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MN270266.1__QGJ85871.1__X__00066

Bact-Vir

MN270266.1__QGJ85871.1__X__00066

Identity

Accession:
MN270266 ↗
Kingdom:
phage

Quality

91.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptococcus_phage_phi-SsuFJZZ32_rum

TaxID: 2664396

Cluster

View cluster (138 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-101
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nrwA00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.79 70.0 6.74e-01 94.7% 95.2%
2a3vB01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.75 68.0 6.81e-01 96.8% 97.9%
2khvA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.72 57.0 5.93e-01 86.2% 92.9%
3sqiA01 1.10.150.540 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.70 62.0 6.10e-01 95.7% 97.0%
1tj7A03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.70 42.0 4.72e-01 86.2% 78.9%
2kiwA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.67 51.0 5.31e-01 86.2% 89.5%
2g8lB01 1.10.8.380 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 0.66 41.0 4.75e-01 87.2% 86.6%
3f4mA00 1.20.1440.160 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like 0.63 50.0 4.29e-01 86.2% 78.6%
2ivxB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.63 43.0 4.07e-01 71.3% 93.0%
3dewA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.59 42.0 3.69e-01 73.4% 73.6%
2iw3A02 1.20.1390.20 Mainly Alpha › Up-down Bundle › PWI domain › 0.59 42.0 4.29e-01 86.2% 76.7%
6xy4A01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.59 46.0 4.26e-01 85.1% 70.7%
1zp2A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.59 40.0 3.82e-01 71.3% 89.3%
6zhiB02 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.56 36.0 3.86e-01 81.9% 74.7%
4l3uA00 1.20.1480.40 Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Uncharacterised protein PF16133, DUF4844 0.56 48.0 4.47e-01 97.9% 87.8%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.55 45.0 4.37e-01 89.4% 93.2%
5k3hA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.55 43.0 4.04e-01 87.2% 91.7%
5xs2B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.54 44.0 3.90e-01 86.2% 64.4%
2fp1B00 1.20.59.10 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase 0.54 42.0 3.54e-01 85.1% 93.3%
1c9bA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.53 46.0 4.44e-01 94.7% 99.1%
6ig5A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.53 41.0 3.66e-01 86.2% 57.2%
1tj7A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.53 40.0 3.94e-01 85.1% 73.3%
2khmA01 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.53 40.0 3.87e-01 83.0% 98.1%
1eswA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 41.0 2.60e-01 83.0% 78.4%
6ianC01 1.10.418.70 Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Intraflagellar transport protein 81, N-terminal domain 0.51 36.0 3.38e-01 74.5% 70.8%
4dk4B00 1.10.4010.10 Mainly Alpha › Orthogonal Bundle › all-alpha NTP pyrophosphatase fold › Type II deoxyuridine triphosphatase 0.51 39.0 3.08e-01 84.0% 59.4%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.51 39.0 4.15e-01 85.1% 97.5%
2w02B01 1.10.150.640 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle 0.51 32.0 3.53e-01 81.9% 81.1%
1c9bA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.50 43.0 4.33e-01 96.8% 96.9%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4385779 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.85 80.0 7.26e-01 100.0% 94.2%
4036348 186.1.1.4 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.85 76.0 7.22e-01 95.7% 97.3%
4008705 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.85 80.0 7.38e-01 100.0% 92.2%
3517981 186.1.1.11 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_2 0.85 77.0 7.44e-01 97.9% 97.1%
4487415 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.83 78.0 7.20e-01 100.0% 92.2%
3958903 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.83 73.0 7.06e-01 94.7% 100.0%
4130034 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.82 76.0 7.22e-01 100.0% 96.4%
4069480 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.82 76.0 7.19e-01 100.0% 96.4%
3253222 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.82 77.0 6.87e-01 100.0% 93.6%
4965168 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.82 73.0 6.82e-01 96.8% 97.4%
3504160 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.82 75.0 7.13e-01 100.0% 96.4%
4667626 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.82 72.0 7.10e-01 94.7% 100.0%
4040148 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.81 71.0 6.96e-01 93.6% 100.0%
3969537 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.80 71.0 6.96e-01 94.7% 100.0%
4962931 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.80 73.0 6.85e-01 100.0% 92.2%
5034381 186.1.1.4 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.80 74.0 6.90e-01 100.0% 98.3%
4377812 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.80 70.0 6.87e-01 94.7% 100.0%
4473841 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.79 71.0 6.86e-01 96.8% 97.1%
4051052 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.79 73.0 6.88e-01 100.0% 95.5%
3602667 186.1.1.4 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.78 71.0 6.70e-01 100.0% 99.1%
4964782 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.76 68.0 6.14e-01 100.0% 84.6%
