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MN369762.1__QGH80392.1__SEA_BRYLER_16__00015
Bact-VirMN369762.1__QGH80392.1__SEA_BRYLER_16__00015
Identity
- Accession:
- MN369762 ↗
- Kingdom:
- phage
Quality
72.0
mean pLDDT
Taxonomy
TaxID: 2653755
Cluster
View cluster (33 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-135
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.72 | 43.0 | 4.38e-01 | 85.1% | 59.6% |
| 1usmA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.69 | 39.0 | 4.25e-01 | 96.8% | 67.5% |
| 6fucA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.69 | 44.0 | 4.58e-01 | 100.0% | 70.9% |
| 4qjvB00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.68 | 43.0 | 4.34e-01 | 98.9% | 63.8% |
| 2oikA00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.66 | 50.0 | 4.38e-01 | 100.0% | 54.7% |
| 2ebbA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.65 | 39.0 | 3.94e-01 | 97.9% | 57.3% |
| 4aqcB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.65 | 46.0 | 4.67e-01 | 100.0% | 74.0% |
| 2pa8D01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.65 | 38.0 | 3.90e-01 | 97.9% | 60.2% |
| 6lpnA04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 37.0 | 3.73e-01 | 77.7% | 54.7% |
| 3dmeA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.64 | 38.0 | 3.25e-01 | 91.5% | 36.6% |
| 2v4jA02 | 3.30.70.2500 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 43.0 | 4.25e-01 | 97.9% | 66.3% |
| 2kx2A00 | 3.30.780.30 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › | 0.62 | 37.0 | 3.69e-01 | 100.0% | 56.2% |
| 3vg8A00 | 3.30.200.270 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.61 | 45.0 | 4.39e-01 | 100.0% | 69.5% |
| 3bm7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 39.0 | 3.77e-01 | 87.2% | 58.5% |
| 2cpxA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 34.0 | 3.61e-01 | 77.7% | 63.3% |
| 1fm2B03 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.59 | 25.0 | 2.91e-01 | 96.8% | 51.5% |
| 3lpxB02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.57 | 37.0 | 3.78e-01 | 100.0% | 66.0% |
| 3lvtA03 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 45.0 | 4.12e-01 | 96.8% | 65.1% |
| 3aa0B01 | 1.20.58.570 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › F-actin capping protein, alpha/beta subunit, N-terminal domain | 0.56 | 28.0 | 2.91e-01 | 72.3% | 51.1% |
| 3kewB02 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.56 | 48.0 | 4.27e-01 | 100.0% | 77.8% |
| 2w1zA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 47.0 | 4.16e-01 | 98.9% | 65.2% |
| 4jrnA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 47.0 | 4.16e-01 | 100.0% | 66.7% |
| 2du7A02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 48.0 | 3.66e-01 | 100.0% | 51.3% |
| 4esqA00 | 3.40.1000.70 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain | 0.54 | 48.0 | 3.84e-01 | 100.0% | 59.3% |
| 1g0hA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.53 | 37.0 | 3.31e-01 | 72.3% | 85.4% |
| 4w64B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.52 | 44.0 | 3.84e-01 | 98.9% | 79.4% |
| 2zdiC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 34.0 | 2.94e-01 | 71.3% | 42.6% |
| 2q7eA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 44.0 | 3.46e-01 | 100.0% | 49.1% |
| 3gasB02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 43.0 | 3.64e-01 | 98.9% | 58.9% |
| 3tvjB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.50 | 36.0 | 3.50e-01 | 97.9% | 66.4% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3390313 | 304.4.1.53 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › R1_ABCA1 | 0.74 | 42.0 | 4.42e-01 | 87.2% | 61.2% |
| 4162122 | 2006.1.1.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP | 0.70 | 48.0 | 3.38e-01 | 98.9% | 23.6% |
| 5006953 | 873.1.1.12 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › PF27313 | 0.70 | 44.0 | 4.38e-01 | 100.0% | 60.0% |
| 3217898 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.69 | 47.0 | 3.23e-01 | 100.0% | 20.8% |
| 3281355 | 304.12.1.12 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › GDH_ACT2 | 0.65 | 44.0 | 4.33e-01 | 100.0% | 62.9% |
| 3307398 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.64 | 43.0 | 4.16e-01 | 100.0% | 60.0% |
| 3308868 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.64 | 42.0 | 4.09e-01 | 100.0% | 60.0% |
| 4050380 | 1.1.7.95 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25990 | 0.63 | 45.0 | 4.54e-01 | 97.9% | 74.7% |
| 4972277 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.63 | 42.0 | 4.44e-01 | 100.0% | 80.0% |
| 3935080 | 206.1.1.72 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal | 0.62 | 42.0 | 2.98e-01 | 100.0% | 21.3% |
| 3697768 | 872.4.1.0 ↗ | a+b two layers › Dodecin subunit-like › YdgH-like › YdgH-like | 0.62 | 31.0 | 4.01e-01 | 75.5% | 95.6% |
| 4120506 | 243.11.1.4 ↗ | a+b two layers › Cystatin-like › NP_346341.1 protein › NP_346341.1 protein › PF29632 | 0.61 | 28.0 | 2.98e-01 | 74.5% | 47.5% |
| 3941958 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 41.0 | 4.18e-01 | 85.1% | 71.1% |
| 4257969 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 46.0 | 4.20e-01 | 97.9% | 59.7% |
| 5066391 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.61 | 44.0 | 3.89e-01 | 96.8% | 51.4% |
| 4966560 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.55 | 49.0 | 3.60e-01 | 100.0% | 43.5% |
| 3580664 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 37.0 | 2.65e-01 | 100.0% | 21.0% |
| 5052888 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 46.0 | 4.26e-01 | 100.0% | 70.4% |
| 3936663 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 45.0 | 4.18e-01 | 97.9% | 69.6% |
| 3690865 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 47.0 | 3.82e-01 | 100.0% | 58.4% |
| 3601331 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 46.0 | 3.78e-01 | 100.0% | 67.4% |
| 3955095 | 881.1.1.8 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PknH_C | 0.52 | 47.0 | 3.70e-01 | 100.0% | 59.3% |
| 4248513 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 40.0 | 3.64e-01 | 100.0% | 61.5% |
| 4240628 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.51 | 42.0 | 3.27e-01 | 92.6% | 65.9% |
| 3368654 | 60.1.1.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › SPOC | 0.51 | 44.0 | 3.89e-01 | 100.0% | 84.8% |
| 3675614 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.50 | 39.0 | 3.35e-01 | 100.0% | 50.6% |