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MN241318.1__QEP29519.1__PEf771_103__00104

Bact-Vir

MN241318.1__QEP29519.1__PEf771_103__00104

Identity

Accession:
MN241318 ↗
Kingdom:
phage

Quality

89.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-62
PDB
Domain cluster: representative
CATH (61)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b3qA01 1.10.287.560 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain 0.86 67.0 6.80e-01 91.9% 83.9%
2rdcA00 1.10.287.800 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 0.86 76.0 5.76e-01 100.0% 44.4%
1wdzA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.83 72.0 4.77e-01 100.0% 25.5%
3okqA00 1.20.58.1540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain 0.83 75.0 5.89e-01 100.0% 52.0%
3favD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.82 74.0 6.84e-01 100.0% 78.2%
2rp4A00 6.10.280.60 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain 0.81 59.0 5.64e-01 85.5% 67.6%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.80 66.0 6.45e-01 96.8% 83.6%
1w99A01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.80 71.0 5.11e-01 100.0% 35.3%
3txsC01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.80 68.0 6.41e-01 100.0% 78.7%
3wscA00 1.20.1420.20 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › M75 peptidase, HXXE motif 0.79 72.0 4.65e-01 98.4% 50.6%
1yz5B00 1.20.190.20 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain 0.78 67.0 4.52e-01 96.8% 27.1%
2qywA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.78 66.0 5.75e-01 96.8% 62.1%
4dciA00 6.10.140.1110 Special › Helix non-globular › Helix Hairpins › 0.77 70.0 5.24e-01 100.0% 42.9%
7metA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.77 68.0 4.31e-01 100.0% 21.4%
3lphC00 6.10.140.630 Special › Helix non-globular › Helix Hairpins › 0.77 60.0 6.17e-01 90.3% 89.7%
3pjaJ01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.76 61.0 4.80e-01 96.8% 42.0%
2rd0B00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.76 63.0 4.91e-01 100.0% 41.7%
2r9iA00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.76 60.0 5.76e-01 85.5% 74.6%
4iloA00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.76 66.0 4.46e-01 100.0% 28.8%
1tjlA00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.76 67.0 5.11e-01 100.0% 44.8%
1rq0A01 6.10.140.160 Special › Helix non-globular › Helix Hairpins › 0.76 67.0 6.08e-01 100.0% 74.7%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 64.0 6.15e-01 98.4% 83.6%
2rkhA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.75 62.0 5.88e-01 93.5% 76.3%
1hr5A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.75 53.0 5.86e-01 80.6% 97.9%
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.74 66.0 6.04e-01 100.0% 75.6%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.74 58.0 5.14e-01 93.5% 59.3%
4i0xG00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.74 62.0 6.09e-01 100.0% 88.2%
3fxdB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 54.0 5.57e-01 98.4% 86.2%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.73 61.0 5.27e-01 100.0% 58.8%
2oduA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 63.0 5.34e-01 100.0% 58.1%
4e4eA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.73 60.0 5.78e-01 100.0% 81.7%
1nt2B02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.72 60.0 5.87e-01 91.9% 88.1%
2xubA05 6.10.140.1450 Special › Helix non-globular › Helix Hairpins › 0.72 62.0 5.46e-01 100.0% 80.2%
1br0A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 60.0 4.93e-01 100.0% 50.0%
4wzxA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.71 55.0 5.13e-01 85.5% 68.0%
1ni3A03 1.10.150.300 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Obg-related GTPase Ych/YyaF, coiled-coil domain 0.71 61.0 5.48e-01 100.0% 69.2%
8ctsB01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.71 50.0 4.54e-01 75.8% 83.9%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.71 59.0 5.58e-01 96.8% 77.3%
2bdeA03 1.20.58.1160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 54.0 5.07e-01 100.0% 68.8%
6tkvA01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.70 59.0 5.76e-01 100.0% 88.2%
1wazA00 1.10.287.910 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › bacterial mercury transporter, merf 0.70 49.0 5.43e-01 79.0% 100.0%
4mtxD00 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.70 59.0 5.17e-01 96.8% 81.1%
1pd3A00 1.10.287.230 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.70 52.0 5.45e-01 83.9% 94.4%
4kzsA02 6.10.140.1870 Special › Helix non-globular › Helix Hairpins › 0.69 53.0 5.11e-01 83.9% 74.3%
2cazC00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.68 59.0 5.86e-01 100.0% 96.9%
1z0jB00 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.67 47.0 5.03e-01 79.0% 90.2%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.67 56.0 5.52e-01 98.4% 89.4%
5b1aC01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 54.0 5.30e-01 100.0% 85.3%
2qksA01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 48.0 3.97e-01 77.4% 49.1%
4h63K00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 52.0 4.59e-01 91.9% 61.2%
1yhuB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.65 48.0 3.68e-01 82.3% 34.0%
1lrzA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 49.0 4.94e-01 83.9% 83.9%
4gzrC00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.64 55.0 5.62e-01 100.0% 98.4%
3iqtA01 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.64 47.0 3.98e-01 82.3% 44.7%
2e62A01 6.10.140.420 Special › Helix non-globular › Helix Hairpins › 0.63 48.0 5.16e-01 90.3% 98.1%
2mpkA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.62 47.0 4.48e-01 85.5% 71.6%
1wgwA00 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.61 44.0 3.81e-01 85.5% 48.5%
