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MN270258.1__QGJ85286.1__X__00059

Bact-Vir

MN270258.1__QGJ85286.1__X__00059

Identity

Accession:
MN270258 ↗
Kingdom:
phage

Quality

92.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-128
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dgsA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 32.0 3.57e-01 71.0% 60.3%
2bv4A00 2.60.120.400 Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin 0.62 52.0 4.86e-01 91.4% 92.0%
2v5yA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 43.0 4.28e-01 96.8% 70.1%
3rbyA01 2.40.128.320 Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, N-terminal domain 0.60 53.0 4.54e-01 100.0% 98.0%
3lydA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.59 48.0 4.15e-01 87.1% 77.5%
3djwA00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 43.0 4.29e-01 81.7% 74.7%
4wiwA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.58 41.0 4.69e-01 79.6% 100.0%
1njkA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.58 47.0 4.13e-01 100.0% 60.2%
1vjhA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 43.0 4.02e-01 79.6% 64.2%
2xziA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.57 46.0 3.05e-01 87.1% 96.9%
4k00A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 46.0 4.06e-01 100.0% 59.9%
2wiqA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.56 51.0 3.85e-01 100.0% 47.1%
2c9jA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.56 50.0 3.89e-01 100.0% 50.2%
1i72A00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.56 44.0 3.25e-01 84.9% 71.3%
2c4iA01 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.56 44.0 4.16e-01 88.2% 100.0%
4kh8A01 2.40.128.540 Mainly Beta › Beta Barrel › Lipocalin › Domain of unknown function DUF4822 0.56 47.0 3.96e-01 94.6% 79.5%
2g16B00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.56 50.0 4.17e-01 100.0% 67.5%
3ai4A00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.56 50.0 3.65e-01 100.0% 74.6%
6lofA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.56 50.0 4.17e-01 100.0% 66.7%
8dqwG01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.55 39.0 3.18e-01 72.0% 38.3%
1uisA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.55 49.0 3.76e-01 100.0% 49.1%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 42.0 3.49e-01 80.6% 63.6%
1v8cA02 3.30.1370.80 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain 0.55 38.0 4.06e-01 83.9% 82.5%
1vu2300 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 50.0 4.51e-01 100.0% 74.0%
2pslA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.55 49.0 3.75e-01 100.0% 48.8%
2nujA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 41.0 3.57e-01 100.0% 51.4%
3sq3A01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.54 38.0 3.05e-01 72.0% 70.3%
3r87A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 41.0 3.73e-01 100.0% 58.3%
4gakA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 43.0 3.19e-01 100.0% 32.4%
4dkmA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.54 48.0 3.71e-01 100.0% 52.1%
2q2bA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 42.0 3.67e-01 100.0% 55.3%
3klxB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 44.0 3.56e-01 89.2% 68.0%
2dd7A00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.53 48.0 3.67e-01 100.0% 51.9%
1vloA04 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.53 33.0 3.35e-01 81.7% 62.6%
2o5uA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 41.0 3.58e-01 100.0% 54.2%
2w3xB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 44.0 3.78e-01 100.0% 58.3%
2bi0A02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 41.0 3.60e-01 84.9% 83.7%
2gvhB02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 39.0 3.61e-01 78.5% 85.5%
5ds1A00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 40.0 4.03e-01 91.4% 82.6%
2bi0A01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 40.0 3.42e-01 82.8% 88.2%
4lb0A02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.52 37.0 3.03e-01 74.2% 100.0%
1h4uA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.51 45.0 3.37e-01 100.0% 42.0%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 44.0 3.64e-01 97.8% 74.3%
4ffuB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 40.0 3.46e-01 86.0% 87.3%
6r77A02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.50 36.0 2.95e-01 74.2% 100.0%
1tw0A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 42.0 3.49e-01 89.2% 80.3%
5jmfA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.50 38.0 2.78e-01 80.6% 64.9%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3722829 9.23.1.5 beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › Lipocalin_5 0.64 53.0 4.42e-01 91.4% 93.9%
4015179 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.62 43.0 3.71e-01 90.3% 46.2%
3805924 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.61 51.0 4.11e-01 93.5% 91.4%
3250470 3307.1.1.0 a+b two layers › Domain in small RNA methyltransferase HEN1 › Domain in small RNA methyltransferase HEN1 › Domain in small RNA methyltransferase HEN1 0.60 52.0 5.36e-01 94.6% 98.9%
