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MN270892.1__QFP94046.1__X__00136
Bact-VirMN270892.1__QFP94046.1__X__00136
Identity
- Accession:
- MN270892 ↗
- Kingdom:
- phage
Quality
85.2
mean pLDDT
Taxonomy
TaxID: 2652429
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-66
Domain cluster:
rep: NC_079184.1__YP_010845028.1__QNH05_gp06__00006__D3-60
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nmlA00 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.79 | 71.0 | 5.89e-01 | 100.0% | 86.0% |
| 6s2wA01 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.79 | 72.0 | 6.34e-01 | 100.0% | 90.2% |
| 7ejoB01 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.78 | 70.0 | 6.20e-01 | 100.0% | 98.8% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.74 | 61.0 | 4.38e-01 | 91.4% | 93.4% |
| 4iajA00 | 3.30.1490.390 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 | 0.68 | 58.0 | 5.41e-01 | 100.0% | 80.3% |
| 1a0iA01 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.68 | 55.0 | 4.93e-01 | 91.4% | 67.5% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.67 | 57.0 | 4.95e-01 | 96.6% | 72.8% |
| 3wcyA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 48.0 | 4.25e-01 | 93.1% | 54.7% |
| 2hpuA01 | 3.30.70.2060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 52.0 | 5.09e-01 | 93.1% | 100.0% |
| 2ed8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 52.0 | 4.64e-01 | 93.1% | 64.0% |
| 2q9kA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 53.0 | 4.09e-01 | 100.0% | 57.8% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.63 | 51.0 | 4.51e-01 | 94.8% | 71.3% |
| 4d7pA00 | 2.60.40.730 | Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain | 0.63 | 51.0 | 4.43e-01 | 93.1% | 63.5% |
| 3s98A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 51.0 | 4.43e-01 | 93.1% | 60.0% |
| 2hn1A01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.63 | 53.0 | 4.00e-01 | 94.8% | 76.8% |
| 4ecnA01 | 2.60.40.3540 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 | 0.62 | 54.0 | 4.55e-01 | 100.0% | 81.6% |
| 4bfkA00 | 2.60.40.730 | Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain | 0.62 | 50.0 | 3.97e-01 | 93.1% | 58.1% |
| 2yweA04 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 49.0 | 3.96e-01 | 87.9% | 98.2% |
| 1y6kR01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 52.0 | 4.45e-01 | 100.0% | 64.7% |
| 4yo1A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 53.0 | 4.65e-01 | 100.0% | 75.3% |
| 4lsdF00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 50.0 | 4.28e-01 | 93.1% | 59.2% |
| 3lqmA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 49.0 | 4.18e-01 | 93.1% | 54.9% |
| 4bwsF00 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.60 | 49.0 | 4.75e-01 | 100.0% | 83.6% |
| 2dm4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 48.0 | 4.22e-01 | 93.1% | 57.4% |
| 5e55B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 48.0 | 4.17e-01 | 93.1% | 64.5% |
| 1cnzA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.58 | 47.0 | 2.96e-01 | 94.8% | 49.3% |
| 1s55A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 41.0 | 3.10e-01 | 77.6% | 62.2% |
| 6uqjA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 40.0 | 2.56e-01 | 75.9% | 40.9% |
| 1ln0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.57 | 40.0 | 3.59e-01 | 77.6% | 66.3% |
| 2aehA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 41.0 | 3.58e-01 | 79.3% | 65.6% |
| 1sq2N00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 46.0 | 3.78e-01 | 93.1% | 68.8% |
| 4x83A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 44.0 | 3.77e-01 | 93.1% | 57.8% |
| 2hpuA02 | 3.30.70.2050 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 46.0 | 4.50e-01 | 94.8% | 100.0% |
| 1m4kA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 42.0 | 3.68e-01 | 93.1% | 60.2% |
| 8os3A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 42.0 | 3.77e-01 | 93.1% | 64.1% |
| 4cvuA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 43.0 | 3.15e-01 | 100.0% | 87.9% |
| 4m0wA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 40.0 | 3.18e-01 | 87.9% | 96.4% |
| 1w99A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 44.0 | 3.15e-01 | 98.3% | 41.4% |
| 2bbhA01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.52 | 37.0 | 2.94e-01 | 81.0% | 77.5% |
| 1uf2C02 | 2.60.120.170 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 37.0 | 2.78e-01 | 77.6% | 53.5% |
| 3ha9A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 40.0 | 3.08e-01 | 91.4% | 46.6% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.52 | 35.0 | 2.71e-01 | 74.1% | 54.8% |
| 3weeA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 40.0 | 2.98e-01 | 94.8% | 95.6% |
| 4ca1B02 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.50 | 38.0 | 3.02e-01 | 84.5% | 76.5% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3686690 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.82 | 69.0 | 6.07e-01 | 93.1% | 97.6% |
| 3723377 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.80 | 67.0 | 5.17e-01 | 93.1% | 66.4% |
| 3285401 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.77 | 69.0 | 6.35e-01 | 100.0% | 93.3% |
| 3923043 | 4326.1.1.1 ↗ | a+b two layers › ERH-like › ERH-like › ERH-like › ER | 0.77 | 69.0 | 5.72e-01 | 100.0% | 91.0% |
| 3672250 | 207.1.1.116 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_FBXL15 | 0.76 | 58.0 | 3.95e-01 | 84.5% | 24.7% |
| 3987692 | 822.3.1.1 ↗ | a+b two layers › GYF/BRK domain-like › conserved domain protein SP_1775 › conserved domain protein SP_1775 › DUF4649 | 0.75 | 67.0 | 6.29e-01 | 100.0% | 85.7% |
