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MN369756.1__QGH79709.1__SEA_ANON_38__00037
Bact-VirMN369756.1__QGH79709.1__SEA_ANON_38__00037
Identity
- Accession:
- MN369756 ↗
- Kingdom:
- phage
Quality
77.1
mean pLDDT
Taxonomy
TaxID: 2653744
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-60
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qt2A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 44.0 | 3.52e-01 | 87.3% | 32.7% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.68 | 34.0 | 3.35e-01 | 92.7% | 43.3% |
| 5xyiU00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.67 | 48.0 | 3.94e-01 | 74.5% | 59.8% |
| 4mh4A02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.61 | 45.0 | 3.91e-01 | 100.0% | 48.9% |
| 2znhA03 | 6.20.40.10 | Special › Other non-globular › Porin MspA ribbon fold › | 0.60 | 44.0 | 4.62e-01 | 81.8% | 93.6% |
| 2gtlN02 | 2.40.128.620 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 41.0 | 3.02e-01 | 96.4% | 24.7% |
| 2xzmJ00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.56 | 47.0 | 3.94e-01 | 100.0% | 57.1% |
| 7s7rA01 | 2.60.40.2860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 48.0 | 3.64e-01 | 100.0% | 55.7% |
| 1v8cA02 | 3.30.1370.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain | 0.55 | 42.0 | 3.79e-01 | 100.0% | 58.7% |
| 6tmfM00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.55 | 46.0 | 3.88e-01 | 100.0% | 56.9% |
| 4inaA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 47.0 | 3.24e-01 | 100.0% | 84.3% |
| 2ek0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.54 | 37.0 | 3.29e-01 | 100.0% | 45.6% |
| 1jpyX00 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.53 | 35.0 | 2.82e-01 | 100.0% | 32.5% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.53 | 36.0 | 2.96e-01 | 96.4% | 33.6% |
| 4k3cA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.53 | 45.0 | 4.04e-01 | 100.0% | 82.9% |
| 1fi8C00 | 2.60.40.550 | Mainly Beta › Sandwich › Immunoglobulin-like › Ecotin | 0.53 | 34.0 | 3.12e-01 | 96.4% | 46.2% |
| 3mjkA00 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.52 | 40.0 | 3.14e-01 | 87.3% | 96.1% |
| 2fdoA00 | 3.30.1970.10 | Alpha Beta › 2-Layer Sandwich › AF2331-like fold › AF2331-like | 0.52 | 35.0 | 3.09e-01 | 72.7% | 45.2% |
| 3bzwF00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.52 | 39.0 | 2.73e-01 | 90.9% | 43.6% |
| 6lofA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.52 | 43.0 | 3.19e-01 | 98.2% | 96.9% |
| 1xeuA02 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 36.0 | 3.18e-01 | 74.5% | 92.8% |
| 2p35A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 42.0 | 3.08e-01 | 100.0% | 39.1% |
| 3hm2A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 38.0 | 2.79e-01 | 100.0% | 28.1% |
| 1nbwA02 | 3.90.470.30 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Coenzyme B12-Dependent Enzyme linker domain | 0.50 | 41.0 | 3.20e-01 | 100.0% | 70.6% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3717169 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.83 | 49.0 | 3.25e-01 | 80.0% | 16.5% |
| 3551688 | 59.1.1.7 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Tau95_N | 0.68 | 46.0 | 3.60e-01 | 87.3% | 33.0% |
| 3472421 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.67 | 42.0 | 3.20e-01 | 83.6% | 26.2% |
| 3969252 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.67 | 48.0 | 3.66e-01 | 100.0% | 31.9% |
| 3397147 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.63 | 43.0 | 3.22e-01 | 89.1% | 27.6% |
| 3761138 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.63 | 38.0 | 2.98e-01 | 85.5% | 27.8% |
| 4156749 | 3234.1.1.2 ↗ | a+b two layers › GerBC protein › GerBC protein › GerBC protein › Spore_GerAC, Spore_GerAC_N | 0.59 | 45.0 | 2.88e-01 | 98.2% | 16.1% |
| 3717787 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.59 | 47.0 | 2.81e-01 | 94.5% | 11.9% |
| 4983910 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.59 | 44.0 | 3.34e-01 | 80.0% | 58.5% |
| 4864574 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.58 | 41.0 | 4.28e-01 | 87.3% | 80.4% |
| 4856794 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.58 | 40.0 | 3.58e-01 | 98.2% | 51.9% |
| 3593809 | 304.31.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase | 0.57 | 49.0 | 3.99e-01 | 100.0% | 64.5% |
| 4126255 | 4967.1.1.25 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2+MatK_N | 0.56 | 39.0 | 2.52e-01 | 72.7% | 27.6% |
| 4197190 | 812.1.1.1 ↗ | a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE | 0.56 | 39.0 | 3.88e-01 | 100.0% | 70.0% |
| 5035417 | 3010.1.1.0 ↗ | a/b three-layered sandwiches › C-terminal subdomain in Lon-related proteases catalytic domains › C-terminal subdomain in Lon-related proteases catalytic domains › C-terminal subdomain in Lon-related proteases catalytic domains | 0.56 | 44.0 | 3.76e-01 | 89.1% | 78.9% |
| 3598322 | 2487.1.1.0 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" | 0.56 | 43.0 | 3.16e-01 | 96.4% | 32.9% |
| 5068820 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 46.0 | 4.17e-01 | 94.5% | 93.3% |
| 4997962 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.54 | 46.0 | 2.98e-01 | 96.4% | 94.2% |
| 4862327 | 304.44.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 | 0.54 | 46.0 | 4.02e-01 | 100.0% | 68.2% |
| 4666185 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.52 | 36.0 | 2.22e-01 | 74.5% | 46.3% |
| 3251044 | 242.1.1.2 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 | 0.52 | 33.0 | 2.52e-01 | 98.2% | 23.4% |
| 3706357 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.51 | 42.0 | 2.91e-01 | 100.0% | 59.6% |
| 3912477 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.51 | 43.0 | 2.69e-01 | 96.4% | 33.8% |
| 3173251 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.50 | 43.0 | 3.05e-01 | 96.4% | 49.4% |