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MN399336.1__QFP93520.1__X__00026
Bact-VirMN399336.1__QFP93520.1__X__00026
Identity
- Accession:
- MN399336 ↗
- Kingdom:
- phage
Quality
80.3
mean pLDDT
Taxonomy
TaxID: 2651067
Cluster
View cluster (57 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-145
Domain cluster:
rep: NC_054464.1__YP_010052824.1__KE334_gp13__00013__D42-153
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23961.2 best | Phage_tail_terminator_9 | 58.6 | 8.60e-16 | 100.0% | 83.7% |
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4acvA00 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.76 | 57.0 | 6.26e-01 | 99.3% | 93.3% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.72 | 68.0 | 5.89e-01 | 100.0% | 79.5% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.72 | 47.0 | 5.53e-01 | 98.6% | 94.9% |
| 6toaF01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.71 | 59.0 | 6.21e-01 | 97.9% | 96.9% |
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.69 | 57.0 | 6.00e-01 | 97.9% | 97.7% |
| 2vqeE01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.68 | 24.0 | 3.60e-01 | 86.0% | 71.9% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.68 | 58.0 | 5.94e-01 | 100.0% | 96.3% |
| 2y3uA02 | 3.30.980.50 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.66 | 46.0 | 5.08e-01 | 99.3% | 89.4% |
| 2l25A00 | 3.30.2000.20 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.66 | 57.0 | 5.74e-01 | 98.6% | 93.6% |
| 3eniC00 | 2.50.10.10 | Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A | 0.66 | 55.0 | 4.10e-01 | 89.5% | 44.9% |
| 2ek0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.63 | 35.0 | 4.33e-01 | 90.2% | 86.7% |
| 2nyiA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 34.0 | 4.14e-01 | 83.9% | 83.3% |
| 2k75A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 25.0 | 2.92e-01 | 100.0% | 51.5% |
| 6vh5C03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 34.0 | 4.09e-01 | 88.1% | 85.4% |
| 1k8kD01 | 3.30.1460.20 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.60 | 39.0 | 3.90e-01 | 85.3% | 62.3% |
| 4bfeA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 29.0 | 3.61e-01 | 86.0% | 75.3% |
| 3dxpA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 32.0 | 3.77e-01 | 80.4% | 75.3% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 31.0 | 3.72e-01 | 86.7% | 76.1% |
| 3pyfA01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.59 | 33.0 | 3.20e-01 | 79.0% | 47.8% |
| 3i4hX01 | 3.30.70.1890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 40.0 | 4.23e-01 | 86.0% | 80.5% |
| 4e98C00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 36.0 | 4.03e-01 | 91.6% | 83.8% |
| 3ahpA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 36.0 | 4.00e-01 | 91.6% | 83.0% |
| 1g5hA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.55 | 50.0 | 3.95e-01 | 97.9% | 78.9% |
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.54 | 45.0 | 4.59e-01 | 98.6% | 93.4% |
| 3cfuA00 | 2.60.40.1240 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 40.0 | 4.02e-01 | 86.7% | 75.7% |
| 2ktyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 35.0 | 3.62e-01 | 81.1% | 70.9% |
| 1usyC00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.52 | 46.0 | 3.73e-01 | 97.2% | 98.5% |
| 1rtzA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.52 | 37.0 | 3.66e-01 | 95.1% | 69.1% |
| 1dpbA00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.52 | 37.0 | 3.11e-01 | 74.1% | 70.0% |
| 4afhE00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.52 | 46.0 | 4.05e-01 | 97.9% | 78.3% |
| 2v8pA01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.51 | 32.0 | 3.12e-01 | 96.5% | 56.1% |
| 3l4gC04 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 46.0 | 3.75e-01 | 100.0% | 95.3% |
| 1ekrA00 | 3.30.70.640 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Molybdopterin cofactor biosynthesis C (MoaC) domain | 0.51 | 35.0 | 3.54e-01 | 92.3% | 69.9% |
