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MN310543.1__QFG04705.1__SEA_CHICKENKING_35__00035

Bact-Vir

MN310543.1__QFG04705.1__SEA_CHICKENKING_35__00035

Identity

Accession:
MN310543 ↗
Kingdom:
phage

Quality

74.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-131
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 36.0 4.37e-01 97.2% 65.3%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 35.0 4.34e-01 98.1% 76.2%
1dgsA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 48.0 5.60e-01 97.2% 100.0%
3f1zI00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 52.0 5.04e-01 97.2% 70.7%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 33.0 4.10e-01 98.1% 76.2%
2w38A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.67 36.0 2.55e-01 92.5% 17.8%
2cwaA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 50.0 5.02e-01 99.1% 78.9%
1pfsA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 46.0 5.17e-01 99.1% 100.0%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 32.0 3.89e-01 98.1% 72.7%
3f2bA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 48.0 5.03e-01 99.1% 86.5%
4owwB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 46.0 4.66e-01 99.1% 74.8%
2k5vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 46.0 4.81e-01 100.0% 81.6%
4gs3A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 48.0 5.11e-01 100.0% 94.4%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 47.0 4.63e-01 100.0% 74.1%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 51.0 5.06e-01 99.1% 87.3%
1ue6D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 49.0 4.97e-01 100.0% 88.5%
8aa9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 48.0 4.74e-01 100.0% 79.8%
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 34.0 3.95e-01 94.3% 78.7%
5odnC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 48.0 4.90e-01 99.1% 91.2%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 47.0 4.69e-01 99.1% 85.6%
2vl6A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 47.0 4.70e-01 99.1% 86.6%
1ae2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 43.0 4.68e-01 97.2% 100.0%
4bgjA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 49.0 4.76e-01 95.3% 94.9%
1h6hA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 47.0 4.26e-01 91.5% 88.1%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 48.0 4.51e-01 94.3% 95.4%
2hqsA01 3.40.50.10070 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TolB, N-terminal domain 0.55 34.0 3.10e-01 96.2% 44.4%
7x7zA01 2.40.480.10 Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like 0.55 42.0 3.83e-01 81.1% 97.1%
1ocsA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 46.0 4.28e-01 92.5% 95.5%
7kx7A03 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 36.0 2.89e-01 95.3% 34.0%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 45.0 4.28e-01 90.6% 91.1%
2i4kA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 44.0 4.20e-01 91.5% 98.4%
1vqqA01 3.10.450.100 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 0.53 33.0 3.37e-01 91.5% 61.5%
4ikbA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.53 44.0 4.15e-01 92.5% 93.8%
2vw9B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 45.0 4.53e-01 99.1% 96.2%
3f6gA02 3.30.160.340 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 30.0 3.69e-01 79.2% 96.8%
1ar0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 31.0 2.98e-01 90.6% 50.4%
3hpcX00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.51 42.0 3.77e-01 90.6% 92.3%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 36.0 3.14e-01 73.6% 78.3%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 36.0 3.29e-01 73.6% 83.8%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4033192 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 71.0 6.59e-01 100.0% 82.3%
143390 2.24.1.1 beta barrels › OB-fold › probable receptor YhhM › probable receptor YhhM › DUF2500 0.76 50.0 5.72e-01 99.1% 92.1%
3969377 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 46.0 5.35e-01 96.2% 87.8%
4102465 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 50.0 5.13e-01 100.0% 71.2%
1954221 2.26.1.1 beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 0.73 50.0 5.84e-01 99.1% 98.7%
4528707 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.72 53.0 5.27e-01 100.0% 73.6%
5074611 2.26.1.1 beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 0.71 52.0 5.85e-01 99.1% 100.0%
4238204 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.71 52.0 5.29e-01 100.0% 78.1%
3385523 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 51.0 5.09e-01 99.1% 72.7%
3876051 2.1.1.44 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 0.70 49.0 5.41e-01 97.2% 90.6%
4642580 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 51.0 5.16e-01 100.0% 77.1%
3387410 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 53.0 5.18e-01 100.0% 74.8%
4479389 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.69 51.0 5.04e-01 100.0% 72.2%
3990098 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.69 50.0 5.00e-01 100.0% 73.6%
5042375 2.26.1.1 beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 0.69 47.0 5.51e-01 95.3% 100.0%
3497521 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.68 56.0 5.25e-01 100.0% 71.5%
3384331 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 46.0 5.02e-01 95.3% 85.9%
4680169 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.68 50.0 5.09e-01 100.0% 78.1%
