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MN234216.1__QFG13291.1__SEA_GILGAMESH_99__00099
Bact-VirMN234216.1__QFG13291.1__SEA_GILGAMESH_99__00099
Identity
- Accession:
- MN234216 ↗
- Kingdom:
- phage
Quality
79.6
mean pLDDT
Taxonomy
TaxID: 2599890
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-100
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mhxA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.67 | 28.0 | 3.40e-01 | 71.1% | 56.9% |
| 1k9fA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.66 | 50.0 | 4.63e-01 | 81.4% | 80.8% |
| 3wgtA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 45.0 | 3.57e-01 | 74.2% | 92.4% |
| 2braA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 52.0 | 3.37e-01 | 92.8% | 86.3% |
| 2odfB01 | 3.40.630.40 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn-dependent exopeptidases | 0.61 | 47.0 | 3.53e-01 | 82.5% | 94.1% |
| 4wctA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 45.0 | 3.43e-01 | 79.4% | 89.8% |
| 4p02B02 | 3.30.379.20 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › | 0.60 | 43.0 | 3.97e-01 | 74.2% | 68.0% |
| 1ivyB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 48.0 | 3.21e-01 | 95.9% | 90.9% |
| 4yshA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 41.0 | 3.27e-01 | 79.4% | 92.9% |
| 4x9mA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 39.0 | 3.07e-01 | 73.2% | 87.6% |
| 2x5rA01 | 3.30.470.40 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › | 0.56 | 40.0 | 3.79e-01 | 74.2% | 93.9% |
| 2p90A01 | 3.40.50.10900 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit | 0.55 | 39.0 | 3.07e-01 | 75.3% | 83.5% |
| 4rslA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 44.0 | 3.46e-01 | 90.7% | 98.7% |
| 3c4nA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 42.0 | 3.27e-01 | 85.6% | 90.2% |
| 3e35A01 | 3.40.50.10900 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit | 0.52 | 37.0 | 2.90e-01 | 75.3% | 80.4% |
| 3ozoA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.52 | 46.0 | 3.75e-01 | 97.9% | 90.8% |
| 1kkmB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 40.0 | 3.39e-01 | 88.7% | 84.2% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3286933 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.78 | 70.0 | 6.23e-01 | 100.0% | 70.9% |
| 3291444 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.78 | 71.0 | 6.10e-01 | 100.0% | 82.7% |
| 3589463 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.74 | 56.0 | 4.71e-01 | 79.4% | 49.0% |
| 4961903 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.73 | 55.0 | 4.81e-01 | 80.4% | 54.3% |
| 3644314 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.72 | 54.0 | 4.84e-01 | 79.4% | 66.7% |
| 5083216 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.70 | 61.0 | 4.99e-01 | 99.0% | 51.7% |
| 3574082 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.67 | 49.0 | 5.13e-01 | 77.3% | 88.9% |
| 4027213 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.67 | 48.0 | 4.25e-01 | 74.2% | 63.7% |
| 4278662 | 2498.4.1.0 ↗ | mixed a+b and a/b › Zincin-like › HSP90 C-terminal domain (C-terminal part of Pfam 00183) › HSP90 C-terminal domain (C-terminal part of Pfam 00183) | 0.66 | 46.0 | 4.42e-01 | 73.2% | 71.1% |
| 3963949 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.65 | 49.0 | 3.31e-01 | 79.4% | 97.3% |
| 10186 | 2011.1.1.10 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › FGase | 0.62 | 48.0 | 3.56e-01 | 82.5% | 90.9% |
| 3200271 | 2007.2.2.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › PIG-S | 0.61 | 45.0 | 3.76e-01 | 76.3% | 68.5% |
| 4967466 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.60 | 42.0 | 4.18e-01 | 74.2% | 81.9% |
| 3184465 | 261.1.1.0 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain | 0.59 | 47.0 | 3.98e-01 | 84.5% | 88.1% |
| 3612571 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.59 | 48.0 | 3.06e-01 | 86.6% | 48.1% |
| 3705157 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.59 | 46.0 | 3.45e-01 | 84.5% | 67.8% |
| 3686613 | 261.1.1.0 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain | 0.59 | 46.0 | 3.99e-01 | 84.5% | 86.0% |
| 3839968 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.58 | 42.0 | 3.33e-01 | 75.3% | 52.2% |
| 5065003 | 2004.1.2.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › PEP carboxykinase catalytic C-terminal domain | 0.57 | 45.0 | 3.52e-01 | 85.6% | 93.8% |
| 4968812 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.56 | 40.0 | 2.77e-01 | 77.3% | 75.7% |
| 3219594 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 41.0 | 3.68e-01 | 82.5% | 53.8% |
| 44312 | 4334.1.1.1 ↗ | beta complex topology › Inserted beta sandwich domain in Dac-like proteins › Inserted beta sandwich domain in Dac-like proteins › Inserted beta sandwich domain in Dac-like proteins › Peptidase_S13 | 0.55 | 37.0 | 4.09e-01 | 80.4% | 88.2% |
| 5068841 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.55 | 39.0 | 3.00e-01 | 75.3% | 76.6% |
| 4366304 | 2004.1.2.3 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › PEP carboxykinase catalytic C-terminal domain › Hpr_kinase_C | 0.53 | 41.0 | 3.53e-01 | 81.4% | 91.0% |
| 3690642 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.53 | 44.0 | 3.04e-01 | 94.8% | 81.8% |
| 5013646 | 2004.1.1.67 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA | 0.53 | 44.0 | 3.33e-01 | 93.8% | 99.6% |
| 4369610 | 2498.2.1.4 ↗ | mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glycohydro_20b2 | 0.52 | 45.0 | 3.82e-01 | 93.8% | 87.0% |
| 3337596 | 2004.1.1.150 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DRMBL | 0.51 | 38.0 | 3.38e-01 | 79.4% | 91.7% |
| 4296144 | 2004.1.2.3 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › PEP carboxykinase catalytic C-terminal domain › Hpr_kinase_C | 0.51 | 40.0 | 3.47e-01 | 85.6% | 91.9% |
| 3431621 | 2498.2.1.4 ↗ | mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glycohydro_20b2 | 0.50 | 44.0 | 3.79e-01 | 96.9% | 94.2% |
| 3470470 | 2004.1.1.171 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Smg8_Smg9 | 0.50 | 39.0 | 2.88e-01 | 86.6% | 84.3% |