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MN270279.1__QGJ86637.1__X__00016

Bact-Vir

MN270279.1__QGJ86637.1__X__00016

Identity

Accession:
MN270279 ↗
Kingdom:
phage

Quality

87.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-85
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02195.27 best ParB_N 69.7 2.80e-19 98.8% 70.9%
D2 medium residues 86-124_138-185
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17762.9 best HTH_ParB 24.8 2.70e-05 82.8% 60.8%
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mkzN00 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.82 62.0 5.68e-01 81.6% 62.7%
6s6hA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.80 69.0 6.39e-01 97.7% 74.3%
3fflA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.67 48.0 4.24e-01 74.7% 53.2%
2g3kA00 1.20.120.1130 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vps28 C-terminal domain 0.66 46.0 4.57e-01 92.0% 68.1%
3mfnB00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.64 44.0 3.93e-01 72.4% 73.0%
7z7vE01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.64 43.0 4.96e-01 70.1% 100.0%
2j9wB00 1.20.120.1130 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vps28 C-terminal domain 0.62 45.0 4.34e-01 92.0% 67.7%
3vprA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.59 49.0 4.26e-01 94.3% 90.3%
2f07B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.59 50.0 3.95e-01 96.6% 83.2%
3lwjA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.59 49.0 3.86e-01 93.1% 89.6%
2q14B01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.58 41.0 3.02e-01 73.6% 94.4%
4i9cA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 41.0 3.09e-01 75.9% 41.2%
4dloB02 1.25.40.610 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 46.0 4.13e-01 97.7% 65.0%
5h41A01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.56 49.0 3.17e-01 100.0% 51.0%
4yj6A00 3.90.1300.10 Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain 0.56 44.0 2.81e-01 87.4% 59.2%
1q16C01 1.20.950.20 Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C 0.53 45.0 3.52e-01 100.0% 65.9%
2f33A01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 40.0 4.37e-01 92.0% 100.0%
6hftA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 48.0 4.24e-01 100.0% 70.1%
2gs4A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.53 45.0 3.72e-01 94.3% 93.0%
7zmgL01 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 42.0 4.43e-01 95.4% 93.8%
3mnlB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 40.0 3.20e-01 83.9% 67.6%
2di3B02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.52 39.0 3.29e-01 80.5% 98.1%
8b9zK01 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 41.0 4.04e-01 95.4% 80.2%
4w8pA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.51 44.0 3.85e-01 94.3% 64.6%
8e9gK01 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 42.0 4.20e-01 90.8% 85.7%
4epzA00 1.25.40.810 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ 0.50 45.0 3.76e-01 100.0% 57.1%
4hkaA01 1.20.58.480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.50 43.0 2.94e-01 93.1% 83.7%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5073613 3317.1.1.2 alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain › HTH_ParB 0.93 66.0 5.81e-01 79.3% 53.3%
3963064 101.1.1.251 alpha arrays › HTH › HTH › Three-helical HTH › HTH_ParB 0.87 75.0 7.14e-01 95.4% 79.0%
4862437 101.1.1.198 alpha arrays › HTH › HTH › Three-helical HTH › KorB 0.79 57.0 6.44e-01 80.5% 97.1%
4582372 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 56.0 5.45e-01 79.3% 100.0%
3269989 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 44.0 3.26e-01 72.4% 26.0%
5051019 1075.1.1.67 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › 12TM_1 0.63 56.0 4.15e-01 100.0% 76.6%
3289695 191.1.1.54 alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_32 0.63 53.0 4.37e-01 94.3% 80.6%
3388396 101.1.1.485 alpha arrays › HTH › HTH › Three-helical HTH › HTH_22 0.61 43.0 4.79e-01 73.6% 94.1%
4069306 3697.1.1.1 alpha bundles › NQO2 helical bundle domain › NQO2 helical bundle domain › NQO2 helical bundle domain › 2Fe-2S_thioredx 0.59 42.0 4.51e-01 73.6% 91.4%
5029451 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.58 51.0 4.23e-01 96.6% 62.7%
4993305 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.57 49.0 4.35e-01 96.6% 86.2%
3582053 601.1.2.64 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Talin_VBS2 0.55 48.0 4.48e-01 93.1% 78.1%
3318083 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.53 47.0 3.37e-01 100.0% 39.6%
2983202 3843.1.1.1 alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › Oxidored_q2 0.52 41.0 3.97e-01 95.4% 76.0%
3490690 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.52 44.0 3.90e-01 94.3% 64.8%
4190643 109.4.1.356 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.51 45.0 2.93e-01 100.0% 27.7%
4022565 109.4.1.435 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RICTOR_N 0.51 45.0 2.71e-01 96.6% 17.8%
