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MN234206.1__QFG12195.1__PBI_RACECAR_149__00149
Bact-VirMN234206.1__QFG12195.1__PBI_RACECAR_149__00149
Identity
- Accession:
- MN234206 ↗
- Kingdom:
- phage
Quality
60.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 62-140
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hteA01 | 1.20.58.1730 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 55.0 | 4.43e-01 | 73.4% | 40.6% |
| 4nqiD00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.75 | 67.0 | 4.79e-01 | 100.0% | 75.9% |
| 3bvoA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.74 | 48.0 | 4.72e-01 | 77.2% | 61.6% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.73 | 59.0 | 5.78e-01 | 87.3% | 79.3% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.73 | 53.0 | 5.43e-01 | 77.2% | 79.2% |
| 4lwsA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.72 | 64.0 | 5.90e-01 | 97.5% | 85.0% |
| 1wdzA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.71 | 63.0 | 4.47e-01 | 97.5% | 81.8% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.71 | 49.0 | 4.88e-01 | 72.2% | 69.5% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 50.0 | 4.68e-01 | 82.3% | 60.2% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.69 | 57.0 | 4.73e-01 | 88.6% | 67.7% |
| 4nooB00 | 1.10.8.1160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.65 | 47.0 | 4.49e-01 | 78.5% | 64.2% |
| 1sg2A00 | 3.30.910.20 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain | 0.64 | 56.0 | 4.66e-01 | 97.5% | 61.0% |
| 3fb2A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 46.0 | 4.22e-01 | 83.5% | 64.8% |
| 1fp1D02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 38.0 | 2.76e-01 | 73.4% | 28.9% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3164951 | 5094.1.1.1 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH | 0.77 | 69.0 | 5.28e-01 | 96.2% | 45.9% |
| 4950585 | 632.8.1.34 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › HisKA | 0.77 | 56.0 | 5.88e-01 | 79.7% | 82.2% |
| 3318812 | 192.8.1.248 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › KIF21A_4th | 0.74 | 59.0 | 4.74e-01 | 87.3% | 44.7% |
| 3861615 | 150.1.1.190 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › SAP130_C | 0.73 | 62.0 | 5.73e-01 | 91.1% | 75.0% |
| 4572974 | 3922.1.1.79 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › SAP130_C | 0.73 | 62.0 | 5.47e-01 | 92.4% | 66.1% |
| 3626992 | 632.8.1.2 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › Alpha-2-MRAP_C | 0.73 | 57.0 | 5.18e-01 | 83.5% | 89.5% |
| 5039649 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.72 | 60.0 | 5.24e-01 | 93.7% | 60.0% |
| 3536875 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.72 | 64.0 | 4.32e-01 | 97.5% | 44.9% |
| 1030831 | 5094.1.1.1 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH | 0.72 | 63.0 | 5.03e-01 | 100.0% | 50.0% |
| 3416168 | 4177.1.1.4 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › IMD | 0.71 | 64.0 | 4.59e-01 | 97.5% | 85.5% |
| 4975860 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.71 | 51.0 | 5.01e-01 | 74.7% | 70.6% |
| 3990466 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.71 | 49.0 | 4.78e-01 | 70.9% | 65.9% |
| 3692897 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.71 | 55.0 | 5.68e-01 | 84.8% | 90.7% |
| 3199608 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.69 | 57.0 | 5.11e-01 | 92.4% | 64.5% |
| 3212246 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.67 | 58.0 | 4.51e-01 | 97.5% | 81.1% |
| 4971143 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.65 | 46.0 | 4.55e-01 | 77.2% | 69.4% |
| 5033256 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.64 | 54.0 | 4.26e-01 | 92.4% | 45.5% |
| 3527434 | 6006.1.1.6 ↗ | extended segments › Voltage gated calcium channel IQ domain › Voltage gated calcium channel IQ domain › Voltage gated calcium channel IQ domain › PF27661 | 0.63 | 52.0 | 4.16e-01 | 91.1% | 60.6% |
| 3739286 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.61 | 54.0 | 3.92e-01 | 100.0% | 77.4% |
| 2770964 | 5073.1.3.0 ↗ | alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Potassium-transporting ATPase subunit KdpB transmembrane domain | 0.58 | 50.0 | 4.38e-01 | 94.9% | 65.3% |
D2
high
residues 142-234
Domain cluster:
rep: OK040794.1__UDL16751.1__SEA_ATUIN_157__00157__D126-229
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8b2gA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.91 | 57.0 | 7.12e-01 | 72.0% | 100.0% |
| 6bioA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.81 | 49.0 | 6.19e-01 | 75.3% | 100.0% |
| 3npfA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.78 | 53.0 | 6.06e-01 | 83.9% | 92.9% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 50.0 | 5.94e-01 | 83.9% | 95.5% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 52.0 | 6.12e-01 | 78.5% | 98.5% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 45.0 | 5.15e-01 | 82.8% | 91.2% |
| 2evrA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 45.0 | 5.00e-01 | 80.6% | 86.5% |
| 2jxbA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 40.0 | 4.22e-01 | 81.7% | 66.3% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 37.0 | 4.35e-01 | 86.0% | 90.3% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 32.0 | 3.65e-01 | 79.6% | 74.6% |
| 2lsmA00 | 3.40.5.70 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › DNA packaging chaperone protein FI, C-terminal beta-strand domain | 0.57 | 32.0 | 3.81e-01 | 79.6% | 82.0% |
