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MN276049.1__QEP53272.1__BS46_gp90__00090
Bact-VirMN276049.1__QEP53272.1__BS46_gp90__00090
Identity
- Accession:
- MN276049 ↗
- Kingdom:
- phage
Quality
78.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-43
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2v6eA01 | 1.10.287.3180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 58.0 | 4.86e-01 | 100.0% | 49.3% |
| 2c5iT00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 58.0 | 4.54e-01 | 100.0% | 40.4% |
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 58.0 | 5.32e-01 | 100.0% | 68.4% |
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 55.0 | 5.05e-01 | 100.0% | 64.9% |
| 2efeA01 | 1.10.246.120 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.68 | 58.0 | 4.69e-01 | 100.0% | 60.5% |
| 3ismC01 | 1.25.40.240 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ku, C-terminal domain | 0.67 | 57.0 | 3.83e-01 | 100.0% | 26.0% |
| 2hydA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.66 | 54.0 | 3.21e-01 | 100.0% | 12.4% |
| 3juwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.66 | 57.0 | 3.79e-01 | 100.0% | 30.5% |
| 1dc1A02 | 1.10.238.90 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Restriction endonuclease BsobI, helical domain | 0.64 | 55.0 | 4.36e-01 | 100.0% | 93.2% |
| 4flbA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 46.0 | 3.40e-01 | 100.0% | 26.7% |
| 3ff5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 51.0 | 4.75e-01 | 100.0% | 72.2% |
| 3gzfD00 | 1.10.150.420 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Coronavirus nonstructural protein 4 C-terminus | 0.62 | 45.0 | 3.47e-01 | 95.1% | 35.2% |
| 1l1lA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.62 | 51.0 | 2.89e-01 | 95.1% | 21.1% |
| 3uarA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 47.0 | 3.66e-01 | 100.0% | 36.4% |
| 1iuqA01 | 1.10.1200.50 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glycerol-3-phosphate acyltransferase, alpha helical bundle, N-terminal | 0.61 | 50.0 | 4.25e-01 | 100.0% | 53.9% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.60 | 44.0 | 4.08e-01 | 100.0% | 60.7% |
| 5jtfB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.59 | 47.0 | 3.09e-01 | 87.8% | 25.7% |
| 1s5jA04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.59 | 49.0 | 4.41e-01 | 97.6% | 83.6% |
| 4f3xA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.59 | 45.0 | 2.87e-01 | 100.0% | 13.8% |
| 4i8oA03 | 1.10.8.1130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial toxin RNase RnlA/LsoA, C-terminal Dmd-binding domain | 0.58 | 45.0 | 3.87e-01 | 92.7% | 52.2% |
| 2ycdA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 46.0 | 3.53e-01 | 100.0% | 36.8% |
| 3qqaA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.58 | 48.0 | 4.31e-01 | 100.0% | 66.1% |
| 4l0cA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 41.0 | 2.59e-01 | 95.1% | 12.6% |
| 5hwoA00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.56 | 47.0 | 2.74e-01 | 100.0% | 12.0% |
| 1d8jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 39.0 | 3.21e-01 | 85.4% | 38.3% |
| 3jvoA00 | 1.10.3230.30 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › Phage gp6-like head-tail connector protein | 0.54 | 43.0 | 3.42e-01 | 100.0% | 40.6% |
| 4i9oA00 | 1.10.246.20 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain | 0.54 | 48.0 | 3.86e-01 | 100.0% | 55.1% |
| 1hztA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.54 | 41.0 | 3.00e-01 | 100.0% | 88.2% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3871102 | 601.1.1.135 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DAD | 0.79 | 67.0 | 5.20e-01 | 100.0% | 44.1% |
| 4928759 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.71 | 44.0 | 4.29e-01 | 100.0% | 57.8% |
| 5043880 | 605.4.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein | 0.68 | 57.0 | 4.57e-01 | 100.0% | 48.2% |
| 3915663 | 632.22.1.9 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › Ciart | 0.67 | 54.0 | 4.59e-01 | 100.0% | 52.6% |
| 4960489 | 3602.1.1.0 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain | 0.66 | 55.0 | 4.73e-01 | 100.0% | 58.6% |
| 4998925 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.65 | 54.0 | 4.42e-01 | 100.0% | 49.4% |
| 3964598 | 192.29.1.104 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF4149 | 0.64 | 54.0 | 3.78e-01 | 100.0% | 89.0% |
| 1720496 | 3546.1.1.1 ↗ | alpha arrays › Peroxisomal biogenesis factor 14 N-terminal domain › Peroxisomal biogenesis factor 14 N-terminal domain › Peroxisomal biogenesis factor 14 N-terminal domain › Pex14_N | 0.64 | 49.0 | 4.75e-01 | 97.6% | 72.9% |
| 4013585 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.64 | 52.0 | 4.54e-01 | 100.0% | 58.6% |
| 2998473 | 3546.1.1.0 ↗ | alpha arrays › Peroxisomal biogenesis factor 14 N-terminal domain › Peroxisomal biogenesis factor 14 N-terminal domain › Peroxisomal biogenesis factor 14 N-terminal domain | 0.63 | 49.0 | 4.47e-01 | 100.0% | 63.9% |
| 3968910 | 159.1.2.4 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › MazG-like | 0.63 | 51.0 | 4.05e-01 | 100.0% | 46.3% |
| 3903431 | 101.35.1.29 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › DEK_C | 0.62 | 46.0 | 4.10e-01 | 90.2% | 55.0% |
| 3415935 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.61 | 50.0 | 4.93e-01 | 95.1% | 86.7% |
| 3628378 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.60 | 48.0 | 3.37e-01 | 100.0% | 25.5% |
| 3604595 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.60 | 46.0 | 3.74e-01 | 85.4% | 46.8% |
| 3732113 | 5051.1.1.3 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SSF | 0.59 | 48.0 | 2.92e-01 | 100.0% | 13.3% |
| 3279034 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.58 | 50.0 | 4.07e-01 | 100.0% | 51.2% |
| 3882320 | 101.1.17.19 ↗ | alpha arrays › HTH › HTH › FF domain › DEK_C | 0.55 | 47.0 | 4.23e-01 | 100.0% | 70.0% |