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MN234211.1__QFG12885.1__PBI_MIMI_234__00209
Bact-VirMN234211.1__QFG12885.1__PBI_MIMI_234__00209
Identity
- Accession:
- MN234211 ↗
- Kingdom:
- phage
Quality
65.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 51-120
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5tuuA00 | 1.20.140.80 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Transcription factor DP | 0.81 | 64.0 | 4.91e-01 | 82.9% | 73.6% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.76 | 51.0 | 3.44e-01 | 70.0% | 20.5% |
| 1a49A01 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.75 | 52.0 | 3.81e-01 | 71.4% | 29.5% |
| 2ea9A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.74 | 54.0 | 4.88e-01 | 81.4% | 57.4% |
| 1q9jB02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.69 | 49.0 | 3.53e-01 | 75.7% | 28.0% |
| 6wo0A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.66 | 46.0 | 3.26e-01 | 72.9% | 49.3% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 56.0 | 4.83e-01 | 91.4% | 78.3% |
| 2pn2A00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.66 | 52.0 | 4.16e-01 | 85.7% | 73.7% |
| 2r41A00 | 3.10.450.150 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein | 0.65 | 46.0 | 4.10e-01 | 75.7% | 74.8% |
| 2zdiC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 54.0 | 4.17e-01 | 90.0% | 80.4% |
| 4ebjA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.65 | 50.0 | 4.16e-01 | 85.7% | 89.1% |
| 3aonA00 | 1.10.287.3240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.64 | 51.0 | 3.78e-01 | 88.6% | 59.0% |
| 2c7yA00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.62 | 45.0 | 2.82e-01 | 75.7% | 48.3% |
| 3kzwA01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.61 | 44.0 | 3.38e-01 | 77.1% | 37.3% |
| 5bqpD00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 39.0 | 2.92e-01 | 74.3% | 26.7% |
| 3bzwF00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.59 | 41.0 | 2.84e-01 | 72.9% | 44.4% |
| 6l3tA01 | 1.20.1440.80 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Gap junction channel protein cysteine-rich domain | 0.58 | 50.0 | 3.54e-01 | 92.9% | 35.7% |
| 4mtnA01 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.58 | 37.0 | 3.37e-01 | 75.7% | 47.4% |
| 3mk7C01 | 6.10.280.130 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 46.0 | 4.16e-01 | 85.7% | 71.3% |
| 3hm2A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 40.0 | 3.09e-01 | 75.7% | 100.0% |
| 3ks7A02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 38.0 | 2.89e-01 | 87.1% | 26.8% |
| 5cm2Z00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 39.0 | 2.92e-01 | 72.9% | 50.5% |
| 1k8kA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.56 | 39.0 | 3.67e-01 | 75.7% | 67.4% |
| 2l97A01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.56 | 39.0 | 3.53e-01 | 74.3% | 57.6% |
| 3aa0B01 | 1.20.58.570 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › F-actin capping protein, alpha/beta subunit, N-terminal domain | 0.55 | 35.0 | 3.29e-01 | 70.0% | 52.3% |
| 1uw4A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 35.0 | 3.29e-01 | 80.0% | 53.8% |
| 3qvnA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.51 | 39.0 | 3.38e-01 | 84.3% | 70.1% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 34.0 | 3.16e-01 | 71.4% | 93.9% |
| 4c2dA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 34.0 | 3.18e-01 | 70.0% | 60.2% |
| 3ak5D02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.50 | 43.0 | 2.51e-01 | 100.0% | 47.0% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3293552 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.80 | 54.0 | 4.08e-01 | 71.4% | 31.4% |
| 3630392 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.77 | 53.0 | 4.20e-01 | 70.0% | 38.3% |
| 3959362 | 101.1.1.531 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › WS_DGAT_cat | 0.76 | 53.0 | 4.05e-01 | 72.9% | 41.3% |
| 3918382 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.75 | 56.0 | 3.30e-01 | 88.6% | 10.0% |
| 3600856 | 7518.1.1.0 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like | 0.75 | 50.0 | 4.04e-01 | 70.0% | 36.6% |
| 3624229 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.72 | 57.0 | 3.72e-01 | 90.0% | 20.7% |