| 4amwA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 31.0 | 3.43e-01 | 76.3% | 69.0% |
| 2vgeA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.54 | 44.0 | 3.34e-01 | 84.9% | 49.8% |
| 8jx6A02 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 40.0 | 3.87e-01 | 77.4% | 100.0% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 39.0 | 3.53e-01 | 80.6% | 95.4% |
| 1f5mA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.52 | 44.0 | 3.65e-01 | 97.8% | 86.9% |
| 1txdA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 44.0 | 4.06e-01 | 98.9% | 92.6% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4013287 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.93 | 59.0 | 7.36e-01 | 73.1% | 100.0% |
| 3988893 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.86 | 57.0 | 6.35e-01 | 80.6% | 84.0% |
| 3840076 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.85 | 54.0 | 6.69e-01 | 77.4% | 100.0% |
| 4009391 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 57.0 | 6.09e-01 | 79.6% | 81.2% |
| 3204891 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 64.0 | 7.17e-01 | 80.6% | 100.0% |
| 4550532 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.82 | 54.0 | 5.57e-01 | 79.6% | 70.0% |
| 4031670 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.82 | 52.0 | 6.44e-01 | 77.4% | 100.0% |
| 4358722 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.82 | 55.0 | 5.25e-01 | 81.7% | 61.0% |
| 4196229 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.81 | 55.0 | 6.28e-01 | 82.8% | 91.4% |
| 3289848 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.81 | 62.0 | 6.95e-01 | 79.6% | 100.0% |
| 4038705 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.81 | 53.0 | 6.38e-01 | 80.6% | 96.9% |
| 4602101 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.81 | 53.0 | 6.27e-01 | 80.6% | 95.4% |
| 4127826 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.81 | 53.0 | 6.35e-01 | 79.6% | 96.9% |
| 2410170 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.80 | 53.0 | 6.38e-01 | 82.8% | 100.0% |
| 3978088 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 50.0 | 5.96e-01 | 79.6% | 92.3% |
| 4520767 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.79 | 52.0 | 5.98e-01 | 82.8% | 90.0% |
| 4207556 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.79 | 56.0 | 6.35e-01 | 79.6% | 97.1% |
| 4588126 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 63.0 | 6.49e-01 | 83.9% | 96.6% |
| 4427420 | 4.1.1.436 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29249 | 0.78 | 55.0 | 5.95e-01 | 86.0% | 85.0% |
| 4032300 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.77 | 59.0 | 6.05e-01 | 79.6% | 86.7% |
| 1263580 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.76 | 53.0 | 5.90e-01 | 86.0% | 89.3% |
| 1263586 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 53.0 | 6.01e-01 | 86.0% | 93.1% |
| 4303967 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 64.0 | 6.57e-01 | 89.2% | 100.0% |
| 1673571 | 4.1.1.120 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_16 | 0.75 | 51.0 | 5.57e-01 | 84.9% | 84.2% |
| 4386715 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.75 | 60.0 | 6.25e-01 | 82.8% | 90.6% |
| 1290375 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.75 | 52.0 | 6.08e-01 | 79.6% | 98.5% |
| 3579483 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.74 | 57.0 | 5.95e-01 | 79.6% | 100.0% |
| 3700744 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 56.0 | 5.51e-01 | 79.6% | 96.0% |
| 4650162 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 48.0 | 5.57e-01 | 81.7% | 95.4% |
| 3715828 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.72 | 55.0 | 5.93e-01 | 80.6% | 92.5% |
| 3700747 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 55.0 | 5.66e-01 | 80.6% | 88.9% |
| 3718657 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 46.0 | 5.51e-01 | 77.4% | 96.8% |
| 1905739 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.71 | 58.0 | 6.01e-01 | 84.9% | 91.9% |
| 4291404 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 50.0 | 5.51e-01 | 81.7% | 90.7% |
| 4091791 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 52.0 | 5.76e-01 | 80.6% | 97.3% |
| 4340107 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 52.0 | 5.76e-01 | 92.5% | 98.7% |
| 3707023 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 55.0 | 5.42e-01 | 86.0% | 83.0% |
| 3594081 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 50.0 | 5.38e-01 | 81.7% | 90.0% |
| 4335022 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 44.0 | 4.45e-01 | 80.6% | 70.5% |
| 3213653 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.55 | 42.0 | 4.56e-01 | 80.6% | 95.0% |
| 3798523 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.54 | 43.0 | 4.59e-01 | 84.9% | 97.5% |
| 3572436 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.53 | 44.0 | 4.14e-01 | 88.2% | 84.5% |
| 3842361 | 1.1.5.76 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT | 0.53 | 40.0 | 4.02e-01 | 86.0% | 80.0% |
| 5037274 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 42.0 | 4.04e-01 | 90.3% | 97.3% |
| 4030529 | 2.1.1.107 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP40_S1 | 0.52 | 36.0 | 3.61e-01 | 71.0% | 88.4% |
| 3427044 | 4.1.1.36 ↗ | beta barrels › SH3 › SH3 › SH3 › FeThRed_A | 0.51 | 38.0 | 3.92e-01 | 79.6% | 84.4% |
| 5005697 | 10.34.1.0 ↗ | beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain | 0.51 | 29.0 | 3.43e-01 | 84.9% | 86.7% |
D3
high
residues 277-338