←Back to structures
MN234211.1__QFG12881.1__PBI_MIMI_229__00205
Bact-VirMN234211.1__QFG12881.1__PBI_MIMI_229__00205
Identity
- Accession:
- MN234211 ↗
- Kingdom:
- phage
Quality
69.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 132-235
Domain cluster:
rep: NC_028697.1__YP_009191553.1__AU092_gp46__00046__D5-141
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00877.26 best | NLPC_P60 | 43.9 | 2.80e-11 | 92.3% | 65.7% |
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6biqC01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.89 | 83.0 | 7.84e-01 | 99.0% | 100.0% |
| 3h41A03 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.86 | 80.0 | 7.48e-01 | 100.0% | 97.6% |
| 3gt2A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.85 | 81.0 | 7.32e-01 | 100.0% | 92.6% |
| 4xcmA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.84 | 78.0 | 7.37e-01 | 99.0% | 97.6% |
| 2evrA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.84 | 78.0 | 6.86e-01 | 100.0% | 87.8% |
| 2k1gA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.81 | 76.0 | 7.00e-01 | 100.0% | 93.8% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.61 | 49.0 | 4.61e-01 | 86.5% | 85.6% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.61 | 31.0 | 4.15e-01 | 73.1% | 98.1% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.60 | 28.0 | 3.91e-01 | 94.2% | 97.8% |
| 4fk5A02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.60 | 50.0 | 3.61e-01 | 91.3% | 97.1% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.59 | 31.0 | 4.03e-01 | 97.1% | 96.3% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 34.0 | 4.31e-01 | 99.0% | 100.0% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 35.0 | 4.34e-01 | 99.0% | 96.9% |
| 1wn1A02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.56 | 43.0 | 3.38e-01 | 81.7% | 97.4% |
| 6vlfA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 32.0 | 4.06e-01 | 94.2% | 100.0% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 35.0 | 3.92e-01 | 94.2% | 83.5% |
| 4r60A02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.53 | 42.0 | 3.30e-01 | 85.6% | 99.6% |
| 2m1bA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 34.0 | 3.37e-01 | 87.5% | 58.6% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 37.0 | 4.03e-01 | 84.6% | 93.8% |
| 1chmA02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.53 | 40.0 | 3.13e-01 | 82.7% | 96.7% |
| 3zq7A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 35.0 | 3.60e-01 | 86.5% | 70.3% |
| 1qzyA01 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.52 | 40.0 | 2.99e-01 | 81.7% | 87.3% |
| 5ce6A02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.52 | 38.0 | 2.88e-01 | 100.0% | 30.9% |
| 3tavA00 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.51 | 39.0 | 2.94e-01 | 100.0% | 32.6% |
| 8dc1A01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.50 | 42.0 | 3.21e-01 | 92.3% | 95.3% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2410168 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.89 | 84.0 | 7.68e-01 | 100.0% | 92.4% |
| 3286961 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.87 | 83.0 | 7.27e-01 | 100.0% | 93.8% |
| 3963980 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.87 | 82.0 | 7.26e-01 | 100.0% | 94.4% |
| 182479 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.86 | 82.0 | 6.31e-01 | 100.0% | 61.5% |
| 4373825 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.86 | 81.0 | 7.60e-01 | 100.0% | 94.4% |
| 3268199 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.86 | 81.0 | 7.21e-01 | 100.0% | 94.3% |
| 3517692 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.86 | 81.0 | 7.56e-01 | 100.0% | 93.6% |
| 4078132 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.85 | 80.0 | 7.42e-01 | 100.0% | 96.1% |
| 5063005 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.85 | 80.0 | 7.61e-01 | 100.0% | 99.2% |
| 3979648 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.85 | 80.0 | 7.04e-01 | 100.0% | 86.8% |
| 1489617 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.84 | 78.0 | 7.21e-01 | 99.0% | 92.3% |
| 161350 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.84 | 79.0 | 6.90e-01 | 100.0% | 87.2% |
| 3278116 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.84 | 78.0 | 7.50e-01 | 98.1% | 100.0% |
| 3282002 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.84 | 79.0 | 5.90e-01 | 100.0% | 68.1% |
| 3960144 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.84 | 59.0 | 6.88e-01 | 76.9% | 100.0% |
| 4169712 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.83 | 78.0 | 7.30e-01 | 100.0% | 96.8% |
| 3257922 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.83 | 67.0 | 7.01e-01 | 84.6% | 100.0% |
| 3959495 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.79 | 58.0 | 6.62e-01 | 79.8% | 100.0% |
| 3975571 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.78 | 71.0 | 5.71e-01 | 97.1% | 78.9% |
| 3620094 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 33.0 | 4.27e-01 | 99.0% | 94.5% |
| 4890270 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.62 | 31.0 | 4.07e-01 | 98.1% | 90.7% |
| 3474715 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 34.0 | 4.11e-01 | 97.1% | 84.6% |
| 4978402 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.61 | 53.0 | 4.58e-01 | 98.1% | 95.9% |
| 3668886 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.60 | 47.0 | 4.35e-01 | 82.7% | 86.9% |
| 3795121 | 4.1.1.110 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 | 0.60 | 33.0 | 3.99e-01 | 74.0% | 84.6% |
| 3389169 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 42.0 | 4.59e-01 | 86.5% | 89.4% |
| 3266698 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.59 | 46.0 | 4.21e-01 | 82.7% | 74.8% |
| 5033689 | 101.1.2.368 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_36 | 0.57 | 34.0 | 4.15e-01 | 86.5% | 100.0% |
| 3547084 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 38.0 | 4.04e-01 | 81.7% | 78.9% |
| 3407849 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 40.0 | 4.37e-01 | 87.5% | 90.6% |
| 3907619 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 39.0 | 4.19e-01 | 84.6% | 87.1% |
| 3617111 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 40.0 | 4.28e-01 | 89.4% | 86.7% |
| 3407089 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 37.0 | 4.13e-01 | 81.7% | 87.5% |
| 3391558 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 36.0 | 4.03e-01 | 83.7% | 85.0% |
| 3408327 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.55 | 40.0 | 4.23e-01 | 89.4% | 86.7% |
| 4147056 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.54 | 43.0 | 4.39e-01 | 100.0% | 89.0% |
| 3562168 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.54 | 38.0 | 4.05e-01 | 88.5% | 84.4% |
| 3261235 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.54 | 38.0 | 4.15e-01 | 77.9% | 90.6% |
| 3230083 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.54 | 38.0 | 4.05e-01 | 86.5% | 85.6% |
| 3576438 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 37.0 | 3.98e-01 | 86.5% | 87.8% |
| 5081248 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.52 | 46.0 | 4.09e-01 | 100.0% | 90.0% |
| 3608210 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 41.0 | 2.80e-01 | 88.5% | 73.2% |
| 3574238 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 39.0 | 3.99e-01 | 96.2% | 86.0% |
| 3508415 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.50 | 42.0 | 3.97e-01 | 100.0% | 75.4% |