.4% 29.0%
4891048 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.50 42.0 2.76e-01 95.7% 75.0%
3499683 5.1.5.54 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_NOL10_N 0.50 42.0 2.90e-01 97.8% 78.6%