5083422 1075.1.1.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain 0.50 43.0 3.33e-01 100.0% 82.7%
D3 medium residues 186-235
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bnkA00 1.10.8.600 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Phage phi29 replication organiser protein p16.7-like 0.69 57.0 5.39e-01 100.0% 79.7%
2c9oB03 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.67 57.0 4.92e-01 100.0% 71.1%
3uk6A02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.65 56.0 4.81e-01 100.0% 71.1%
3ilkA02 1.10.8.590 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.64 49.0 4.52e-01 86.0% 75.0%
2kjiA00 1.10.100.10 Mainly Alpha › Orthogonal Bundle › Insulin-like, subunit E › Insulin-like 0.63 49.0 4.92e-01 98.0% 92.0%
1wj7A01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.62 47.0 4.58e-01 100.0% 75.0%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 46.0 3.97e-01 84.0% 88.5%
2ejsA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.62 46.0 4.47e-01 96.0% 74.1%
1af7A01 1.10.155.10 Mainly Alpha › Orthogonal Bundle › Chemotaxis Receptor Methyltransferase Cher; domain 1 › Chemotaxis receptor methyltransferase CheR, N-terminal domain 0.61 50.0 4.38e-01 96.0% 87.5%
2da4A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 41.0 3.80e-01 72.0% 66.7%
1b72A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 41.0 3.69e-01 70.0% 55.9%
4ehiA01 3.40.50.1380 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain 0.59 49.0 3.50e-01 100.0% 67.1%
3kbbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 44.0 4.07e-01 96.0% 62.9%
1wh5A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.57 39.0 3.41e-01 72.0% 56.2%
4ou7A00 1.10.8.1180 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.57 46.0 4.26e-01 100.0% 83.1%
2damA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.57 44.0 4.08e-01 100.0% 67.2%
4qgpB00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.56 40.0 3.12e-01 74.0% 66.4%
1qo0D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 43.0 4.53e-01 84.0% 97.8%
6wshA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 43.0 4.22e-01 84.0% 81.8%
3a1sA02 1.10.287.1770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 38.0 3.30e-01 78.0% 72.7%
3a7kB00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.54 44.0 2.89e-01 98.0% 28.7%
3lzhA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.54 46.0 3.15e-01 100.0% 54.8%
2el7A02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.53 41.0 3.52e-01 92.0% 48.9%
3zx4A02 3.30.980.20 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.53 41.0 3.53e-01 90.0% 93.1%
3vwaA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.52 45.0 3.31e-01 100.0% 36.4%
2o5rA04 1.10.8.70 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 0.52 41.0 4.14e-01 98.0% 100.0%
7tfmA01 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.52 44.0 3.33e-01 100.0% 93.3%
2doeA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.52 34.0 3.02e-01 70.0% 44.6%
3tw6A06 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.50 36.0 3.63e-01 98.0% 79.6%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3939049 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.71 61.0 5.81e-01 100.0% 88.3%
4097350 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.68 54.0 5.14e-01 98.0% 76.9%
4930909 101.29.1.0 alpha arrays › HTH › helical bundles in heme iron utilization protein-like › helical bundles in heme iron utilization protein-like 0.68 40.0 3.91e-01 98.0% 54.5%
5009867 601.7.1.2 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN 0.65 46.0 3.53e-01 74.0% 83.6%
3446169 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.63 49.0 4.85e-01 94.0% 90.9%
3239257 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.62 50.0 4.88e-01 100.0% 88.3%
3594325 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.61 48.0 4.88e-01 98.0% 98.0%
160866 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.61 41.0 3.56e-01 72.0% 55.0%
5040543 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.60 47.0 4.66e-01 98.0% 90.9%
3318879 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.60 41.0 3.74e-01 70.0% 64.6%
3778380 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.58 39.0 3.56e-01 74.0% 51.4%
3289310 103.12.1.1 alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR 0.57 41.0 4.02e-01 76.0% 80.0%
3625029 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.56 43.0 3.53e-01 88.0% 57.1%
3969984 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.54 42.0 3.85e-01 88.0% 66.2%
3289319 2003.1.1.67 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_10 0.53 41.0 2.65e-01 90.0% 46.1%
3225765 135.1.1.0 alpha arrays › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain 0.52 41.0 3.12e-01 88.0% 49.6%
3854655 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.51 37.0 3.78e-01 94.0% 78.0%
3300593 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.50 41.0 3.99e-01 96.0% 80.0%