3602923 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 47.0 4.86e-01 99.1% 76.0%
4547854 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 52.0 5.14e-01 98.1% 79.1%
4932581 2.1.1.12 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S28e 0.67 38.0 4.70e-01 94.3% 90.8%
4032678 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.67 49.0 5.02e-01 100.0% 81.0%
3252847 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 47.0 5.22e-01 95.3% 91.8%
3250428 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 47.0 4.24e-01 95.3% 53.8%
3279764 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 43.0 5.07e-01 96.2% 100.0%
3593900 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 46.0 5.09e-01 95.3% 90.6%
3296674 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.65 52.0 5.16e-01 99.1% 81.8%
3314558 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.65 52.0 4.70e-01 99.1% 63.2%
5032255 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 37.0 4.44e-01 90.6% 85.7%
5000502 2.1.1.12 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S28e 0.65 38.0 4.17e-01 90.6% 71.8%
5050059 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 49.0 4.85e-01 99.1% 75.7%
3658019 2.1.1.285 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB3, CDC24_OB2 0.64 50.0 3.61e-01 99.1% 29.7%
152653 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.63 48.0 5.11e-01 100.0% 94.4%
3374948 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.62 50.0 5.19e-01 99.1% 91.0%
4982481 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 45.0 4.78e-01 96.2% 85.3%
4929168 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.62 52.0 4.98e-01 100.0% 80.0%
3882652 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 49.0 4.65e-01 100.0% 71.5%
3926984 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.61 42.0 3.41e-01 71.7% 42.0%
3994138 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.61 55.0 4.79e-01 100.0% 65.6%
3808110 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.60 51.0 4.57e-01 99.1% 65.3%
5004108 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 46.0 4.72e-01 98.1% 86.0%
3612666 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 50.0 4.75e-01 99.1% 75.4%
3443030 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.59 37.0 4.22e-01 94.3% 83.7%
5031820 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.59 43.0 4.16e-01 86.8% 67.5%
3550844 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.59 48.0 4.20e-01 88.7% 87.5%
2541776 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.58 48.0 4.79e-01 99.1% 87.2%
146266 295.1.1.8 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3276 0.58 34.0 3.77e-01 95.3% 71.4%
4228716 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.58 48.0 4.49e-01 91.5% 97.0%
5032193 2.26.1.1 beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 0.57 52.0 5.23e-01 98.1% 100.0%
4232994 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.57 47.0 4.70e-01 99.1% 88.2%
3193911 389.1.3.0 few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.57 40.0 4.40e-01 97.2% 91.8%
3357183 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.57 47.0 4.13e-01 90.6% 77.5%
3741279 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.56 48.0 4.37e-01 92.5% 88.6%
4001702 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 47.0 4.66e-01 99.1% 85.2%
3255112 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.56 46.0 4.55e-01 99.1% 82.6%
3287503 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.55 50.0 4.61e-01 100.0% 83.0%
3791987 2.1.1.25 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 0.55 47.0 4.58e-01 100.0% 87.0%
3698360 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.55 46.0 3.95e-01 92.5% 73.5%
3781935 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.54 47.0 4.47e-01 95.3% 98.4%
3564807 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.54 45.0 4.00e-01 91.5% 79.4%
3407245 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.54 46.0 4.35e-01 93.4% 91.2%
3614177 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.54 44.0 3.97e-01 89.6% 88.0%
4181914 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.54 49.0 4.51e-01 100.0% 94.1%
3841771 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.54 45.0 4.06e-01 92.5% 82.7%
4124146 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.53 46.0 4.12e-01 97.2% 86.5%
3537881 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.53 45.0 3.97e-01 94.3% 83.0%
3894481 277.1.1.5 a+b two layers › PX domain › PX domain › PX domain › Vps5 0.53 44.0 3.10e-01 91.5% 35.4%
3643907 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.53 44.0 3.85e-01 90.6% 75.6%
4030635 1.1.7.2 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L3 0.52 42.0 3.15e-01 84.9% 82.8%
4972474 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 46.0 2.85e-01 99.1% 24.7%
4012805 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.52 43.0 4.07e-01 91.5% 90.8%
3180376 109.3.1.11 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_5 0.52 43.0 2.90e-01 92.5% 26.9%
3636081 4972.1.1.1 beta barrels › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › DUF917_C 0.52 42.0 3.77e-01 89.6% 86.9%
4127062 1.1.7.2 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L3 0.51 42.0 3.26e-01 88.7% 97.9%
4072295 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.51 45.0 3.07e-01 97.2% 85.3%
3903091 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.51 44.0 3.04e-01 96.2% 86.2%