| 3qkbA00 | 3.30.110.70 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B | 0.50 | 32.0 | 3.86e-01 | 92.3% | 97.9% |
| 3lvtA03 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 33.0 | 3.44e-01 | 94.4% | 72.1% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3970985 | 304.124.1.9 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 | 0.86 | 79.0 | 8.07e-01 | 99.3% | 98.6% |
| 3948250 | 304.124.1.9 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 | 0.83 | 78.0 | 7.59e-01 | 100.0% | 92.9% |
| 3949263 | 304.124.1.9 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 | 0.79 | 57.0 | 6.56e-01 | 89.5% | 100.0% |
| 5004177 | 304.124.1.3 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › DUF3168 | 0.78 | 64.0 | 6.84e-01 | 97.9% | 97.6% |
| 4957584 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.78 | 59.0 | 6.50e-01 | 97.9% | 96.5% |
| 3585212 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.76 | 72.0 | 6.18e-01 | 100.0% | 89.8% |
| 3972055 | 11.1.1.410 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BatD | 0.73 | 41.0 | 4.47e-01 | 77.6% | 65.0% |
| 2642577 | 304.124.1.3 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › DUF3168 | 0.71 | 60.0 | 6.19e-01 | 98.6% | 94.8% |
| 5040945 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.71 | 64.0 | 6.37e-01 | 100.0% | 93.3% |
| 3640057 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.71 | 37.0 | 3.24e-01 | 100.0% | 33.5% |
| 4954550 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.70 | 50.0 | 5.47e-01 | 98.6% | 91.3% |
| 364035 | 304.124.1.1 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_U | 0.68 | 58.0 | 6.00e-01 | 98.6% | 97.0% |
| 4928893 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.67 | 60.0 | 6.05e-01 | 98.6% | 95.2% |
| 140398 | 304.124.1.4 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › DUF4128 | 0.66 | 57.0 | 5.74e-01 | 98.6% | 93.6% |
| 5078308 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.65 | 55.0 | 5.65e-01 | 99.3% | 95.6% |
| 3496210 | 11.12.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like | 0.64 | 44.0 | 4.05e-01 | 90.2% | 54.6% |
| 3213160 | 11.12.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like | 0.61 | 43.0 | 3.92e-01 | 81.1% | 55.7% |
| 3164699 | 1.1.13.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N | 0.60 | 46.0 | 5.05e-01 | 97.2% | 99.1% |
| 3284250 | 706.2.1.0 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.58 | 31.0 | 3.89e-01 | 86.0% | 88.7% |
| 3478389 | 825.1.1.2 ↗ | beta complex topology › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins › ETX_MTX2 | 0.56 | 49.0 | 3.98e-01 | 93.0% | 94.0% |
| 4957560 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.55 | 44.0 | 4.66e-01 | 95.1% | 93.8% |
| 4965879 | 881.1.1.44 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF6517 | 0.54 | 44.0 | 4.04e-01 | 86.0% | 87.6% |
| 167355 | 11.4.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › DUF4352 | 0.54 | 40.0 | 4.02e-01 | 86.7% | 75.7% |
| 4888732 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.54 | 45.0 | 4.45e-01 | 98.6% | 83.3% |
| 3274193 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 39.0 | 2.40e-01 | 86.0% | 12.7% |
| 2674670 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.53 | 46.0 | 4.30e-01 | 97.9% | 76.7% |
| 5077058 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.53 | 31.0 | 3.31e-01 | 79.7% | 64.0% |
| 3588078 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.52 | 33.0 | 4.01e-01 | 92.3% | 100.0% |
| 3878682 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.52 | 44.0 | 3.89e-01 | 91.6% | 99.0% |
| 3644486 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.52 | 48.0 | 4.46e-01 | 100.0% | 89.1% |
| 3384696 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.51 | 47.0 | 4.39e-01 | 100.0% | 88.4% |
| 3327314 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 47.0 | 3.17e-01 | 100.0% | 29.6% |
| 5047554 | 241.1.1.5 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF2299 | 0.50 | 32.0 | 3.18e-01 | 84.6% | 60.0% |