←Back to structures
MN234226.1__QFG14141.1__PBI_CURIOSIUM_98__00097
Bact-VirMN234226.1__QFG14141.1__PBI_CURIOSIUM_98__00097
Identity
- Accession:
- MN234226 ↗
- Kingdom:
- phage
Quality
78.5
mean pLDDT
Taxonomy
TaxID: 2599859
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-66
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2z4hA02 | 2.40.50.540 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NlpE, C-terminal domain | 0.68 | 38.0 | 3.42e-01 | 100.0% | 38.4% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 42.0 | 3.82e-01 | 100.0% | 48.2% |
| 4pkcC00 | 6.20.90.20 | Special › Other non-globular › SH3 type barrels. › Benzylsuccinate synthase gamma subunit | 0.66 | 41.0 | 4.69e-01 | 88.9% | 97.6% |
| 1xjvA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 47.0 | 3.63e-01 | 87.3% | 74.5% |
| 2p5zX02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.59 | 41.0 | 3.58e-01 | 73.0% | 81.4% |
| 2lmcB00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.59 | 36.0 | 3.64e-01 | 98.4% | 60.7% |
| 4uy8X00 | 2.30.170.40 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 | 0.58 | 41.0 | 3.95e-01 | 77.8% | 77.9% |
| 3kvpA00 | 6.20.140.10 | Special › Other non-globular › Immunoglobulin-like › | 0.57 | 29.0 | 3.38e-01 | 85.7% | 65.1% |
| 1vwxT01 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.57 | 35.0 | 3.12e-01 | 93.7% | 39.2% |
| 2qkdA03 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.56 | 33.0 | 3.52e-01 | 85.7% | 68.6% |
| 2wzpR02 | 3.55.50.50 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Phage tail base-plate attachment protein, domain D4 | 0.56 | 41.0 | 3.68e-01 | 84.1% | 100.0% |
| 2y8tA03 | 2.10.70.70 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.54 | 31.0 | 3.30e-01 | 88.9% | 58.2% |
| 2aw4Z00 | 4.10.830.30 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S14; Chain N › Ribosomal protein L31 | 0.53 | 37.0 | 3.65e-01 | 76.2% | 81.4% |
| 4ntqA00 | 3.10.380.20 | Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Novel toxin 21 (CdiA), C-terminal domain | 0.53 | 30.0 | 2.91e-01 | 90.5% | 43.4% |
| 3ue3A01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.53 | 31.0 | 2.66e-01 | 85.7% | 37.1% |
| 1neiA00 | 3.30.160.220 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YoaG | 0.52 | 30.0 | 3.12e-01 | 85.7% | 58.3% |
| 3d8dA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 41.0 | 3.38e-01 | 98.4% | 76.3% |
| 3pnrA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.50 | 38.0 | 2.62e-01 | 84.1% | 82.9% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3784386 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.75 | 48.0 | 5.48e-01 | 74.6% | 91.1% |
| 4457428 | 2.4.1.11 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 | 0.74 | 44.0 | 3.67e-01 | 100.0% | 34.5% |
| 3171604 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.74 | 45.0 | 4.22e-01 | 100.0% | 50.7% |
| 4587696 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.73 | 44.0 | 3.78e-01 | 100.0% | 38.0% |
| 4329624 | 2.4.1.12 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal | 0.72 | 43.0 | 3.65e-01 | 100.0% | 36.2% |
| 3561094 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.71 | 43.0 | 4.09e-01 | 100.0% | 50.7% |
| 3990002 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.71 | 56.0 | 5.16e-01 | 100.0% | 65.9% |
| 3955895 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.70 | 45.0 | 4.74e-01 | 79.4% | 74.5% |
| 4187163 | 2.4.1.12 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal | 0.70 | 42.0 | 3.47e-01 | 100.0% | 33.0% |
| 4515154 | 2.4.1.12 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal | 0.70 | 42.0 | 3.46e-01 | 100.0% | 33.0% |