3r0qA02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.60 50.0 3.46e-01 91.9% 71.6%
3e22A03 1.10.287.600 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.59 43.0 4.54e-01 80.6% 90.7%
4qjfB01 6.10.140.10 Special › Helix non-globular › Helix Hairpins › 0.58 38.0 4.01e-01 82.3% 75.9%
6acsA00 3.40.1180.10 Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like 0.52 41.0 2.87e-01 90.3% 30.7%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3491418 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.86 73.0 6.85e-01 100.0% 77.3%
4992337 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.83 68.0 5.21e-01 100.0% 40.7%
4964878 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.82 69.0 6.66e-01 100.0% 82.9%
3174178 632.22.1.153 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › AIP3 0.80 71.0 5.11e-01 100.0% 37.1%
3222544 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.79 70.0 5.47e-01 100.0% 46.9%
3234964 604.7.1.1 alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA 0.79 71.0 5.81e-01 100.0% 62.7%
3495636 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.79 71.0 4.03e-01 98.4% 13.7%
4038742 150.5.1.53 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PPE 0.78 65.0 5.69e-01 100.0% 61.1%
4024074 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.78 69.0 4.97e-01 100.0% 49.7%
3923922 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.78 56.0 5.29e-01 91.9% 64.0%
3264065 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.77 68.0 6.29e-01 100.0% 82.5%
3737920 1065.1.1.0 alpha bundles › SPX domain › SPX domain › SPX domain 0.77 67.0 4.92e-01 100.0% 36.5%
4030407 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.76 66.0 6.30e-01 100.0% 82.7%
5059555 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.76 67.0 4.12e-01 100.0% 16.8%
3626992 632.8.1.2 alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › Alpha-2-MRAP_C 0.76 66.0 5.56e-01 100.0% 58.1%
3598041 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.75 61.0 5.17e-01 91.9% 53.3%
4099724 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.75 63.0 6.14e-01 95.2% 98.6%
3462297 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 63.0 5.98e-01 100.0% 78.7%
3575794 632.8.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 0.74 64.0 5.11e-01 100.0% 48.8%
4062183 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.74 64.0 6.04e-01 100.0% 81.3%
3253483 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.74 63.0 6.12e-01 96.8% 85.7%
4028496 601.14.1.0 alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin 0.74 66.0 4.40e-01 100.0% 26.4%
3506243 3602.1.1.3 alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Enkurin 0.74 59.0 5.64e-01 91.9% 74.7%
3777742 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.74 65.0 3.95e-01 100.0% 19.2%
3657123 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.74 66.0 5.70e-01 100.0% 65.3%
3915284 192.15.1.0 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.73 61.0 5.22e-01 100.0% 57.1%
4999454 604.10.1.0 alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac 0.72 60.0 5.14e-01 96.8% 56.7%
3902100 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.72 62.0 5.70e-01 100.0% 76.5%
3174647 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.72 62.0 6.02e-01 96.8% 85.7%
3556027 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.72 62.0 5.68e-01 100.0% 76.5%
3487862 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.72 61.0 4.19e-01 100.0% 27.1%
3855461 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.72 62.0 5.67e-01 100.0% 76.5%
3901145 109.4.1.1350 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › STAG, SCD, HEAT_SCC3-SA, PF31007 0.72 62.0 3.39e-01 100.0% 6.3%
3897805 7022.1.1.1 alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT 0.72 62.0 4.57e-01 98.4% 39.4%
1293726 150.7.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PE › PE › PE 0.72 63.0 5.72e-01 100.0% 72.9%
3418094 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.72 53.0 4.91e-01 80.6% 61.3%
3583684 148.1.3.11 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MT 0.71 61.0 4.04e-01 100.0% 23.7%
3171689 603.1.1.105 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF31021 0.71 61.0 4.99e-01 100.0% 52.5%
4353391 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.70 62.0 3.53e-01 96.8% 28.9%
3968516 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.70 60.0 5.70e-01 100.0% 90.7%
3609435 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.70 60.0 5.37e-01 100.0% 81.1%
3633621 192.5.1.16 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › PF26729 0.70 61.0 5.62e-01 98.4% 75.0%
3527000 1021.1.1.0 a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.69 61.0 5.17e-01 98.4% 75.0%
5020529 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.69 58.0 5.62e-01 100.0% 88.6%
3344575 9.26.1.0 beta barrels › Lipocalins/Streptavidin 0.68 57.0 4.11e-01 98.4% 34.9%
3606823 3476.1.1.0 alpha arrays › RecQL4 helicase N-terminal domain › RecQL4 helicase N-terminal domain › RecQL4 helicase N-terminal domain 0.66 52.0 5.29e-01 85.5% 88.3%
4950709 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.66 54.0 5.35e-01 96.8% 93.8%
5002349 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.66 54.0 5.33e-01 91.9% 87.7%
3906467 1008.1.1.106 alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › CSN5_C 0.65 55.0 4.97e-01 100.0% 70.0%
3946071 5059.1.1.7 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › DMT_YdcZ 0.65 50.0 3.93e-01 87.1% 38.8%
3960225 5059.1.1.7 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › DMT_YdcZ 0.63 49.0 4.09e-01 88.7% 47.0%
4010395 622.4.1.26 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › HisKA 0.62 51.0 5.01e-01 98.4% 90.0%
3982421 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.62 51.0 4.88e-01 98.4% 84.0%