3788671 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.60 42.0 3.45e-01 72.0% 73.9%
3277097 223.2.1.6 a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN 0.57 45.0 3.81e-01 82.8% 57.4%
3217097 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.57 50.0 4.39e-01 94.6% 70.4%
5039205 222.1.1.8 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_2 0.57 46.0 4.01e-01 100.0% 57.9%
1157836 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.56 51.0 4.28e-01 100.0% 70.5%
224844 222.1.1.8 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_2 0.56 46.0 4.06e-01 100.0% 59.9%
358775 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.56 50.0 4.14e-01 100.0% 66.3%
3773618 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.56 50.0 4.35e-01 97.8% 71.4%
5044924 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.56 41.0 3.93e-01 78.5% 88.2%
5026244 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 34.0 3.52e-01 94.6% 64.4%
3993872 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.55 44.0 3.44e-01 86.0% 50.0%
4970458 222.1.1.8 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_2 0.55 43.0 3.83e-01 100.0% 59.0%
4241432 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.55 43.0 3.89e-01 83.9% 62.4%
4507316 220.1.1.20 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.54 47.0 4.36e-01 100.0% 76.5%
3178344 223.2.1.22 a+b three layers › Profilin-like › profilin-like › profilin-like › Folliculin 0.54 48.0 3.94e-01 98.9% 70.2%
3537249 220.1.1.5 beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.54 48.0 3.78e-01 100.0% 58.5%
3985962 223.1.1.53 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_6 0.54 45.0 3.94e-01 89.2% 71.9%
4608778 1.1.7.107 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 0.54 35.0 3.23e-01 81.7% 50.8%
3449012 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 47.0 4.52e-01 100.0% 85.5%
3612850 222.1.1.4 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.54 41.0 3.42e-01 100.0% 46.1%
4465190 286.1.1.4 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Pro_racemase 0.54 44.0 2.96e-01 87.1% 88.8%
4991711 222.1.1.4 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.54 40.0 3.50e-01 100.0% 50.7%
3782284 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 42.0 3.29e-01 86.0% 44.8%
4029264 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 48.0 4.19e-01 100.0% 72.1%
3966115 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 41.0 3.42e-01 82.8% 81.2%
5018023 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.53 41.0 3.64e-01 82.8% 77.0%
4304407 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.53 46.0 4.11e-01 100.0% 67.4%
None 0.53 41.0 3.59e-01 100.0% 55.7%
4952003 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 44.0 3.84e-01 89.2% 97.0%
3765767 5.1.5.110 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_FAM234A_B 0.52 44.0 2.82e-01 93.5% 98.2%
3728530 222.1.1.4 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.52 43.0 3.67e-01 100.0% 55.3%
4959122 223.1.1.27 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_10 0.52 39.0 3.44e-01 78.5% 76.3%
3940735 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.52 45.0 3.10e-01 98.9% 100.0%
4932133 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.52 40.0 3.77e-01 81.7% 90.0%
3602459 304.25.1.1 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer 0.52 36.0 3.40e-01 77.4% 59.1%
4524276 286.1.1.4 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Pro_racemase 0.51 42.0 2.88e-01 88.2% 90.7%
4025090 304.102.1.1 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 0.51 44.0 3.10e-01 94.6% 53.9%
4527322 223.2.1.18 a+b three layers › Profilin-like › profilin-like › profilin-like › Longin_2 0.51 46.0 3.66e-01 98.9% 57.3%
3248540 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 41.0 3.91e-01 91.4% 73.6%
4056379 223.1.1.130 a+b three layers › Profilin-like › sensor domains › sensor domains › PF26961 0.51 39.0 3.81e-01 80.6% 81.0%
3518300 220.1.1.5 beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.51 44.0 3.91e-01 100.0% 82.6%
4101627 868.1.1.0 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.51 45.0 3.87e-01 95.7% 84.1%
3997015 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.51 41.0 3.66e-01 86.0% 74.6%
5049059 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 45.0 3.95e-01 98.9% 66.7%
3282232 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.50 41.0 3.44e-01 86.0% 73.3%
5039455 223.1.1.27 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_10 0.50 40.0 3.63e-01 83.9% 80.5%
3962753 222.1.1.9 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N 0.50 39.0 3.93e-01 100.0% 81.1%
3792948 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 44.0 4.21e-01 100.0% 91.8%
3894618 223.1.1.78 a+b three layers › Profilin-like › sensor domains › sensor domains › GPR158_179_EC 0.50 45.0 3.47e-01 100.0% 66.2%
4253790 304.102.1.1 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 0.50 43.0 3.25e-01 95.7% 57.1%
3782606 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.50 41.0 3.54e-01 88.2% 71.7%