| 3288892 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.74 | 52.0 | 5.66e-01 | 81.0% | 95.6% |
| 3661726 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.70 | 53.0 | 4.39e-01 | 81.0% | 83.0% |
| 4231372 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.69 | 49.0 | 4.59e-01 | 74.1% | 100.0% |
| 4448678 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.68 | 50.0 | 4.63e-01 | 79.3% | 98.7% |
| 3508717 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 58.0 | 5.49e-01 | 96.6% | 100.0% |
| 4952123 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.68 | 58.0 | 5.75e-01 | 93.1% | 96.7% |
| 3959440 | 4.1.1.180 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3107 | 0.68 | 48.0 | 4.69e-01 | 75.9% | 100.0% |
| 4946939 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.67 | 56.0 | 3.91e-01 | 94.8% | 89.0% |
| 4147528 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.67 | 47.0 | 4.42e-01 | 74.1% | 98.6% |
| 4995671 | 3115.1.1.12 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › PF30567 | 0.67 | 47.0 | 5.02e-01 | 77.6% | 88.0% |
| 4024040 | 822.1.1.0 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain | 0.67 | 56.0 | 5.49e-01 | 100.0% | 93.8% |
| 3258706 | 812.1.1.0 ↗ | a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain | 0.66 | 51.0 | 3.91e-01 | 84.5% | 36.3% |
| 4014216 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.66 | 57.0 | 3.52e-01 | 100.0% | 20.3% |
| 3704667 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.65 | 56.0 | 3.51e-01 | 96.6% | 47.2% |
| 3968768 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.65 | 46.0 | 4.28e-01 | 75.9% | 96.0% |
| 4158495 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.65 | 49.0 | 4.28e-01 | 82.8% | 87.8% |
| 3282305 | 4187.1.1.0 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like | 0.65 | 52.0 | 4.97e-01 | 94.8% | 77.1% |
| 3968122 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.65 | 44.0 | 4.78e-01 | 75.9% | 93.3% |
| 3675525 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.64 | 50.0 | 4.77e-01 | 94.8% | 73.5% |
| 3235447 | 821.1.1.8 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › ANKLE2_3rd | 0.64 | 51.0 | 4.42e-01 | 87.9% | 98.9% |
| 3612075 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 50.0 | 3.44e-01 | 89.7% | 24.3% |
| 3624908 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.63 | 46.0 | 4.03e-01 | 79.3% | 77.8% |
| 3479367 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.63 | 53.0 | 5.16e-01 | 100.0% | 87.5% |
| 3734369 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.63 | 52.0 | 3.32e-01 | 94.8% | 24.6% |
| 3929133 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 50.0 | 4.27e-01 | 89.7% | 78.9% |
| 4343263 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.62 | 50.0 | 3.98e-01 | 94.8% | 81.5% |
| 3496147 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.62 | 45.0 | 3.80e-01 | 79.3% | 84.0% |
| 3505839 | 375.4.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Nucleolar RNA-binding protein Nop10-like › Nucleolar RNA-binding protein Nop10-like | 0.61 | 41.0 | 4.68e-01 | 74.1% | 100.0% |
| 3604642 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 42.0 | 4.63e-01 | 79.3% | 95.6% |
| 3696767 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.60 | 50.0 | 3.07e-01 | 94.8% | 43.8% |
| 3928714 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 47.0 | 4.13e-01 | 93.1% | 58.9% |
| 3721580 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.59 | 51.0 | 3.28e-01 | 100.0% | 20.4% |
| 3255812 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.58 | 47.0 | 2.93e-01 | 93.1% | 41.1% |
| 4245423 | 1.1.5.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › SecDF_P1_head | 0.57 | 46.0 | 3.72e-01 | 100.0% | 84.4% |
| 3926235 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 49.0 | 4.45e-01 | 100.0% | 73.8% |
| 4975739 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 49.0 | 2.93e-01 | 96.6% | 18.7% |
| 4966853 | 375.1.1.324 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF1922 | 0.56 | 40.0 | 3.70e-01 | 79.3% | 81.2% |
| 5010744 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.55 | 46.0 | 4.44e-01 | 89.7% | 100.0% |
| 3283013 | 3576.1.1.1 ↗ | a+b complex topology › Cas8-like › Cascade subunit CasA/Cse1/Cas8 › Cascade subunit CasA/Cse1/Cas8 › CRISPR_Cse1 | 0.55 | 43.0 | 2.57e-01 | 89.7% | 60.0% |
| 3874527 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 44.0 | 3.90e-01 | 93.1% | 70.0% |
| 5053437 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.55 | 44.0 | 3.21e-01 | 100.0% | 99.5% |
| 4981108 | 375.1.1.331 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF5817 | 0.54 | 39.0 | 4.21e-01 | 77.6% | 100.0% |
| 5080205 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.54 | 38.0 | 3.98e-01 | 77.6% | 92.0% |
| 3462961 | 5.1.4.122 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF295 | 0.54 | 34.0 | 2.28e-01 | 100.0% | 14.5% |
| 3181846 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 40.0 | 3.61e-01 | 91.4% | 97.8% |
| 3420651 | 109.4.1.1521 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, DYW_deaminase, Eplus_motif, E_motif | 0.51 | 42.0 | 2.71e-01 | 100.0% | 37.6% |
| 5009694 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 41.0 | 3.40e-01 | 93.1% | 65.2% |
| 3571636 | 206.1.3.35 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DUF5565 | 0.51 | 43.0 | 2.95e-01 | 100.0% | 68.1% |
| 4028716 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.50 | 41.0 | 3.22e-01 | 94.8% | 76.3% |