| 4342292 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.69 | 44.0 | 4.67e-01 | 79.4% | 74.5% |
| 4497599 | 2.4.1.11 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 | 0.68 | 42.0 | 3.53e-01 | 100.0% | 37.1% |
| 3615649 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 42.0 | 4.45e-01 | 100.0% | 70.9% |
| 3481056 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.68 | 32.0 | 4.02e-01 | 71.4% | 89.7% |
| 3650112 | 376.1.3.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-HC5HC2H | 0.66 | 43.0 | 4.17e-01 | 88.9% | 58.6% |
| 4123140 | 2.4.1.12 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal | 0.66 | 40.0 | 3.39e-01 | 100.0% | 35.2% |
| 4096542 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.66 | 42.0 | 4.42e-01 | 79.4% | 74.5% |
| 5045085 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.65 | 50.0 | 4.65e-01 | 100.0% | 66.3% |
| 4323754 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.65 | 41.0 | 4.50e-01 | 79.4% | 85.4% |
| 4421975 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.64 | 41.0 | 4.29e-01 | 79.4% | 74.5% |
| 3250863 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.63 | 50.0 | 4.61e-01 | 100.0% | 67.1% |
| 4120496 | 377.1.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_S26e | 0.61 | 48.0 | 4.56e-01 | 92.1% | 73.3% |
| 4654276 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.60 | 52.0 | 4.42e-01 | 98.4% | 99.0% |
| 4284613 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.60 | 44.0 | 4.15e-01 | 79.4% | 78.2% |
| 5049822 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 41.0 | 4.66e-01 | 77.8% | 100.0% |
| 3615178 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 45.0 | 3.23e-01 | 81.0% | 33.5% |
| 4242930 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.59 | 44.0 | 3.95e-01 | 79.4% | 82.2% |
| 3248699 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.59 | 42.0 | 3.58e-01 | 77.8% | 56.4% |
| 3398152 | 874.1.1.0 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain | 0.58 | 31.0 | 2.19e-01 | 88.9% | 14.6% |
| 3438090 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.58 | 41.0 | 3.02e-01 | 77.8% | 34.1% |
| 3742027 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.57 | 41.0 | 3.25e-01 | 79.4% | 44.1% |
| 3895909 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.57 | 41.0 | 2.70e-01 | 76.2% | 23.2% |
| 4977218 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.57 | 46.0 | 2.92e-01 | 90.5% | 38.0% |
| 3601862 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 44.0 | 2.59e-01 | 82.5% | 16.3% |
| 3649408 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.56 | 41.0 | 3.84e-01 | 79.4% | 78.2% |
| 3253518 | 5.1.4.179 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Vps41 | 0.55 | 40.0 | 2.50e-01 | 77.8% | 23.8% |
| 3632975 | 3447.1.1.1 ↗ | alpha bundles › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › ERG4_ERG24 | 0.55 | 38.0 | 2.58e-01 | 71.4% | 52.4% |
| 4126883 | 2003.1.5.134 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF4470+DUF4471 | 0.55 | 45.0 | 2.83e-01 | 95.2% | 71.2% |
| 3256584 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 33.0 | 3.07e-01 | 87.3% | 52.5% |
| 3500755 | 304.55.1.14 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Y2_Tnp | 0.51 | 45.0 | 3.13e-01 | 100.0% | 70.5% |
| 3958491 | 3513.1.1.4 ↗ | a+b two layers › Putative lipoprotein LppA › Putative lipoprotein LppA › Putative lipoprotein LppA › PF27220 | 0.51 | 35.0 | 2.70e-01 | 71.4% | 80.0% |
| 3575242 | 1.1.1.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 | 0.50 | 41.0 | 3.72e-01 | 88.9% | 96.5% |
| 5048750 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.50 | 38.0 | 2.70e-01 | 100.0% | 24.7% |