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MN270277.1__QGJ86563.1__X__00057
Bact-VirMN270277.1__QGJ86563.1__X__00057
Identity
- Accession:
- MN270277 ↗
- Kingdom:
- phage
Quality
89.4
mean pLDDT
Taxonomy
TaxID: 2664407
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-109
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lydA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.60 | 45.0 | 4.09e-01 | 93.5% | 59.9% |
| 1af6A00 | 2.40.170.10 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type | 0.57 | 51.0 | 3.43e-01 | 99.1% | 36.3% |
| 3r87A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 40.0 | 3.76e-01 | 73.1% | 92.4% |
| 4k00A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 38.0 | 3.57e-01 | 71.3% | 88.3% |
| 1yliB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 38.0 | 3.41e-01 | 70.4% | 81.1% |
| 1bh3A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.55 | 46.0 | 3.41e-01 | 91.7% | 65.4% |
| 4rljB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 38.0 | 3.45e-01 | 73.1% | 91.2% |
| 3f1tB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 40.0 | 3.77e-01 | 82.4% | 86.0% |
| 1lb6A00 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.52 | 47.0 | 4.16e-01 | 99.1% | 96.8% |
| 4iedA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 44.0 | 3.47e-01 | 97.2% | 62.8% |
| 5bkaE01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 40.0 | 3.77e-01 | 83.3% | 91.7% |
| 3jv1A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.51 | 44.0 | 3.70e-01 | 94.4% | 64.3% |
| 1lshA03 | 2.20.50.20 | Mainly Beta › Single Sheet › Outer Surface Protein A; domain 2 › Lipovitellin. Chain A, domain 3 | 0.51 | 37.0 | 3.83e-01 | 80.6% | 83.7% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3228525 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.69 | 54.0 | 5.38e-01 | 100.0% | 80.9% |
| 5079500 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.60 | 42.0 | 3.52e-01 | 72.2% | 52.8% |
| 3508100 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.60 | 54.0 | 4.97e-01 | 100.0% | 77.1% |
| 3447587 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.58 | 51.0 | 3.65e-01 | 96.3% | 42.2% |
| None | — | 0.58 | 51.0 | 3.66e-01 | 97.2% | 43.2% | |
| 3359496 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.57 | 50.0 | 3.75e-01 | 95.4% | 50.9% |
| 3670829 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.57 | 49.0 | 3.50e-01 | 95.4% | 42.7% |
| 3953439 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 33.0 | 3.85e-01 | 70.4% | 85.7% |
| 3615014 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.56 | 47.0 | 4.18e-01 | 89.8% | 66.5% |
| 3719107 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.56 | 44.0 | 2.84e-01 | 83.3% | 43.0% |
| 3969815 | 4210.1.1.5 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › PA4575 | 0.56 | 38.0 | 3.92e-01 | 92.6% | 74.0% |
| 3593521 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.56 | 44.0 | 4.20e-01 | 83.3% | 83.2% |
| 4000243 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.56 | 46.0 | 3.41e-01 | 89.8% | 77.9% |
| 3881564 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.55 | 39.0 | 3.32e-01 | 73.1% | 82.8% |
| 3229481 | 71.1.1.21 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25897 | 0.55 | 38.0 | 3.06e-01 | 89.8% | 35.8% |
| 4991711 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.55 | 39.0 | 3.46e-01 | 73.1% | 96.7% |
| 3813682 | 5.1.3.260 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_2, b-prop_At3g26010-like | 0.55 | 46.0 | 3.33e-01 | 93.5% | 58.7% |
| 3898227 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.54 | 39.0 | 3.40e-01 | 75.0% | 86.1% |
| 3556953 | 109.4.1.1794 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.54 | 43.0 | 2.83e-01 | 90.7% | 20.7% |
| 3429037 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.54 | 47.0 | 3.39e-01 | 96.3% | 41.2% |
| 3506925 | 9.1.1.12 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd | 0.53 | 46.0 | 3.92e-01 | 97.2% | 68.2% |
| 3921650 | 5087.3.1.1 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht | 0.52 | 44.0 | 3.15e-01 | 96.3% | 94.2% |
| 5052595 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 44.0 | 2.93e-01 | 94.4% | 43.7% |
| 3832313 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.51 | 45.0 | 3.22e-01 | 97.2% | 40.3% |
| 4883419 | 5.1.2.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 | 0.50 | 43.0 | 3.14e-01 | 97.2% | 86.9% |
| 4343144 | 5087.3.1.1 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht | 0.50 | 45.0 | 2.83e-01 | 100.0% | 27.1% |
D2
medium
residues 113-199
Domain cluster:
rep: CP063968.1__QPW62289.1__IG390_15050__00016__D508-591