5059724 186.1.1.4 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.75 67.0 6.67e-01 95.7% 100.0%
4997939 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.74 63.0 6.44e-01 90.4% 100.0%
4978391 186.1.1.1 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.73 65.0 6.38e-01 97.9% 100.0%
4980637 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.67 58.0 5.76e-01 97.9% 93.0%
3949071 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 53.0 3.39e-01 86.2% 21.8%
4999627 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.57 40.0 3.59e-01 73.4% 67.4%
5018513 3640.1.1.13 ↗ alpha duplicates or obligate multimers › Minor ampullate fibroin 1 C-terminal domain › Minor ampullate fibroin 1 C-terminal domain › Minor ampullate fibroin 1 C-terminal domain › T1RH-like_C 0.57 45.0 4.48e-01 86.2% 80.0%
3359764 3930.1.1.0 ↗ alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase 0.54 42.0 3.84e-01 86.2% 62.4%
4024559 4970.1.1.2 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A 0.54 39.0 3.19e-01 75.5% 45.5%
5037039 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.53 47.0 4.31e-01 100.0% 80.8%
3488467 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.51 42.0 3.96e-01 94.7% 73.9%
D2 medium residues 106-205
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4acoA02 1.10.443.20 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Centromere DNA-binding protein complex CBF3 subunit, domain 2 0.70 58.0 3.97e-01 89.0% 40.1%
2a3vA02 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.67 61.0 4.75e-01 100.0% 70.6%
1a41A01 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.66 59.0 5.44e-01 98.0% 92.1%
1f44A01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.65 59.0 4.74e-01 100.0% 64.4%
2m38A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 44.0 4.05e-01 81.0% 99.3%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 39.0 4.23e-01 70.0% 95.2%
4qxaB00 2.30.29.230 Mainly Beta › Roll › PH-domain like › 0.55 41.0 3.69e-01 80.0% 99.3%
3voqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 40.0 3.81e-01 75.0% 90.5%
2pt7C01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.55 40.0 3.98e-01 78.0% 77.4%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 45.0 4.30e-01 95.0% 93.4%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 38.0 4.05e-01 75.0% 100.0%
7t8tA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 40.0 3.74e-01 84.0% 99.2%
2lmcB00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 32.0 3.81e-01 75.0% 100.0%
2lg1A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 37.0 3.62e-01 76.0% 93.0%
2cqaA01 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.51 36.0 4.00e-01 96.0% 100.0%
6guuA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 28.0 3.58e-01 82.0% 100.0%
3dghA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 35.0 3.35e-01 74.0% 74.0%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.50 37.0 3.55e-01 80.0% 99.2%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4934137 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.76 61.0 5.27e-01 86.0% 69.7%
4938259 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.73 60.0 5.24e-01 87.0% 86.9%
4940128 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.72 58.0 5.40e-01 86.0% 83.2%
4947463 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.72 59.0 5.85e-01 89.0% 83.8%
5007182 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.72 58.0 4.96e-01 86.0% 62.6%
4930303 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.71 65.0 6.22e-01 100.0% 89.6%
4200953 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.71 65.0 5.57e-01 100.0% 88.4%
2426729 101.1.8.7 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › NDC10_II 0.71 57.0 4.72e-01 87.0% 80.3%
4966027 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.70 65.0 5.20e-01 99.0% 58.2%
3942448 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.70 65.0 5.62e-01 100.0% 100.0%
4940634 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.70 64.0 5.62e-01 99.0% 99.3%
3291526 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.70 64.0 5.28e-01 100.0% 87.4%
5058518 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.70 64.0 5.11e-01 100.0% 56.4%
4966682 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.70 58.0 5.56e-01 90.0% 84.3%
4979786 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.69 63.0 5.88e-01 98.0% 97.5%
3587110 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.69 63.0 5.45e-01 99.0% 88.7%
5061203 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.69 63.0 5.06e-01 100.0% 61.6%
4975028 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.69 63.0 5.91e-01 100.0% 96.7%
3588257 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.68 63.0 5.88e-01 100.0% 91.7%
3964171 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.68 62.0 5.14e-01 100.0% 71.8%
5003452 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.68 61.0 5.59e-01 98.0% 100.0%
4034079 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.68 62.0 5.59e-01 100.0% 93.3%
4253165 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.68 61.0 5.48e-01 100.0% 82.1%
3965072 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.68 62.0 5.66e-01 100.0% 94.6%
4973226 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.68 62.0 5.82e-01 100.0% 86.7%
5054951 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.67 62.0 5.63e-01 100.0% 86.9%
