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MN310546.1__QFG04950.1__SEA_PHRIEDRICE_28__00028
Bact-VirMN310546.1__QFG04950.1__SEA_PHRIEDRICE_28__00028
Identity
- Accession:
- MN310546 ↗
- Kingdom:
- phage
Quality
93.0
mean pLDDT
Taxonomy
TaxID: 2652407
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 5-73
Domain cluster:
rep: rifoxyd1_full_scaffold_5_prodigal-single.1__X__X__00114__D11-75
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qr0A01 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.73 | 47.0 | 3.84e-01 | 73.9% | 36.0% |
| 3p1tA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.68 | 46.0 | 3.29e-01 | 71.0% | 83.5% |
| 1eluA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.61 | 45.0 | 3.05e-01 | 79.7% | 69.7% |
| 6a6eA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.59 | 42.0 | 2.84e-01 | 75.4% | 70.1% |
| 1in0A02 | 3.30.70.990 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YajQ-like, domain 2 | 0.54 | 38.0 | 3.44e-01 | 73.9% | 57.6% |
| 3ddcB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 38.0 | 3.16e-01 | 79.7% | 98.5% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3284572 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.80 | 55.0 | 3.59e-01 | 72.5% | 60.4% |
| 3392569 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.72 | 64.0 | 5.10e-01 | 94.2% | 60.8% |
| 4953135 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.71 | 62.0 | 4.76e-01 | 94.2% | 69.7% |
| 3980136 | 243.3.1.21 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YsaB | 0.67 | 46.0 | 4.47e-01 | 71.0% | 65.3% |
| 5040572 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.64 | 44.0 | 2.70e-01 | 71.0% | 54.5% |
| 3685670 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 44.0 | 2.72e-01 | 84.1% | 16.5% |
| 3725104 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 46.0 | 2.80e-01 | 100.0% | 48.6% |
| 4970001 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.51 | 44.0 | 2.74e-01 | 95.7% | 18.0% |