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MN284893.1__QFP94646.1__SEA_LILMCDREAMY_26__00026
Bact-VirMN284893.1__QFP94646.1__SEA_LILMCDREAMY_26__00026
Identity
- Accession:
- MN284893 ↗
- Kingdom:
- phage
Quality
85.6
mean pLDDT
Taxonomy
TaxID: 2652422
Cluster
View cluster (81 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 27-120
Domain cluster:
rep: MF477236.1__ASU00811.1__NTR1_50__00050__D228-315
D2
high
residues 122-204
Domain cluster:
rep: MF477236.1__ASU00811.1__NTR1_50__00050__D322-403
D3
medium
residues 224-362
Domain cluster:
rep: OR234010.1__WNV46935.1__LPLmcIH19_0018__00018__D196-362
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5i7pA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.72 | 28.0 | 4.49e-01 | 87.8% | 100.0% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.65 | 34.0 | 3.20e-01 | 94.2% | 40.8% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.63 | 36.0 | 4.28e-01 | 95.0% | 81.1% |
| 7cayA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.62 | 33.0 | 3.90e-01 | 92.8% | 73.0% |
| 1vloA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.61 | 27.0 | 3.29e-01 | 87.1% | 60.4% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.60 | 31.0 | 3.52e-01 | 92.1% | 64.4% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.60 | 33.0 | 3.75e-01 | 92.8% | 70.5% |
| 1yloE02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.59 | 28.0 | 3.48e-01 | 92.8% | 71.4% |
| 1b23P03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 30.0 | 3.57e-01 | 89.2% | 71.3% |
| 2crvA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 28.0 | 3.38e-01 | 91.4% | 74.2% |
| 1g3pA02 | 3.90.450.1 | Alpha Beta › Alpha-Beta Complex › Minor Coat Protein; domain 2 › Minor Coat Protein; Domain 2 | 0.54 | 28.0 | 3.17e-01 | 92.1% | 64.4% |
| 2vlgC00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 32.0 | 3.69e-01 | 93.5% | 86.3% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.51 | 30.0 | 3.43e-01 | 95.0% | 76.1% |
| 6baoA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 31.0 | 3.11e-01 | 95.7% | 58.7% |
| 3slzA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.50 | 23.0 | 2.54e-01 | 91.4% | 50.9% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3589736 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 34.0 | 4.74e-01 | 89.2% | 92.9% |
| 4966530 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.69 | 31.0 | 4.35e-01 | 88.5% | 85.7% |
| 3166182 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.69 | 33.0 | 4.02e-01 | 92.8% | 70.0% |
| 5056723 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 34.0 | 4.05e-01 | 95.0% | 69.5% |
| 4647050 | 1.1.13.56 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › YQBQ | 0.68 | 34.0 | 4.33e-01 | 93.5% | 81.2% |
| 4952364 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.68 | 33.0 | 4.12e-01 | 94.2% | 75.3% |
| 5056905 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.67 | 34.0 | 4.19e-01 | 95.0% | 75.6% |
| 4299010 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 33.0 | 3.95e-01 | 93.5% | 68.4% |
| 5055336 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.67 | 32.0 | 3.93e-01 | 89.9% | 71.1% |
| 4608778 | 1.1.7.107 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 | 0.67 | 34.0 | 3.70e-01 | 92.8% | 57.5% |
| 5026244 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 32.0 | 3.94e-01 | 94.2% | 72.2% |
| 4391792 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.65 | 31.0 | 3.74e-01 | 91.4% | 66.3% |
| 4991187 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 36.0 | 4.29e-01 | 95.0% | 78.9% |
| 3968971 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.65 | 33.0 | 4.00e-01 | 92.8% | 74.4% |
| 4565791 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.64 | 32.0 | 3.97e-01 | 93.5% | 74.4% |
| 3725596 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.64 | 31.0 | 3.31e-01 | 93.5% | 52.8% |
| 3949052 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 31.0 | 3.77e-01 | 92.1% | 71.1% |
| 3511358 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 37.0 | 4.38e-01 | 94.2% | 82.0% |
| 3720023 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 33.0 | 3.87e-01 | 95.0% | 71.0% |
| 4982501 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 32.0 | 3.89e-01 | 94.2% | 73.7% |
| 3267872 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 32.0 | 3.30e-01 | 92.1% | 53.1% |
| 3968713 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.61 | 32.0 | 3.93e-01 | 92.1% | 78.9% |
| 3676128 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.61 | 30.0 | 3.34e-01 | 89.2% | 57.4% |
| 3603127 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.60 | 32.0 | 3.94e-01 | 91.4% | 80.0% |
| 5051220 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 28.0 | 3.33e-01 | 92.8% | 67.8% |
| 3941539 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.57 | 39.0 | 4.41e-01 | 93.5% | 93.3% |
| 3256764 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 34.0 | 3.55e-01 | 93.5% | 64.6% |
| 1914511 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.55 | 36.0 | 3.75e-01 | 95.0% | 72.4% |
| 4247994 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.54 | 33.0 | 3.85e-01 | 92.1% | 85.0% |
| 5037458 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 36.0 | 3.86e-01 | 94.2% | 80.0% |
| 4379249 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.50 | 34.0 | 3.62e-01 | 94.2% | 77.6% |