| 4283560 | 3346.1.1.5 ↗ | a+b two layers › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › ODR4-like | 0.71 | 55.0 | 3.96e-01 | 82.9% | 64.5% |
| 5037750 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.71 | 58.0 | 4.16e-01 | 88.6% | 53.3% |
| 5048993 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.69 | 52.0 | 4.26e-01 | 81.4% | 46.2% |
| 4978893 | 3755.3.1.632 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Prefoldin | 0.68 | 60.0 | 4.65e-01 | 92.9% | 67.1% |
| 5056727 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.68 | 56.0 | 3.96e-01 | 88.6% | 53.2% |
| 4574817 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 59.0 | 3.92e-01 | 92.9% | 39.2% |
| 3575976 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.68 | 63.0 | 4.87e-01 | 100.0% | 58.6% |
| 5048161 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.66 | 61.0 | 4.74e-01 | 98.6% | 57.9% |
| 5027304 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.66 | 54.0 | 4.02e-01 | 88.6% | 59.4% |
| 4597941 | 3926.1.1.0 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D | 0.65 | 53.0 | 3.80e-01 | 88.6% | 53.0% |
| 4996628 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.65 | 51.0 | 3.65e-01 | 85.7% | 60.5% |
| 5027984 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.65 | 60.0 | 4.93e-01 | 100.0% | 67.5% |
| 5041611 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.64 | 52.0 | 3.80e-01 | 90.0% | 52.8% |
| 3877742 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.64 | 52.0 | 3.41e-01 | 87.1% | 41.8% |
| 4880421 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.64 | 53.0 | 3.75e-01 | 91.4% | 59.6% |
| 4644531 | 1037.1.1.1 ↗ | alpha bundles › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › LGT | 0.63 | 47.0 | 3.07e-01 | 78.6% | 32.5% |
| 4981316 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.63 | 53.0 | 3.77e-01 | 91.4% | 64.5% |
| 3060306 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.63 | 47.0 | 4.00e-01 | 82.9% | 50.9% |
| 1548765 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.62 | 45.0 | 3.97e-01 | 77.1% | 52.9% |
| 3317524 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.61 | 44.0 | 3.10e-01 | 75.7% | 37.6% |
| 3373362 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 44.0 | 2.54e-01 | 74.3% | 16.3% |
| 3873279 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.61 | 54.0 | 3.53e-01 | 95.7% | 70.7% |
| 3214822 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.61 | 52.0 | 3.36e-01 | 92.9% | 92.1% |
| 5000798 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.60 | 55.0 | 3.98e-01 | 100.0% | 73.0% |
| 1207585 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.59 | 43.0 | 4.13e-01 | 77.1% | 70.4% |
| 3990064 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.58 | 41.0 | 3.05e-01 | 72.9% | 83.8% |
| 3514234 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.57 | 40.0 | 2.88e-01 | 74.3% | 97.2% |
| 4638770 | 601.48.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › vWA2 C-terminal domain › vWA2 C-terminal domain | 0.57 | 43.0 | 3.94e-01 | 80.0% | 82.2% |
| 4516798 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.57 | 49.0 | 3.04e-01 | 100.0% | 52.5% |
| 4493480 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.56 | 39.0 | 3.43e-01 | 72.9% | 63.5% |
| 3922189 | 601.48.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › vWA2 C-terminal domain › vWA2 C-terminal domain | 0.55 | 41.0 | 4.16e-01 | 78.6% | 100.0% |
| 4227163 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.55 | 38.0 | 3.38e-01 | 72.9% | 63.0% |
| 3502586 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.54 | 37.0 | 2.92e-01 | 71.4% | 76.8% |
| 3244484 | 4203.1.1.0 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like | 0.54 | 31.0 | 3.36e-01 | 71.4% | 66.7% |
| 3266721 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 40.0 | 4.14e-01 | 80.0% | 96.9% |
| 3642597 | 109.4.1.498 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4487 | 0.53 | 44.0 | 2.65e-01 | 91.4% | 30.6% |
| 4600281 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.52 | 37.0 | 3.21e-01 | 74.3% | 58.7% |
| 3601918 | 7529.1.1.0 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like | 0.52 | 38.0 | 2.77e-01 | 77.1% | 49.5% |