4637388 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.67 61.0 5.11e-01 100.0% 60.0%
4929009 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.67 60.0 5.52e-01 98.0% 88.5%
5072041 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.67 62.0 5.61e-01 100.0% 97.7%
4949702 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.67 61.0 5.74e-01 99.0% 88.3%
4965640 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.67 61.0 4.63e-01 100.0% 74.3%
5028306 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.67 61.0 5.00e-01 100.0% 63.3%
4975762 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.67 60.0 5.58e-01 98.0% 88.0%
184514 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.67 60.0 5.18e-01 100.0% 93.7%
5010452 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.67 61.0 5.92e-01 100.0% 91.8%
4122043 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.66 61.0 5.72e-01 100.0% 90.0%
5016957 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.66 60.0 4.98e-01 100.0% 66.3%
4940211 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.66 59.0 4.90e-01 97.0% 74.7%
4964439 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.66 59.0 4.59e-01 98.0% 66.0%
4954527 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.66 60.0 4.61e-01 100.0% 67.7%
5030401 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.66 60.0 5.41e-01 100.0% 87.4%
4932090 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.66 59.0 5.47e-01 98.0% 100.0%
4428937 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.66 60.0 5.66e-01 100.0% 88.3%
4933965 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.66 60.0 5.56e-01 100.0% 92.0%
2805 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.65 59.0 5.29e-01 100.0% 89.3%
4192665 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.65 58.0 5.45e-01 98.0% 95.0%
5029991 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.65 58.0 5.42e-01 100.0% 85.6%
5083074 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.65 58.0 5.11e-01 100.0% 90.7%
4954640 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.65 58.0 4.65e-01 100.0% 73.7%
4285602 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.65 58.0 5.31e-01 100.0% 95.4%
4961786 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.64 58.0 5.08e-01 100.0% 99.3%
4961917 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.64 58.0 4.71e-01 100.0% 66.3%
4969226 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.62 56.0 5.04e-01 100.0% 98.5%
3369818 325.1.7.3 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.60 34.0 4.01e-01 70.0% 83.1%
3192402 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 43.0 3.76e-01 78.0% 69.2%
3546790 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.57 42.0 3.66e-01 78.0% 96.8%
4928148 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.56 46.0 3.85e-01 87.0% 65.5%
3476015 220.1.1.160 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MADD 0.56 40.0 4.07e-01 73.0% 76.8%
4947833 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 39.0 3.70e-01 73.0% 96.8%
3222570 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 38.0 3.70e-01 71.0% 94.8%
3579987 220.1.1.160 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MADD 0.56 40.0 3.92e-01 75.0% 84.5%
3389668 220.1.1.160 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MADD 0.55 40.0 4.09e-01 79.0% 93.0%
3247407 220.1.1.50 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_17 0.53 42.0 3.91e-01 85.0% 92.0%
3660366 2003.1.2.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › HI0933_like 0.53 39.0 2.79e-01 77.0% 71.0%
3863344 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 41.0 3.83e-01 85.0% 99.2%
4943922 2005.1.1.122 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF_alpha 0.53 38.0 3.02e-01 76.0% 43.8%
5045772 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 41.0 3.99e-01 92.0% 95.7%
D3 medium residues 206-321
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gzrB00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.69 30.0 3.67e-01 97.4% 62.3%
5ekcF01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.66 48.0 3.61e-01 76.7% 78.8%
2hg2A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.65 47.0 3.58e-01 76.7% 80.4%
2i5uA00 1.10.10.630 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DnaD domain-like 0.64 34.0 4.02e-01 72.4% 75.3%
2pmrA00 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.63 29.0 3.55e-01 98.3% 67.1%
1i4dA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.59 29.0 2.50e-01 99.1% 28.2%
2p5tA00 1.10.8.130 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.56 37.0 4.08e-01 74.1% 83.7%
7ocsB01 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.56 39.0 3.45e-01 81.9% 48.0%
8d0vA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.53 44.0 3.16e-01 92.2% 97.7%
1guxB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.53 40.0 3.75e-01 79.3% 78.0%
3t46A00 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.50 30.0 3.51e-01 73.3% 89.3%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4109908 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.76 29.0 3.40e-01 89.7% 48.2%
5071165 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.52 37.0 3.45e-01 74.1% 62.7%
3529790 601.1.1.57 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Talin_VBS2 0.50 39.0 3.83e-01 84.5% 77.7%